-------------------------------------------------------------------------------------------------------------------------
Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:
HELIX min length: 5 STRAND min length: 3
shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100
anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12
Legend:
( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2
-------------------------------------------------------------------------------------------------------------------------
( 4323 1nni_1) ( 6 1a04_A) 0.9028 0.9028 4.3089 ( 1 23 45) 0 0.9028 0.9028 11 11
( 4323 1nni_1) ( 26 1a2o_A) 0.8178 0.8994 4.0820 ( 0 19 36) 0 0.8178 0.8994 11 10
( 4323 1nni_1) ( 90 1a9x_B) 0.8071 0.4990 4.4092 ( 1 17 36) 0 0.8071 0.5309 11 18
( 4323 1nni_1) ( 256 1b00_A) 0.8173 0.8986 5.0099 ( 0 19 36) 0 0.8179 0.8996 11 10
( 4323 1nni_1) ( 266 1b1c_A) 0.6800 0.6800 3.7124 ( 2 16 36) 0 0.7942 0.7942 11 11
( 4323 1nni_1) ( 428 1bmt_A) 0.8070 0.8070 4.5809 ( 1 17 36) 0 0.9004 0.9004 11 11
( 4323 1nni_1) ( 477 1bvy_F) 0.7272 0.8887 3.2283 ( 0 11 28) 0 0.7272 0.8887 11 9
( 4323 1nni_1) ( 523 1c4k_A) 0.7268 0.9979 4.8355 ( 0 11 28) 0 0.7268 0.9979 11 8
( 4323 1nni_1) ( 562 1ccw_A) 0.8174 0.8987 4.9202 ( 0 16 36) 0 0.8174 0.8987 11 10
( 4323 1nni_1) ( 745 1d4a_A) 0.8609 0.6554 4.4747 ( 2 26 45) 0 0.8609 0.6554 11 15
( 4323 1nni_1) ( 786 1dbw_A) 0.8256 0.8773 4.2178 ( 2 22 45) 0 0.8256 0.8828 11 10
( 4323 1nni_1) ( 793 1dcf_A) 0.8179 0.8995 3.8087 ( 0 19 36) 0 0.8180 0.8997 11 10
( 4323 1nni_1) ( 971 1dxy ) 0.5454 0.5722 5.3282 ( 2 12 28) 0 0.7261 0.8858 11 9
( 4323 1nni_1) ( 980 1dz3_A) 0.7174 0.7844 3.6592 ( 1 15 28) 0 0.8164 0.8971 11 10
( 4323 1nni_1) ( 1042 1e5d_A) 0.8047 0.8787 2.6742 ( 1 16 36) 0 0.8047 0.8787 11 10
( 4323 1nni_1) ( 1177 1eiw_A) 0.7041 0.8311 5.3288 ( 1 12 28) 0 0.7041 0.8311 11 9
( 4323 1nni_1) ( 1252 1es9_A) 0.7268 0.6663 5.0344 ( 0 11 28) 0 0.7268 0.6692 11 12
( 4323 1nni_1) ( 1253 1esc ) 0.5573 0.4000 9.0120 ( 1 7 21) 0 0.8072 0.5281 11 17
( 4323 1nni_1) ( 1266 1euc_B) 0.7884 0.7302 4.5811 ( 1 13 36) 0 0.8172 0.7494 11 12
( 4323 1nni_1) ( 1379 1f2v_A) 0.7881 0.5575 5.2077 ( 1 13 36) 0 0.8449 0.6136 11 16
( 4323 1nni_1) ( 1397 1f4p_A) 0.7272 0.8887 2.9306 ( 0 13 28) 0 0.7852 0.9195 11 9
( 4323 1nni_1) ( 1443 1f8y_A) 0.5442 0.5442 9.0577 ( 0 3 15) 0 0.6361 0.6361 11 11
( 4323 1nni_1) ( 1516 1fjg_B) 0.3636 0.3333 3.5728 ( 0 2 6) 0 0.6362 0.5832 11 12
( 4323 1nni_1) ( 1547 1flc_A) 0.6360 0.3889 5.3012 ( 0 5 21) 0 0.7095 0.4428 11 18
( 4323 1nni_1) ( 1659 1fye_A) 0.5453 0.3333 5.0701 ( 0 9 15) 0 0.8101 0.5310 11 18
( 4323 1nni_1) ( 1662 1fyx_A) 0.7175 0.7845 3.2680 ( 1 15 28) 0 0.7644 0.8191 11 10
( 4323 1nni_1) ( 1700 1g2i_A) 0.8175 0.6427 4.6362 ( 0 21 36) 0 0.8175 0.6427 11 14
( 4323 1nni_1) ( 1803 1gdh_A) 0.6362 0.6998 4.2879 ( 0 6 21) 0 0.9059 0.9948 11 10
( 4323 1nni_1) ( 1901 1gpm_A) 0.8664 0.6178 4.9717 ( 2 27 45) 0 0.8664 0.6178 11 16
( 4323 1nni_1) ( 2027 1h05_A) 0.7269 0.7269 4.7762 ( 0 4 28) 0 0.8172 0.8172 11 11
( 4323 1nni_1) ( 2427 1i7q_B) 0.6362 0.3889 4.1803 ( 0 10 21) 0 0.7260 0.5054 11 18
( 4323 1nni_1) ( 2470 1iex_A) 0.9079 0.8325 4.7798 ( 0 18 45) 0 0.9079 0.8325 11 12
( 4323 1nni_1) ( 2714 1j2y_A) 0.6362 0.6362 4.7047 ( 0 6 21) 0 0.8176 0.8176 11 11
( 4323 1nni_1) ( 2729 1j4a_A) 0.8032 0.8763 5.9504 ( 1 16 36) 0 0.8032 0.8763 11 10
( 4323 1nni_1) ( 2809 1jbe_A) 0.8178 0.8995 3.9405 ( 0 17 36) 0 0.8179 0.8995 11 10
( 4323 1nni_1) ( 3034 1jrl_A) 0.6360 0.6994 5.5140 ( 0 7 21) 0 0.7265 0.7988 11 10
( 4323 1nni_1) ( 3073 1jvn_A) 0.6489 0.4910 5.0530 ( 4 28 45) 0 0.7643 0.4910 11 19
( 4323 1nni_1) ( 3189 1k66_A) 0.9351 0.9351 4.5957 ( 2 27 55) 0 0.9351 0.9351 11 11
( 4323 1nni_1) ( 3190 1k68_A) 0.8177 0.8993 4.2063 ( 0 15 36) 0 0.8179 0.8995 11 10
( 4323 1nni_1) ( 3199 1k7c_A) 0.6360 0.4666 5.3545 ( 0 8 21) 0 0.7173 0.5732 11 15
( 4323 1nni_1) ( 3234 1k9v_F) 0.7736 0.5393 5.0964 ( 3 28 45) 0 0.8129 0.5393 11 18
( 4323 1nni_1) ( 3238 1ka9_H) 0.6488 0.5525 5.7070 ( 4 28 45) 0 0.7648 0.5532 11 16
( 4323 1nni_1) ( 3295 1kgs_A) 0.7145 0.7798 3.6868 ( 1 14 28) 0 0.8046 0.8785 11 10
( 4323 1nni_1) ( 3412 1krw_A) 0.7271 0.7997 4.0838 ( 0 10 28) 0 0.8174 0.8988 11 10
( 4323 1nni_1) ( 3462 1kwg_A) 0.7270 0.5000 4.1240 ( 0 10 28) 0 0.7956 0.5588 11 16
( 4323 1nni_1) ( 3560 1l7d_A) 0.6649 0.4621 5.9566 ( 1 9 28) 0 0.7142 0.4930 11 17
( 4323 1nni_1) ( 3581 1l9x_A) 0.7649 0.3897 4.5632 ( 2 22 36) 0 0.7649 0.3947 11 23
( 4323 1nni_1) ( 3632 1li4_A) 0.7455 0.4924 4.2826 ( 2 20 36) 0 0.8983 0.5677 11 18
( 4323 1nni_1) ( 3801 1m2e_A) 0.7180 0.7929 4.4974 ( 2 18 36) 0 0.8177 0.9986 11 9
( 4323 1nni_1) ( 3896 1mb3_A) 0.9037 0.9914 4.2763 ( 1 24 45) 0 0.9037 0.9914 11 10
( 4323 1nni_1) ( 4066 1mx3_A) 0.6833 0.6833 5.3835 ( 1 10 28) 0 0.8075 0.8075 11 11
( 4323 1nni_1) ( 4130 1n57_A) 0.8538 0.5502 4.7532 ( 2 25 45) 0 0.8538 0.5502 11 18
( 4323 1nni_1) ( 4185 1nat ) 0.8941 0.9762 4.3915 ( 1 18 45) 0 0.8941 0.9762 11 10
( 4323 1nni_1) ( 4323 1nni_1) 1.0000 1.0000 0.0000 ( 0 40 55) 0 1.0000 1.0000 11 11
( 4323 1nni_1) ( 4433 1ny5_A) 0.8977 0.9819 5.4418 ( 1 20 45) 0 0.8977 0.9819 11 10
( 4323 1nni_1) ( 4474 1o1y_A) 0.5373 0.3152 5.7484 ( 1 11 15) 0 0.5373 0.4171 11 19
( 4323 1nni_1) ( 4590 1obo_A) 0.8112 0.8889 2.5512 ( 1 19 36) 0 0.8112 0.8889 11 10
( 4323 1nni_1) ( 4669 1oi7_A) 0.8178 0.8178 4.1893 ( 0 15 36) 0 0.8178 0.8178 11 11
( 4323 1nni_1) ( 4787 1ou0_A) 0.6958 0.4667 4.8744 ( 1 11 28) 0 0.7449 0.5604 11 17
( 4323 1nni_1) ( 4813 1oxb_B) 0.8110 0.8885 3.9057 ( 1 19 36) 0 0.8178 0.8994 11 10
( 4323 1nni_1) ( 4871 1p2f_A) 0.8178 0.8994 3.9725 ( 0 17 36) 0 0.8180 0.8998 11 10
( 4323 1nni_1) ( 4905 1p5f_A) 0.9950 0.7842 4.9770 ( 1 31 55) 0 0.9950 0.7842 11 14
( 4323 1nni_1) ( 4916 1p6u_A) 0.8131 0.8919 4.2573 ( 1 21 36) 0 0.8131 0.8919 11 10
( 4323 1nni_1) ( 4926 1p80_A) 0.6315 0.6007 4.5523 ( 4 27 45) 0 0.6315 0.6007 11 13
( 4323 1nni_1) ( 5096 1psd_A) 0.5454 0.5721 5.5795 ( 1 6 28) 0 0.7262 0.8859 11 9
( 4323 1nni_1) ( 5234 1q7r_A) 0.7096 0.4429 5.9532 ( 1 13 28) 0 0.7265 0.5252 11 18
( 4323 1nni_1) ( 5289 1qcz_A) 0.8005 0.8723 4.4139 ( 1 15 36) 0 0.8142 0.8936 11 10
( 4323 1nni_1) ( 5297 1qdl_B) 0.8040 0.5277 4.8929 ( 1 16 36) 0 0.8040 0.5277 11 17
( 4323 1nni_1) ( 5364 1qkk_A) 0.8161 0.8966 6.2576 ( 0 17 36) 0 0.8171 0.8982 11 10
( 4323 1nni_1) ( 5397 1qo0_D) 0.8100 0.7447 8.7979 ( 0 16 36) 0 0.8100 0.7447 11 12
( 4323 1nni_1) ( 5470 1qvz_A) 0.9038 0.6242 4.8957 ( 1 25 45) 0 0.9038 0.6242 11 16
( 4323 1nni_1) ( 5673 1rli_A) 0.9676 0.8952 4.4020 ( 2 33 55) 0 0.9676 0.8952 11 12
( 4323 1nni_1) ( 5752 1s2d_A) 0.4751 0.4879 7.5829 ( 3 15 28) 0 0.6351 0.7744 11 9
( 4323 1nni_1) ( 5785 1say_A) 0.8000 0.4724 5.3404 ( 1 15 36) 0 0.8948 0.5254 11 19
( 4323 1nni_1) ( 5842 1sqs_A) 0.8463 0.6933 3.8053 ( 2 24 45) 0 0.8463 0.6933 11 14
( 4323 1nni_1) ( 5920 1tmy ) 0.8461 0.9055 4.2615 ( 2 24 45) 0 0.8461 0.9055 11 10
( 4323 1nni_1) ( 6242 1vhq_A) 0.7453 0.6178 4.9085 ( 2 20 36) 0 0.8105 0.6493 11 14
( 4323 1nni_1) ( 6258 1vi6_A) 0.4545 0.3846 4.9056 ( 0 2 10) 0 0.6126 0.5474 11 13
( 4323 1nni_1) ( 6283 1vjg_A) 0.7251 0.6652 7.3014 ( 0 11 28) 0 0.7268 0.6664 11 12
( 4323 1nni_1) ( 6496 2nac_A) 0.6951 0.6007 6.4599 ( 1 11 28) 0 0.8029 0.6855 11 13
( 4323 1nni_1) ( 6624 5nul ) 0.8123 0.8907 3.5033 ( 1 20 36) 0 0.8123 0.8907 11 10
( 4323 1nni_1) ( 6640 7req_A) 0.8539 0.7960 4.6368 ( 2 25 45) 0 0.8539 0.7960 11 12
( 4323 1nni_1) ( 6642 7req_B) 0.9015 0.7659 4.6738 ( 1 22 45) 0 0.9015 0.7659 11 13
-------------------------------------------------------------------------------------------------------------------------