------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 256 1b00_A) ( 6 1a04_A) 0.9994 0.9087 3.5350 ( 0 24 45) 0 0.9994 0.9087 10 11 ( 256 1b00_A) ( 26 1a2o_A) 0.9998 0.9998 2.6693 ( 0 25 45) 0 0.9998 0.9998 10 10 ( 256 1b00_A) ( 90 1a9x_B) 0.9904 0.5550 3.9149 ( 1 23 45) 0 0.9904 0.5550 10 18 ( 256 1b00_A) ( 256 1b00_A) 1.0000 1.0000 0.0000 ( 0 27 45) 0 1.0000 1.0000 10 10 ( 256 1b00_A) ( 266 1b1c_A) 0.8982 0.8171 5.3126 ( 0 14 36) 0 0.9965 0.9069 10 11 ( 256 1b00_A) ( 428 1bmt_A) 0.9990 0.9085 4.0213 ( 0 24 45) 0 0.9990 0.9085 10 11 ( 256 1b00_A) ( 477 1bvy_F) 0.7995 0.8881 4.4211 ( 0 13 28) 0 0.7999 0.8887 10 9 ( 256 1b00_A) ( 523 1c4k_A) 0.6998 0.8745 3.9799 ( 0 10 21) 0 0.7993 0.9980 10 8 ( 256 1b00_A) ( 562 1ccw_A) 0.8998 0.8998 3.1521 ( 0 17 36) 0 0.8998 0.8998 10 10 ( 256 1b00_A) ( 745 1d4a_A) 0.7987 0.5332 5.6918 ( 0 13 28) 0 0.9836 0.6644 10 15 ( 256 1b00_A) ( 786 1dbw_A) 0.9998 0.9998 2.6795 ( 0 21 45) 0 0.9998 0.9998 10 10 ( 256 1b00_A) ( 793 1dcf_A) 0.9998 0.9998 2.5739 ( 0 24 45) 0 0.9998 0.9998 10 10 ( 256 1b00_A) ( 971 1dxy ) 0.7998 0.8886 3.3488 ( 0 11 28) 0 0.7998 0.8886 10 9 ( 256 1b00_A) ( 980 1dz3_A) 0.8998 0.8998 2.9565 ( 0 18 36) 0 0.8998 0.8998 10 10 ( 256 1b00_A) ( 1042 1e5d_A) 0.8175 0.8175 5.1816 ( 2 19 45) 0 0.8994 0.8994 10 10 ( 256 1b00_A) ( 1177 1eiw_A) 0.6726 0.7051 3.4968 ( 2 16 28) 0 0.7561 0.7925 10 9 ( 256 1b00_A) ( 1252 1es9_A) 0.9974 0.8323 5.0998 ( 0 22 45) 0 0.9974 0.8323 10 12 ( 256 1b00_A) ( 1253 1esc ) 0.8939 0.5290 7.2407 ( 0 19 36) 0 0.8965 0.5292 10 17 ( 256 1b00_A) ( 1266 1euc_B) 0.9990 0.8329 4.0499 ( 0 18 45) 0 0.9990 0.8329 10 12 ( 256 1b00_A) ( 1379 1f2v_A) 0.9978 0.6248 4.9078 ( 0 15 45) 0 0.9978 0.6248 10 16 ( 256 1b00_A) ( 1397 1f4p_A) 0.7994 0.8878 4.7507 ( 0 14 28) 0 0.8994 0.9989 10 9 ( 256 1b00_A) ( 1443 1f8y_A) 0.7792 0.7141 5.2161 ( 1 14 28) 0 0.7792 0.7141 10 11 ( 256 1b00_A) ( 1516 1fjg_B) 0.4000 0.3333 3.8870 ( 0 2 6) 0 0.5996 0.4999 10 12 ( 256 1b00_A) ( 1547 1flc_A) 0.7988 0.4444 5.6155 ( 0 11 28) 0 0.7991 0.4444 10 18 ( 256 1b00_A) ( 1659 1fye_A) 0.5994 0.3333 6.6843 ( 0 8 15) 0 0.8905 0.4995 10 18 ( 256 1b00_A) ( 1662 1fyx_A) 0.7643 0.7643 4.4949 ( 1 12 28) 0 0.7788 0.7788 10 10 ( 256 1b00_A) ( 1700 1g2i_A) 0.7998 0.5714 3.4034 ( 0 15 28) 0 0.7998 0.6177 10 14 ( 256 1b00_A) ( 1803 1gdh_A) 0.8989 0.8989 4.6714 ( 0 13 36) 0 0.8989 0.8989 10 10 ( 256 1b00_A) ( 1901 1gpm_A) 0.7877 0.4988 3.7289 ( 1 16 28) 0 0.7877 0.5145 10 16 ( 256 1b00_A) ( 2027 1h05_A) 0.8997 0.8180 3.4229 ( 0 10 36) 0 0.8997 0.8180 10 11 ( 256 1b00_A) ( 2427 1i7q_B) 0.6031 0.4921 4.1684 ( 4 25 45) 0 0.6809 0.4921 10 18 ( 256 1b00_A) ( 2470 1iex_A) 0.9973 0.8323 5.1572 ( 0 16 45) 0 0.9973 0.8323 10 12 ( 256 1b00_A) ( 2714 1j2y_A) 0.8997 0.8180 3.3603 ( 0 14 36) 0 0.8997 0.8180 10 11 ( 256 1b00_A) ( 2729 1j4a_A) 0.8992 0.8992 4.3550 ( 0 16 36) 0 0.8992 0.8992 10 10 ( 256 1b00_A) ( 2809 1jbe_A) 0.9997 0.9997 3.0941 ( 0 20 45) 0 0.9997 0.9997 10 10 ( 256 1b00_A) ( 3034 1jrl_A) 0.8977 0.8977 5.6912 ( 0 13 36) 0 0.8977 0.8977 10 10 ( 256 1b00_A) ( 3073 1jvn_A) 0.8907 0.4733 5.3984 ( 1 21 36) 0 0.8907 0.4733 10 19 ( 256 1b00_A) ( 3189 1k66_A) 0.9993 0.9087 3.6750 ( 0 19 45) 0 0.9993 0.9087 10 11 ( 256 1b00_A) ( 3190 1k68_A) 0.9995 0.9995 3.4661 ( 0 19 45) 0 0.9995 0.9995 10 10 ( 256 1b00_A) ( 3199 1k7c_A) 0.8985 0.5998 5.1142 ( 0 19 36) 0 0.8985 0.5998 10 15 ( 256 1b00_A) ( 3234 1k9v_F) 0.8919 0.4996 5.4583 ( 1 22 36) 0 0.8919 0.4996 10 18 ( 256 1b00_A) ( 3238 1ka9_H) 0.8896 0.5615 6.0878 ( 1 21 36) 0 0.8896 0.5615 10 16 ( 256 1b00_A) ( 3295 1kgs_A) 0.9998 0.9998 2.5732 ( 0 21 45) 0 0.9998 0.9998 10 10 ( 256 1b00_A) ( 3412 1krw_A) 0.8995 0.8995 3.8221 ( 0 15 36) 0 0.8995 0.8995 10 10 ( 256 1b00_A) ( 3462 1kwg_A) 0.8996 0.5625 3.6436 ( 0 16 36) 0 0.8996 0.5625 10 16 ( 256 1b00_A) ( 3560 1l7d_A) 0.6997 0.4117 4.7395 ( 0 9 21) 0 0.9957 0.5879 10 17 ( 256 1b00_A) ( 3581 1l9x_A) 0.7116 0.4242 4.1257 ( 3 23 45) 0 0.8910 0.4242 10 23 ( 256 1b00_A) ( 3632 1li4_A) 0.9854 0.5548 4.9734 ( 1 21 45) 0 0.9914 0.5551 10 18 ( 256 1b00_A) ( 3801 1m2e_A) 0.8998 0.9996 3.2061 ( 0 19 36) 0 0.8998 0.9996 10 9 ( 256 1b00_A) ( 3896 1mb3_A) 0.9996 0.9996 3.1589 ( 0 24 45) 0 0.9996 0.9996 10 10 ( 256 1b00_A) ( 4066 1mx3_A) 0.7991 0.7267 5.1616 ( 0 11 28) 0 0.8698 0.7989 10 11 ( 256 1b00_A) ( 4130 1n57_A) 0.6631 0.5110 4.6331 ( 3 21 45) 0 0.7641 0.5110 10 18 ( 256 1b00_A) ( 4185 1nat ) 0.9997 0.9997 3.0729 ( 0 19 45) 0 0.9997 0.9997 10 10 ( 256 1b00_A) ( 4323 1nni_1) 0.8986 0.8173 5.0099 ( 0 19 36) 0 0.8996 0.8179 10 11 ( 256 1b00_A) ( 4433 1ny5_A) 0.9986 0.9986 4.4149 ( 0 20 45) 0 0.9986 0.9986 10 10 ( 256 1b00_A) ( 4474 1o1y_A) 0.6237 0.4083 3.5904 ( 2 14 28) 0 0.6237 0.4197 10 19 ( 256 1b00_A) ( 4590 1obo_A) 0.8988 0.8988 4.8254 ( 0 19 36) 0 0.8991 0.8991 10 10 ( 256 1b00_A) ( 4669 1oi7_A) 0.7999 0.7272 2.9409 ( 0 10 28) 0 0.8974 0.8166 10 11 ( 256 1b00_A) ( 4787 1ou0_A) 0.7649 0.5586 4.4534 ( 2 17 45) 0 0.9975 0.5881 10 17 ( 256 1b00_A) ( 4813 1oxb_B) 0.9997 0.9997 3.0430 ( 0 24 45) 0 0.9997 0.9997 10 10 ( 256 1b00_A) ( 4871 1p2f_A) 0.9998 0.9998 2.6701 ( 0 20 45) 0 0.9998 0.9998 10 10 ( 256 1b00_A) ( 4905 1p5f_A) 0.6881 0.6083 3.7677 ( 3 22 45) 0 0.7637 0.6083 10 14 ( 256 1b00_A) ( 4916 1p6u_A) 0.8996 0.8996 3.5670 ( 0 15 36) 0 0.8996 0.8996 10 10 ( 256 1b00_A) ( 4926 1p80_A) 0.5000 0.3846 2.5414 ( 0 6 10) 0 0.7514 0.6009 10 13 ( 256 1b00_A) ( 5096 1psd_A) 0.7995 0.8880 4.5797 ( 0 5 28) 0 0.7995 0.8880 10 9 ( 256 1b00_A) ( 5234 1q7r_A) 0.8926 0.5482 3.9533 ( 2 23 45) 0 0.8974 0.5482 10 18 ( 256 1b00_A) ( 5289 1qcz_A) 0.8997 0.8997 3.3867 ( 0 14 36) 0 0.8997 0.8997 10 10 ( 256 1b00_A) ( 5297 1qdl_B) 0.9887 0.5874 3.9681 ( 1 22 45) 0 0.9887 0.5874 10 17 ( 256 1b00_A) ( 5364 1qkk_A) 0.9976 0.9976 5.0191 ( 0 21 45) 0 0.9976 0.9976 10 10 ( 256 1b00_A) ( 5397 1qo0_D) 0.8867 0.7445 8.8542 ( 0 17 36) 0 0.8867 0.7445 10 12 ( 256 1b00_A) ( 5470 1qvz_A) 0.8842 0.5609 5.7565 ( 1 18 36) 0 0.8842 0.5609 10 16 ( 256 1b00_A) ( 5673 1rli_A) 0.8985 0.7494 5.0725 ( 0 17 36) 0 0.8985 0.7494 10 12 ( 256 1b00_A) ( 5752 1s2d_A) 0.5045 0.5288 4.8865 ( 1 6 15) 0 0.5045 0.5288 10 9 ( 256 1b00_A) ( 5785 1say_A) 0.7997 0.4210 3.9725 ( 0 12 28) 0 0.9840 0.5256 10 19 ( 256 1b00_A) ( 5842 1sqs_A) 0.8713 0.6372 5.4206 ( 1 15 36) 0 0.8989 0.6426 10 14 ( 256 1b00_A) ( 5920 1tmy ) 0.9998 0.9998 2.7060 ( 0 25 45) 0 0.9998 0.9998 10 10 ( 256 1b00_A) ( 6242 1vhq_A) 0.7762 0.6129 3.7652 ( 2 19 36) 0 0.8876 0.6405 10 14 ( 256 1b00_A) ( 6258 1vi6_A) 0.3999 0.3077 7.8716 ( 0 2 6) 0 0.7338 0.5950 10 13 ( 256 1b00_A) ( 6283 1vjg_A) 0.8985 0.7494 5.0863 ( 0 14 36) 0 0.8985 0.7494 10 12 ( 256 1b00_A) ( 6496 2nac_A) 0.8991 0.6921 4.5344 ( 0 13 36) 0 0.8991 0.6921 10 13 ( 256 1b00_A) ( 6624 5nul ) 0.7336 0.7336 5.3306 ( 2 17 36) 0 0.8992 0.8992 10 10 ( 256 1b00_A) ( 6640 7req_A) 0.9997 0.8332 3.0291 ( 0 23 45) 0 0.9997 0.8332 10 12 ( 256 1b00_A) ( 6642 7req_B) 0.9984 0.7688 4.5411 ( 0 26 45) 0 0.9984 0.7688 10 13 -------------------------------------------------------------------------------------------------------------------------