------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 266 1b1c_A) ( 6 1a04_A) 0.8174 0.8174 4.9351 ( 0 14 36) 0 0.8175 0.8175 11 11 ( 266 1b1c_A) ( 26 1a2o_A) 0.8174 0.8988 4.7960 ( 0 15 36) 0 0.8174 0.8988 11 10 ( 266 1b1c_A) ( 90 1a9x_B) 0.7005 0.4860 4.5247 ( 2 17 36) 0 0.9022 0.5550 11 18 ( 266 1b1c_A) ( 256 1b00_A) 0.8171 0.8982 5.3126 ( 0 14 36) 0 0.9069 0.9965 11 10 ( 266 1b1c_A) ( 266 1b1c_A) 1.0000 1.0000 0.0000 ( 0 35 55) 0 1.0000 1.0000 11 11 ( 266 1b1c_A) ( 428 1bmt_A) 0.5451 0.5451 6.5539 ( 0 5 15) 0 0.9040 0.9040 11 11 ( 266 1b1c_A) ( 477 1bvy_F) 0.8181 0.9998 2.5185 ( 0 19 36) 0 0.8181 0.9998 11 9 ( 266 1b1c_A) ( 523 1c4k_A) 0.4545 0.6249 3.7105 ( 0 0 10) 0 0.6359 0.8728 11 8 ( 266 1b1c_A) ( 562 1ccw_A) 0.7271 0.7997 3.9728 ( 0 11 28) 0 0.8177 0.8993 11 10 ( 266 1b1c_A) ( 745 1d4a_A) 0.6799 0.5601 4.5431 ( 2 16 36) 0 0.8022 0.5965 11 15 ( 266 1b1c_A) ( 786 1dbw_A) 0.8178 0.8993 4.1899 ( 0 13 36) 0 0.8950 0.9777 11 10 ( 266 1b1c_A) ( 793 1dcf_A) 0.8175 0.8988 4.7851 ( 0 14 36) 0 0.9068 0.9963 11 10 ( 266 1b1c_A) ( 971 1dxy ) 0.5586 0.6168 5.1287 ( 1 7 21) 0 0.7929 0.9369 11 9 ( 266 1b1c_A) ( 980 1dz3_A) 0.4839 0.4887 5.2541 ( 3 15 36) 0 0.7269 0.7995 11 10 ( 266 1b1c_A) ( 1042 1e5d_A) 0.8994 0.9846 3.2485 ( 1 20 45) 0 0.9086 0.9992 11 10 ( 266 1b1c_A) ( 1177 1eiw_A) 0.8035 0.9619 5.6429 ( 1 16 36) 0 0.8035 0.9619 11 9 ( 266 1b1c_A) ( 1252 1es9_A) 0.4544 0.4166 6.1166 ( 0 4 10) 0 0.9053 0.8309 11 12 ( 266 1b1c_A) ( 1253 1esc ) 0.4540 0.2941 9.1856 ( 0 3 10) 0 0.7262 0.4705 11 17 ( 266 1b1c_A) ( 1266 1euc_B) 0.7271 0.6665 4.0430 ( 0 9 28) 0 0.8176 0.7496 11 12 ( 266 1b1c_A) ( 1379 1f2v_A) 0.7365 0.5859 5.9133 ( 2 17 45) 0 0.7791 0.5983 11 16 ( 266 1b1c_A) ( 1397 1f4p_A) 0.8182 0.9999 2.0027 ( 0 14 36) 0 0.8182 0.9999 11 9 ( 266 1b1c_A) ( 1443 1f8y_A) 0.4348 0.4348 6.5885 ( 2 9 28) 0 0.6832 0.6832 11 11 ( 266 1b1c_A) ( 1516 1fjg_B) 0.3636 0.3333 4.0357 ( 0 0 6) 0 0.7266 0.6662 11 12 ( 266 1b1c_A) ( 1547 1flc_A) 0.3636 0.2222 6.2214 ( 0 3 6) 0 0.7248 0.4442 11 18 ( 266 1b1c_A) ( 1659 1fye_A) 0.5454 0.3333 4.2031 ( 0 6 15) 0 0.8068 0.4990 11 18 ( 266 1b1c_A) ( 1662 1fyx_A) 0.7172 0.7840 4.8581 ( 1 15 28) 0 0.7172 0.7840 11 10 ( 266 1b1c_A) ( 1700 1g2i_A) 0.7180 0.6066 4.7876 ( 2 18 36) 0 0.7180 0.6066 11 14 ( 266 1b1c_A) ( 1803 1gdh_A) 0.5454 0.5999 3.9010 ( 0 3 15) 0 0.8162 0.8969 11 10 ( 266 1b1c_A) ( 1901 1gpm_A) 0.8042 0.5603 4.6576 ( 1 16 36) 0 0.8254 0.6095 11 16 ( 266 1b1c_A) ( 2027 1h05_A) 0.8042 0.8042 4.5888 ( 1 16 36) 0 0.8175 0.8175 11 11 ( 266 1b1c_A) ( 2427 1i7q_B) 0.8456 0.5492 4.9913 ( 2 24 45) 0 0.8456 0.5492 11 18 ( 266 1b1c_A) ( 2470 1iex_A) 0.8177 0.7497 4.3823 ( 0 12 36) 0 0.8177 0.7497 11 12 ( 266 1b1c_A) ( 2714 1j2y_A) 0.8090 0.8090 4.7479 ( 1 18 36) 0 0.8174 0.8174 11 11 ( 266 1b1c_A) ( 2729 1j4a_A) 0.6833 0.7335 5.5152 ( 1 10 28) 0 0.8892 0.9688 11 10 ( 266 1b1c_A) ( 2809 1jbe_A) 0.8177 0.8992 4.3778 ( 0 13 36) 0 0.9071 0.9969 11 10 ( 266 1b1c_A) ( 3034 1jrl_A) 0.4543 0.4996 7.6622 ( 0 3 10) 0 0.8148 0.8945 11 10 ( 266 1b1c_A) ( 3073 1jvn_A) 0.7321 0.4665 6.1677 ( 2 19 36) 0 0.7321 0.5004 11 19 ( 266 1b1c_A) ( 3189 1k66_A) 0.6815 0.6815 5.1505 ( 2 15 45) 0 0.9061 0.9061 11 11 ( 266 1b1c_A) ( 3190 1k68_A) 0.6815 0.6997 5.3220 ( 2 15 45) 0 0.9058 0.9948 11 10 ( 266 1b1c_A) ( 3199 1k7c_A) 0.5451 0.3999 6.6152 ( 0 4 15) 0 0.7264 0.5332 11 15 ( 266 1b1c_A) ( 3234 1k9v_F) 0.5628 0.4531 6.0144 ( 3 18 36) 0 0.7264 0.4606 11 18 ( 266 1b1c_A) ( 3238 1ka9_H) 0.8033 0.5601 5.7683 ( 1 16 36) 0 0.8033 0.5601 11 16 ( 266 1b1c_A) ( 3295 1kgs_A) 0.6355 0.6986 6.8719 ( 0 5 21) 0 0.8177 0.8993 11 10 ( 266 1b1c_A) ( 3412 1krw_A) 0.8174 0.8987 4.9239 ( 0 10 36) 0 0.8175 0.8989 11 10 ( 266 1b1c_A) ( 3462 1kwg_A) 0.7944 0.5586 5.9775 ( 1 14 36) 0 0.7944 0.5586 11 16 ( 266 1b1c_A) ( 3560 1l7d_A) 0.7774 0.5243 6.3308 ( 1 12 36) 0 0.8155 0.5291 11 17 ( 266 1b1c_A) ( 3581 1l9x_A) 0.8447 0.4329 5.8261 ( 2 24 45) 0 0.8451 0.4551 11 23 ( 266 1b1c_A) ( 3632 1li4_A) 0.5448 0.3333 7.6355 ( 0 5 15) 0 0.9041 0.5551 11 18 ( 266 1b1c_A) ( 3801 1m2e_A) 0.5453 0.6663 5.1063 ( 0 4 15) 0 0.8171 0.9970 11 9 ( 266 1b1c_A) ( 3896 1mb3_A) 0.8176 0.8991 4.4436 ( 0 14 36) 0 0.8177 0.8993 11 10 ( 266 1b1c_A) ( 4066 1mx3_A) 0.4545 0.4545 3.8701 ( 0 4 10) 0 0.7819 0.7819 11 11 ( 266 1b1c_A) ( 4130 1n57_A) 0.8176 0.4999 4.5331 ( 0 12 36) 0 0.8176 0.5034 11 18 ( 266 1b1c_A) ( 4185 1nat ) 0.8715 0.9421 4.9096 ( 1 14 45) 0 0.9073 0.9971 11 10 ( 266 1b1c_A) ( 4323 1nni_1) 0.6800 0.6800 3.7124 ( 2 16 36) 0 0.7942 0.7942 11 11 ( 266 1b1c_A) ( 4433 1ny5_A) 0.8164 0.8972 5.9569 ( 0 12 36) 0 0.9050 0.9935 11 10 ( 266 1b1c_A) ( 4474 1o1y_A) 0.7178 0.4649 5.2044 ( 2 18 36) 0 0.7178 0.4649 11 19 ( 266 1b1c_A) ( 4590 1obo_A) 0.9034 0.9910 3.0135 ( 1 23 45) 0 0.9085 0.9990 11 10 ( 266 1b1c_A) ( 4669 1oi7_A) 0.7271 0.7271 3.6769 ( 0 10 28) 0 0.7271 0.7271 11 11 ( 266 1b1c_A) ( 4787 1ou0_A) 0.6809 0.5426 6.4939 ( 2 15 45) 0 0.6809 0.5426 11 17 ( 266 1b1c_A) ( 4813 1oxb_B) 0.8177 0.8992 4.4028 ( 0 14 36) 0 0.8177 0.8992 11 10 ( 266 1b1c_A) ( 4871 1p2f_A) 0.7271 0.7997 4.0093 ( 0 11 28) 0 0.8174 0.8987 11 10 ( 266 1b1c_A) ( 4905 1p5f_A) 0.8125 0.6802 4.7122 ( 2 21 45) 0 0.8125 0.6802 11 14 ( 266 1b1c_A) ( 4916 1p6u_A) 0.7269 0.7994 4.6189 ( 0 9 28) 0 0.8172 0.8984 11 10 ( 266 1b1c_A) ( 4926 1p80_A) 0.8101 0.6888 5.4484 ( 1 19 36) 0 0.8101 0.6888 11 13 ( 266 1b1c_A) ( 5096 1psd_A) 0.5187 0.5561 4.2604 ( 1 6 21) 0 0.7444 0.8383 11 9 ( 266 1b1c_A) ( 5234 1q7r_A) 0.8038 0.4987 5.2106 ( 1 16 36) 0 0.8956 0.5544 11 18 ( 266 1b1c_A) ( 5289 1qcz_A) 0.7271 0.7997 4.0191 ( 0 10 28) 0 0.7271 0.7998 11 10 ( 266 1b1c_A) ( 5297 1qdl_B) 0.4544 0.2941 7.1510 ( 0 7 10) 0 0.7955 0.5605 11 17 ( 266 1b1c_A) ( 5364 1qkk_A) 0.8155 0.8957 6.6161 ( 0 12 36) 0 0.8159 0.8963 11 10 ( 266 1b1c_A) ( 5397 1qo0_D) 0.6960 0.6458 3.9898 ( 1 11 28) 0 0.8054 0.7416 11 12 ( 266 1b1c_A) ( 5470 1qvz_A) 0.7175 0.5427 5.7708 ( 2 18 36) 0 0.7181 0.5428 11 16 ( 266 1b1c_A) ( 5673 1rli_A) 0.5329 0.5266 4.4819 ( 4 22 45) 0 0.7944 0.7343 11 12 ( 266 1b1c_A) ( 5752 1s2d_A) 0.5741 0.6097 6.7319 ( 2 13 28) 0 0.6014 0.6954 11 9 ( 266 1b1c_A) ( 5785 1say_A) 0.7645 0.4696 5.3566 ( 1 11 36) 0 0.8757 0.5240 11 19 ( 266 1b1c_A) ( 5842 1sqs_A) 0.8907 0.7086 6.6279 ( 1 18 45) 0 0.8907 0.7086 11 14 ( 266 1b1c_A) ( 5920 1tmy ) 0.8177 0.8992 4.2752 ( 0 14 36) 0 0.9073 0.9972 11 10 ( 266 1b1c_A) ( 6242 1vhq_A) 0.7176 0.6064 5.7218 ( 2 18 36) 0 0.8119 0.6410 11 14 ( 266 1b1c_A) ( 6258 1vi6_A) 0.7270 0.6153 4.4483 ( 0 10 28) 0 0.7270 0.6153 11 13 ( 266 1b1c_A) ( 6283 1vjg_A) 0.5454 0.5000 4.4144 ( 0 5 15) 0 0.8134 0.7469 11 12 ( 266 1b1c_A) ( 6496 2nac_A) 0.7266 0.6151 5.4879 ( 0 9 28) 0 0.8162 0.6914 11 13 ( 266 1b1c_A) ( 6624 5nul ) 0.8995 0.9847 2.9988 ( 1 20 45) 0 0.8995 0.9847 11 10 ( 266 1b1c_A) ( 6640 7req_A) 0.4787 0.4530 6.5094 ( 1 6 15) 0 0.9071 0.8320 11 12 ( 266 1b1c_A) ( 6642 7req_B) 0.6011 0.5221 7.1657 ( 1 9 21) 0 0.8961 0.7635 11 13 -------------------------------------------------------------------------------------------------------------------------