------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 3190 1k68_A) ( 6 1a04_A) 0.9999 0.9090 2.4458 ( 0 19 45) 0 0.9999 0.9090 10 11 ( 3190 1k68_A) ( 26 1a2o_A) 0.9999 0.9999 2.4792 ( 0 21 45) 0 0.9999 0.9999 10 10 ( 3190 1k68_A) ( 90 1a9x_B) 0.8997 0.5000 3.3386 ( 0 13 36) 0 0.8997 0.5000 10 18 ( 3190 1k68_A) ( 256 1b00_A) 0.9995 0.9995 3.4661 ( 0 19 45) 0 0.9995 0.9995 10 10 ( 3190 1k68_A) ( 266 1b1c_A) 0.6997 0.6815 5.3220 ( 2 15 45) 0 0.9948 0.9058 10 11 ( 3190 1k68_A) ( 428 1bmt_A) 0.9992 0.9086 3.7801 ( 0 20 45) 0 0.9992 0.9086 10 11 ( 3190 1k68_A) ( 477 1bvy_F) 0.7998 0.8886 3.5561 ( 0 14 28) 0 0.7999 0.8887 10 9 ( 3190 1k68_A) ( 523 1c4k_A) 0.7993 0.9980 4.7798 ( 0 11 28) 0 0.7993 0.9980 10 8 ( 3190 1k68_A) ( 562 1ccw_A) 0.8993 0.8993 4.2708 ( 0 13 36) 0 0.8993 0.8993 10 10 ( 3190 1k68_A) ( 745 1d4a_A) 0.8991 0.5999 4.4460 ( 0 16 36) 0 0.9981 0.6664 10 15 ( 3190 1k68_A) ( 786 1dbw_A) 0.9873 0.9873 2.7316 ( 1 21 45) 0 0.9873 0.9873 10 10 ( 3190 1k68_A) ( 793 1dcf_A) 0.9999 0.9999 2.4677 ( 0 20 45) 0 0.9999 0.9999 10 10 ( 3190 1k68_A) ( 971 1dxy ) 0.8998 0.9996 3.2212 ( 0 12 36) 0 0.8998 0.9996 10 9 ( 3190 1k68_A) ( 980 1dz3_A) 0.9000 0.9000 2.0549 ( 0 16 36) 0 0.9000 0.9000 10 10 ( 3190 1k68_A) ( 1042 1e5d_A) 0.7649 0.7649 4.5033 ( 2 17 45) 0 0.9885 0.9885 10 10 ( 3190 1k68_A) ( 1177 1eiw_A) 0.7342 0.7651 3.4709 ( 2 17 36) 0 0.8820 0.9702 10 9 ( 3190 1k68_A) ( 1252 1es9_A) 0.9804 0.8252 4.4290 ( 1 19 45) 0 0.9976 0.8323 10 12 ( 3190 1k68_A) ( 1253 1esc ) 0.9938 0.5878 6.3702 ( 0 21 45) 0 0.9938 0.5878 10 17 ( 3190 1k68_A) ( 1266 1euc_B) 0.9994 0.8331 3.5571 ( 0 18 45) 0 0.9994 0.8331 10 12 ( 3190 1k68_A) ( 1379 1f2v_A) 0.9716 0.6221 3.4979 ( 1 17 45) 0 0.9716 0.6221 10 16 ( 3190 1k68_A) ( 1397 1f4p_A) 0.7085 0.7340 3.8161 ( 2 16 36) 0 0.8978 0.9962 10 9 ( 3190 1k68_A) ( 1443 1f8y_A) 0.6237 0.5995 3.6335 ( 1 7 28) 0 0.8663 0.7966 10 11 ( 3190 1k68_A) ( 1516 1fjg_B) 0.4719 0.4488 3.1251 ( 1 5 21) 0 0.6977 0.5824 10 12 ( 3190 1k68_A) ( 1547 1flc_A) 0.8199 0.4948 4.3356 ( 1 11 36) 0 0.8199 0.4948 10 18 ( 3190 1k68_A) ( 1659 1fye_A) 0.5000 0.2778 4.4558 ( 0 4 10) 0 0.8982 0.4999 10 18 ( 3190 1k68_A) ( 1662 1fyx_A) 0.6739 0.6739 2.7723 ( 1 11 21) 0 0.7324 0.7324 10 10 ( 3190 1k68_A) ( 1700 1g2i_A) 0.7999 0.5714 2.9768 ( 0 13 28) 0 0.8998 0.6428 10 14 ( 3190 1k68_A) ( 1803 1gdh_A) 0.9271 0.9271 3.9490 ( 1 13 45) 0 0.9271 0.9271 10 10 ( 3190 1k68_A) ( 1901 1gpm_A) 0.5000 0.3125 4.0695 ( 0 2 10) 0 0.7998 0.5000 10 16 ( 3190 1k68_A) ( 2027 1h05_A) 0.8998 0.8181 2.8745 ( 0 9 36) 0 0.8998 0.8181 10 11 ( 3190 1k68_A) ( 2427 1i7q_B) 0.7932 0.5370 3.3139 ( 2 18 45) 0 0.7932 0.5370 10 18 ( 3190 1k68_A) ( 2470 1iex_A) 0.9992 0.8330 3.8400 ( 0 13 45) 0 0.9992 0.8330 10 12 ( 3190 1k68_A) ( 2714 1j2y_A) 0.8996 0.8180 3.5759 ( 0 13 36) 0 0.8996 0.8180 10 11 ( 3190 1k68_A) ( 2729 1j4a_A) 0.9995 0.9995 3.4126 ( 0 16 45) 0 0.9995 0.9995 10 10 ( 3190 1k68_A) ( 2809 1jbe_A) 0.9997 0.9997 2.8674 ( 0 20 45) 0 0.9997 0.9997 10 10 ( 3190 1k68_A) ( 3034 1jrl_A) 0.8992 0.8992 4.3289 ( 0 11 36) 0 0.8992 0.8992 10 10 ( 3190 1k68_A) ( 3073 1jvn_A) 0.7998 0.4210 3.7330 ( 0 14 28) 0 0.8990 0.4736 10 19 ( 3190 1k68_A) ( 3189 1k66_A) 0.9999 0.9091 1.2139 ( 0 21 45) 0 0.9999 0.9091 10 11 ( 3190 1k68_A) ( 3190 1k68_A) 1.0000 1.0000 0.0000 ( 0 21 45) 0 1.0000 1.0000 10 10 ( 3190 1k68_A) ( 3199 1k7c_A) 0.8995 0.5999 3.7829 ( 0 12 36) 0 0.9906 0.6654 10 15 ( 3190 1k68_A) ( 3234 1k9v_F) 0.7998 0.4444 3.5594 ( 0 14 28) 0 0.8717 0.4984 10 18 ( 3190 1k68_A) ( 3238 1ka9_H) 0.6237 0.4719 2.5757 ( 2 14 28) 0 0.7995 0.5383 10 16 ( 3190 1k68_A) ( 3295 1kgs_A) 0.8651 0.8651 2.5112 ( 1 14 36) 0 0.8978 0.8978 10 10 ( 3190 1k68_A) ( 3412 1krw_A) 0.9998 0.9998 2.8261 ( 0 18 45) 0 0.9998 0.9998 10 10 ( 3190 1k68_A) ( 3462 1kwg_A) 0.8999 0.5625 2.5938 ( 0 14 36) 0 0.8999 0.5625 10 16 ( 3190 1k68_A) ( 3560 1l7d_A) 0.8394 0.5244 4.7209 ( 1 12 36) 0 0.9978 0.5881 10 17 ( 3190 1k68_A) ( 3581 1l9x_A) 0.8778 0.3909 4.7710 ( 1 16 36) 0 0.9704 0.4343 10 23 ( 3190 1k68_A) ( 3632 1li4_A) 0.9995 0.5555 3.4145 ( 0 17 45) 0 0.9995 0.5555 10 18 ( 3190 1k68_A) ( 3801 1m2e_A) 0.8993 0.9988 4.1991 ( 0 18 36) 0 0.8993 0.9988 10 9 ( 3190 1k68_A) ( 3896 1mb3_A) 0.9999 0.9999 2.2416 ( 0 19 45) 0 0.9999 0.9999 10 10 ( 3190 1k68_A) ( 4066 1mx3_A) 0.8994 0.8178 3.9941 ( 0 11 36) 0 0.8994 0.8178 10 11 ( 3190 1k68_A) ( 4130 1n57_A) 0.6796 0.4780 3.5582 ( 2 15 36) 0 0.8632 0.5370 10 18 ( 3190 1k68_A) ( 4185 1nat ) 0.9999 0.9999 2.0610 ( 0 17 45) 0 0.9999 0.9999 10 10 ( 3190 1k68_A) ( 4323 1nni_1) 0.8993 0.8177 4.2063 ( 0 15 36) 0 0.8995 0.8179 10 11 ( 3190 1k68_A) ( 4433 1ny5_A) 0.9964 0.9964 5.5570 ( 0 16 45) 0 0.9964 0.9964 10 10 ( 3190 1k68_A) ( 4474 1o1y_A) 0.4998 0.2631 6.6020 ( 0 4 10) 0 0.4998 0.4086 10 19 ( 3190 1k68_A) ( 4590 1obo_A) 0.7926 0.7926 4.9607 ( 2 18 45) 0 0.8991 0.8991 10 10 ( 3190 1k68_A) ( 4669 1oi7_A) 0.8998 0.8180 3.2100 ( 0 12 36) 0 0.8998 0.8180 10 11 ( 3190 1k68_A) ( 4787 1ou0_A) 0.9995 0.5882 3.3323 ( 0 15 45) 0 0.9995 0.5882 10 17 ( 3190 1k68_A) ( 4813 1oxb_B) 0.9999 0.9999 2.4931 ( 0 20 45) 0 0.9999 0.9999 10 10 ( 3190 1k68_A) ( 4871 1p2f_A) 0.9999 0.9999 2.2839 ( 0 18 45) 0 0.9999 0.9999 10 10 ( 3190 1k68_A) ( 4905 1p5f_A) 0.5000 0.3571 2.9204 ( 0 4 10) 0 0.8178 0.6662 10 14 ( 3190 1k68_A) ( 4916 1p6u_A) 0.8997 0.8997 3.3948 ( 0 15 36) 0 0.8997 0.8997 10 10 ( 3190 1k68_A) ( 4926 1p80_A) 0.8995 0.6922 3.9064 ( 0 16 36) 0 0.8995 0.6922 10 13 ( 3190 1k68_A) ( 5096 1psd_A) 0.8993 0.9988 4.2162 ( 0 4 36) 0 0.8993 0.9988 10 9 ( 3190 1k68_A) ( 5234 1q7r_A) 0.8643 0.4979 4.7093 ( 1 14 36) 0 0.8989 0.4999 10 18 ( 3190 1k68_A) ( 5289 1qcz_A) 0.8995 0.8995 3.8792 ( 0 13 36) 0 0.8995 0.8995 10 10 ( 3190 1k68_A) ( 5297 1qdl_B) 0.8998 0.5294 2.8720 ( 0 12 36) 0 0.8998 0.5294 10 17 ( 3190 1k68_A) ( 5364 1qkk_A) 0.9944 0.9944 6.1994 ( 0 20 45) 0 0.9944 0.9944 10 10 ( 3190 1k68_A) ( 5397 1qo0_D) 0.8794 0.7415 9.9215 ( 0 15 36) 0 0.8794 0.7415 10 12 ( 3190 1k68_A) ( 5470 1qvz_A) 0.8995 0.5624 3.9223 ( 0 16 36) 0 0.9980 0.6248 10 16 ( 3190 1k68_A) ( 5673 1rli_A) 0.9761 0.8234 4.5496 ( 1 18 45) 0 0.9761 0.8234 10 12 ( 3190 1k68_A) ( 5752 1s2d_A) 0.4000 0.4444 3.9879 ( 0 2 6) 0 0.6989 0.7759 10 9 ( 3190 1k68_A) ( 5785 1say_A) 0.8997 0.4737 3.2698 ( 0 12 36) 0 0.9766 0.5253 10 19 ( 3190 1k68_A) ( 5842 1sqs_A) 0.9495 0.7040 6.8108 ( 1 15 45) 0 0.9495 0.7040 10 14 ( 3190 1k68_A) ( 5920 1tmy ) 0.9999 0.9999 2.1657 ( 0 21 45) 0 0.9999 0.9999 10 10 ( 3190 1k68_A) ( 6242 1vhq_A) 0.5000 0.3571 4.3056 ( 0 2 10) 0 0.9798 0.7104 10 14 ( 3190 1k68_A) ( 6258 1vi6_A) 0.5000 0.3846 2.7982 ( 0 5 10) 0 0.8199 0.6673 10 13 ( 3190 1k68_A) ( 6283 1vjg_A) 0.8982 0.7493 5.3553 ( 0 12 36) 0 0.8982 0.7493 10 12 ( 3190 1k68_A) ( 6496 2nac_A) 0.9993 0.7691 3.6232 ( 0 15 45) 0 0.9993 0.7691 10 13 ( 3190 1k68_A) ( 6624 5nul ) 0.7997 0.7997 3.9179 ( 0 13 28) 0 0.8982 0.8982 10 10 ( 3190 1k68_A) ( 6640 7req_A) 0.9993 0.8330 3.7017 ( 0 20 45) 0 0.9993 0.8330 10 12 ( 3190 1k68_A) ( 6642 7req_B) 0.9983 0.7688 4.6022 ( 0 16 45) 0 0.9983 0.7688 10 13 -------------------------------------------------------------------------------------------------------------------------