------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 428 1bmt_A) ( 6 1a04_A) 0.9088 0.9088 3.3013 ( 0 22 45) 0 0.9088 0.9088 11 11 ( 428 1bmt_A) ( 26 1a2o_A) 0.9087 0.9994 3.5866 ( 0 25 45) 0 0.9087 0.9994 11 10 ( 428 1bmt_A) ( 90 1a9x_B) 0.8463 0.5493 3.7678 ( 2 24 45) 0 0.8463 0.5493 11 18 ( 428 1bmt_A) ( 256 1b00_A) 0.9085 0.9990 4.0213 ( 0 24 45) 0 0.9085 0.9990 11 10 ( 428 1bmt_A) ( 266 1b1c_A) 0.5452 0.5452 6.5698 ( 2 12 28) 0 0.9001 0.9001 11 11 ( 428 1bmt_A) ( 428 1bmt_A) 1.0000 1.0000 0.0000 ( 0 36 55) 0 1.0000 1.0000 11 11 ( 428 1bmt_A) ( 477 1bvy_F) 0.5629 0.5818 5.4487 ( 3 18 36) 0 0.7271 0.8885 11 9 ( 428 1bmt_A) ( 523 1c4k_A) 0.6360 0.8734 5.3532 ( 0 10 21) 0 0.6958 0.8767 11 8 ( 428 1bmt_A) ( 562 1ccw_A) 0.8180 0.8996 3.5735 ( 0 20 36) 0 0.8180 0.8996 11 10 ( 428 1bmt_A) ( 745 1d4a_A) 0.7447 0.6181 5.5934 ( 3 26 45) 0 0.7447 0.6181 11 15 ( 428 1bmt_A) ( 786 1dbw_A) 0.9088 0.9995 3.3532 ( 0 22 45) 0 0.9088 0.9995 11 10 ( 428 1bmt_A) ( 793 1dcf_A) 0.9087 0.9994 3.4922 ( 0 23 45) 0 0.9087 0.9994 11 10 ( 428 1bmt_A) ( 971 1dxy ) 0.8005 0.9547 4.4488 ( 1 15 36) 0 0.8005 0.9547 11 9 ( 428 1bmt_A) ( 980 1dz3_A) 0.8179 0.8995 3.8579 ( 0 18 36) 0 0.8179 0.8995 11 10 ( 428 1bmt_A) ( 1042 1e5d_A) 0.7006 0.7341 4.0401 ( 2 17 36) 0 0.8865 0.9646 11 10 ( 428 1bmt_A) ( 1177 1eiw_A) 0.6363 0.7777 2.9067 ( 0 12 21) 0 0.7180 0.7928 11 9 ( 428 1bmt_A) ( 1252 1es9_A) 0.9079 0.8325 4.7614 ( 0 21 45) 0 0.9079 0.8325 11 12 ( 428 1bmt_A) ( 1253 1esc ) 0.3636 0.2353 6.0589 ( 0 0 6) 0 0.8150 0.5290 11 17 ( 428 1bmt_A) ( 1266 1euc_B) 0.9088 0.8331 3.3835 ( 0 19 45) 0 0.9088 0.8331 11 12 ( 428 1bmt_A) ( 1379 1f2v_A) 0.5454 0.3750 4.1363 ( 0 2 15) 0 0.8174 0.5624 11 16 ( 428 1bmt_A) ( 1397 1f4p_A) 0.5451 0.6658 6.5182 ( 0 6 15) 0 0.8174 0.9978 11 9 ( 428 1bmt_A) ( 1443 1f8y_A) 0.5587 0.5587 3.9818 ( 1 7 21) 0 0.7142 0.7142 11 11 ( 428 1bmt_A) ( 1516 1fjg_B) 0.3636 0.3333 3.6048 ( 0 2 6) 0 0.4909 0.4743 11 12 ( 428 1bmt_A) ( 1547 1flc_A) 0.6960 0.4415 3.9695 ( 1 11 28) 0 0.7266 0.4444 11 18 ( 428 1bmt_A) ( 1659 1fye_A) 0.4545 0.2778 3.6844 ( 0 5 10) 0 0.8104 0.5343 11 18 ( 428 1bmt_A) ( 1662 1fyx_A) 0.4545 0.5000 2.9478 ( 0 5 10) 0 0.7102 0.7732 11 10 ( 428 1bmt_A) ( 1700 1g2i_A) 0.7454 0.6179 4.6363 ( 2 20 36) 0 0.7454 0.6179 11 14 ( 428 1bmt_A) ( 1803 1gdh_A) 0.8178 0.8993 4.1707 ( 0 13 36) 0 0.8178 0.8993 11 10 ( 428 1bmt_A) ( 1901 1gpm_A) 0.7563 0.5515 3.4750 ( 2 21 36) 0 0.7563 0.5515 11 16 ( 428 1bmt_A) ( 2027 1h05_A) 0.8179 0.8179 3.7199 ( 0 10 36) 0 0.8179 0.8179 11 11 ( 428 1bmt_A) ( 2427 1i7q_B) 0.7183 0.4887 3.2717 ( 2 18 36) 0 0.7268 0.4992 11 18 ( 428 1bmt_A) ( 2470 1iex_A) 0.9081 0.8327 4.4962 ( 0 17 45) 0 0.9081 0.8327 11 12 ( 428 1bmt_A) ( 2714 1j2y_A) 0.8176 0.8176 4.4960 ( 0 14 36) 0 0.8176 0.8176 11 11 ( 428 1bmt_A) ( 2729 1j4a_A) 0.8178 0.8994 3.9921 ( 0 17 36) 0 0.8178 0.8994 11 10 ( 428 1bmt_A) ( 2809 1jbe_A) 0.9087 0.9993 3.6473 ( 0 21 45) 0 0.9087 0.9993 11 10 ( 428 1bmt_A) ( 3034 1jrl_A) 0.8170 0.8981 5.4194 ( 0 14 36) 0 0.8170 0.8981 11 10 ( 428 1bmt_A) ( 3073 1jvn_A) 0.4543 0.2631 7.6888 ( 0 4 10) 0 0.6360 0.4308 11 19 ( 428 1bmt_A) ( 3189 1k66_A) 0.9085 0.9085 3.9612 ( 0 20 45) 0 0.9085 0.9085 11 11 ( 428 1bmt_A) ( 3190 1k68_A) 0.9086 0.9992 3.7801 ( 0 20 45) 0 0.9086 0.9992 11 10 ( 428 1bmt_A) ( 3199 1k7c_A) 0.6353 0.4664 7.1691 ( 0 8 21) 0 0.8168 0.5997 11 15 ( 428 1bmt_A) ( 3234 1k9v_F) 0.7561 0.4937 4.2701 ( 2 21 36) 0 0.7561 0.4937 11 18 ( 428 1bmt_A) ( 3238 1ka9_H) 0.7560 0.5514 4.5565 ( 2 21 36) 0 0.7560 0.5514 11 16 ( 428 1bmt_A) ( 3295 1kgs_A) 0.9086 0.9992 3.8498 ( 0 21 45) 0 0.9086 0.9992 11 10 ( 428 1bmt_A) ( 3412 1krw_A) 0.9087 0.9994 3.4685 ( 0 18 45) 0 0.9087 0.9994 11 10 ( 428 1bmt_A) ( 3462 1kwg_A) 0.8179 0.5625 3.8085 ( 0 15 36) 0 0.8179 0.5625 11 16 ( 428 1bmt_A) ( 3560 1l7d_A) 0.7269 0.4705 4.7091 ( 0 12 28) 0 0.8973 0.5869 11 17 ( 428 1bmt_A) ( 3581 1l9x_A) 0.9035 0.4346 4.5169 ( 1 24 45) 0 0.9039 0.4347 11 23 ( 428 1bmt_A) ( 3632 1li4_A) 0.9021 0.5550 5.0779 ( 1 23 45) 0 0.9021 0.5550 11 18 ( 428 1bmt_A) ( 3801 1m2e_A) 0.8179 0.9991 3.8832 ( 0 18 36) 0 0.8179 0.9991 11 9 ( 428 1bmt_A) ( 3896 1mb3_A) 0.9089 0.9997 2.8973 ( 0 23 45) 0 0.9089 0.9997 11 10 ( 428 1bmt_A) ( 4066 1mx3_A) 0.8170 0.8170 5.3504 ( 0 12 36) 0 0.8170 0.8170 11 11 ( 428 1bmt_A) ( 4130 1n57_A) 0.6206 0.4317 4.8048 ( 2 15 28) 0 0.6362 0.4509 11 18 ( 428 1bmt_A) ( 4185 1nat ) 0.9088 0.9995 3.3025 ( 0 18 45) 0 0.9088 0.9995 11 10 ( 428 1bmt_A) ( 4323 1nni_1) 0.8070 0.8070 4.5809 ( 1 17 36) 0 0.9004 0.9004 11 11 ( 428 1bmt_A) ( 4433 1ny5_A) 0.9061 0.9952 5.9853 ( 0 18 45) 0 0.9061 0.9952 11 10 ( 428 1bmt_A) ( 4474 1o1y_A) 0.3636 0.2105 6.2050 ( 0 3 6) 0 0.4256 0.3358 11 19 ( 428 1bmt_A) ( 4590 1obo_A) 0.6357 0.6990 6.3501 ( 0 9 21) 0 0.8245 0.8994 11 10 ( 428 1bmt_A) ( 4669 1oi7_A) 0.7272 0.7272 2.7612 ( 0 12 28) 0 0.8169 0.8169 11 11 ( 428 1bmt_A) ( 4787 1ou0_A) 0.4545 0.2941 4.0870 ( 0 3 10) 0 0.6357 0.4117 11 17 ( 428 1bmt_A) ( 4813 1oxb_B) 0.9088 0.9996 3.2382 ( 0 24 45) 0 0.9088 0.9996 11 10 ( 428 1bmt_A) ( 4871 1p2f_A) 0.9085 0.9990 4.0108 ( 0 20 45) 0 0.9085 0.9990 11 10 ( 428 1bmt_A) ( 4905 1p5f_A) 0.9037 0.7127 4.2788 ( 1 24 45) 0 0.9037 0.7127 11 14 ( 428 1bmt_A) ( 4916 1p6u_A) 0.8179 0.8996 3.6262 ( 0 16 36) 0 0.8179 0.8996 11 10 ( 428 1bmt_A) ( 4926 1p80_A) 0.4839 0.4708 4.3951 ( 4 20 36) 0 0.7264 0.6150 11 13 ( 428 1bmt_A) ( 5096 1psd_A) 0.7268 0.8875 5.0210 ( 0 7 28) 0 0.7268 0.8876 11 9 ( 428 1bmt_A) ( 5234 1q7r_A) 0.8608 0.5509 4.6488 ( 2 26 45) 0 0.8608 0.5509 11 18 ( 428 1bmt_A) ( 5289 1qcz_A) 0.8179 0.8995 3.8030 ( 0 17 36) 0 0.8179 0.8995 11 10 ( 428 1bmt_A) ( 5297 1qdl_B) 0.8368 0.5785 3.9004 ( 2 23 45) 0 0.8368 0.5785 11 17 ( 428 1bmt_A) ( 5364 1qkk_A) 0.9051 0.9937 6.4122 ( 0 20 45) 0 0.9051 0.9937 11 10 ( 428 1bmt_A) ( 5397 1qo0_D) 0.8048 0.7413 9.9864 ( 0 16 36) 0 0.8048 0.7413 11 12 ( 428 1bmt_A) ( 5470 1qvz_A) 0.8107 0.5613 4.6649 ( 1 19 36) 0 0.8107 0.5613 11 16 ( 428 1bmt_A) ( 5673 1rli_A) 0.9012 0.8282 4.9987 ( 1 22 45) 0 0.9012 0.8282 11 12 ( 428 1bmt_A) ( 5752 1s2d_A) 0.4545 0.5555 3.7912 ( 0 5 10) 0 0.4545 0.5555 11 9 ( 428 1bmt_A) ( 5785 1say_A) 0.6917 0.5005 5.0898 ( 3 23 45) 0 0.9470 0.5751 11 19 ( 428 1bmt_A) ( 5842 1sqs_A) 0.6489 0.5943 5.0481 ( 3 21 45) 0 0.8170 0.6425 11 14 ( 428 1bmt_A) ( 5920 1tmy ) 0.9088 0.9995 3.3107 ( 0 23 45) 0 0.9088 0.9995 11 10 ( 428 1bmt_A) ( 6242 1vhq_A) 0.5865 0.5364 4.3453 ( 3 19 36) 0 0.8458 0.6932 11 14 ( 428 1bmt_A) ( 6258 1vi6_A) 0.6363 0.5384 3.5651 ( 0 8 21) 0 0.6652 0.5856 11 13 ( 428 1bmt_A) ( 6283 1vjg_A) 0.8034 0.7403 5.6865 ( 1 16 36) 0 0.8158 0.7513 11 12 ( 428 1bmt_A) ( 6496 2nac_A) 0.8176 0.6921 4.4976 ( 0 15 36) 0 0.8176 0.6921 11 13 ( 428 1bmt_A) ( 6624 5nul ) 0.7265 0.7988 5.5493 ( 0 14 28) 0 0.7269 0.7995 11 10 ( 428 1bmt_A) ( 6640 7req_A) 0.9089 0.8332 2.8341 ( 0 25 45) 0 0.9089 0.8332 11 12 ( 428 1bmt_A) ( 6642 7req_B) 0.8177 0.6921 4.2200 ( 0 19 36) 0 0.8524 0.7700 11 13 -------------------------------------------------------------------------------------------------------------------------