------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 477 1bvy_F) ( 6 1a04_A) 0.8881 0.7270 4.3669 ( 0 13 28) 0 0.8884 0.7271 9 11 ( 477 1bvy_F) ( 26 1a2o_A) 0.6655 0.5993 6.8943 ( 0 8 15) 0 0.8885 0.7997 9 10 ( 477 1bvy_F) ( 90 1a9x_B) 0.8885 0.4444 3.5614 ( 0 13 28) 0 0.8885 0.4887 9 18 ( 477 1bvy_F) ( 256 1b00_A) 0.8881 0.7995 4.4211 ( 0 13 28) 0 0.8887 0.7999 9 10 ( 477 1bvy_F) ( 266 1b1c_A) 0.9998 0.8181 2.5185 ( 0 19 36) 0 0.9998 0.8181 9 11 ( 477 1bvy_F) ( 428 1bmt_A) 0.6657 0.5451 6.6810 ( 0 8 15) 0 0.8885 0.7271 9 11 ( 477 1bvy_F) ( 477 1bvy_F) 1.0000 1.0000 0.0000 ( 0 22 36) 0 1.0000 1.0000 9 9 ( 477 1bvy_F) ( 523 1c4k_A) 0.6663 0.7493 5.3061 ( 0 7 15) 0 0.8116 0.8754 9 8 ( 477 1bvy_F) ( 562 1ccw_A) 0.7776 0.6999 3.6990 ( 0 10 21) 0 0.7777 0.6999 9 10 ( 477 1bvy_F) ( 745 1d4a_A) 0.7927 0.5734 4.7913 ( 2 18 36) 0 0.8868 0.5734 9 15 ( 477 1bvy_F) ( 786 1dbw_A) 0.8885 0.7998 3.6853 ( 0 14 28) 0 0.8886 0.7999 9 10 ( 477 1bvy_F) ( 793 1dcf_A) 0.8885 0.7998 3.6746 ( 0 13 28) 0 0.8887 0.7999 9 10 ( 477 1bvy_F) ( 971 1dxy ) 0.7773 0.7773 4.6531 ( 0 9 21) 0 0.8873 0.8873 9 9 ( 477 1bvy_F) ( 980 1dz3_A) 0.7776 0.6999 3.5887 ( 0 10 21) 0 0.8876 0.7992 9 10 ( 477 1bvy_F) ( 1042 1e5d_A) 0.9994 0.8996 3.5404 ( 0 16 36) 0 0.9994 0.8996 9 10 ( 477 1bvy_F) ( 1177 1eiw_A) 0.9789 0.9789 5.3411 ( 1 19 36) 0 0.9789 0.9789 9 9 ( 477 1bvy_F) ( 1252 1es9_A) 0.7508 0.6237 6.1496 ( 1 9 28) 0 0.8878 0.6664 9 12 ( 477 1bvy_F) ( 1253 1esc ) 0.8834 0.4704 7.1502 ( 0 14 28) 0 0.8866 0.4705 9 17 ( 477 1bvy_F) ( 1266 1euc_B) 0.8880 0.6665 4.5532 ( 0 12 28) 0 0.8885 0.6666 9 12 ( 477 1bvy_F) ( 1379 1f2v_A) 0.7925 0.5428 5.1170 ( 2 18 36) 0 0.9815 0.5614 9 16 ( 477 1bvy_F) ( 1397 1f4p_A) 0.9997 0.9997 2.8797 ( 0 16 36) 0 0.9997 0.9997 9 9 ( 477 1bvy_F) ( 1443 1f8y_A) 0.7772 0.6361 4.8952 ( 0 6 21) 0 0.7772 0.6651 9 11 ( 477 1bvy_F) ( 1516 1fjg_B) 0.4444 0.3333 3.7073 ( 0 2 6) 0 0.6665 0.4999 9 12 ( 477 1bvy_F) ( 1547 1flc_A) 0.6167 0.3801 5.5336 ( 1 7 21) 0 0.8116 0.4414 9 18 ( 477 1bvy_F) ( 1659 1fye_A) 0.5553 0.2778 5.6788 ( 0 4 10) 0 0.9812 0.4994 9 18 ( 477 1bvy_F) ( 1662 1fyx_A) 0.7545 0.6859 3.6737 ( 1 13 21) 0 0.7773 0.6997 9 10 ( 477 1bvy_F) ( 1700 1g2i_A) 0.8727 0.5696 3.5714 ( 1 17 28) 0 0.8727 0.6219 9 14 ( 477 1bvy_F) ( 1803 1gdh_A) 0.8876 0.7992 4.9920 ( 0 9 28) 0 0.8876 0.7993 9 10 ( 477 1bvy_F) ( 1901 1gpm_A) 0.8885 0.5000 3.7903 ( 0 14 28) 0 0.8885 0.5221 9 16 ( 477 1bvy_F) ( 2027 1h05_A) 0.8554 0.7143 4.3537 ( 1 14 28) 0 0.8884 0.7453 9 11 ( 477 1bvy_F) ( 2427 1i7q_B) 0.9840 0.4995 4.0123 ( 1 20 36) 0 0.9840 0.4995 9 18 ( 477 1bvy_F) ( 2470 1iex_A) 0.8883 0.6665 4.1537 ( 0 10 28) 0 0.8883 0.6665 9 12 ( 477 1bvy_F) ( 2714 1j2y_A) 0.8754 0.7222 4.4295 ( 1 18 28) 0 0.8885 0.7271 9 11 ( 477 1bvy_F) ( 2729 1j4a_A) 0.8874 0.7991 5.1799 ( 0 12 28) 0 0.8874 0.7991 9 10 ( 477 1bvy_F) ( 2809 1jbe_A) 0.8886 0.7998 3.4627 ( 0 13 28) 0 0.8887 0.7999 9 10 ( 477 1bvy_F) ( 3034 1jrl_A) 0.7764 0.6992 5.9624 ( 0 9 21) 0 0.7768 0.6994 9 10 ( 477 1bvy_F) ( 3073 1jvn_A) 0.8881 0.4210 4.3925 ( 0 14 28) 0 0.8881 0.4210 9 19 ( 477 1bvy_F) ( 3189 1k66_A) 0.8886 0.7272 3.4174 ( 0 14 28) 0 0.8887 0.7272 9 11 ( 477 1bvy_F) ( 3190 1k68_A) 0.8886 0.7998 3.5561 ( 0 14 28) 0 0.8887 0.7999 9 10 ( 477 1bvy_F) ( 3199 1k7c_A) 0.7764 0.4666 5.9624 ( 0 9 21) 0 0.8870 0.5332 9 15 ( 477 1bvy_F) ( 3234 1k9v_F) 0.8880 0.4444 4.4706 ( 0 13 28) 0 0.8880 0.4444 9 18 ( 477 1bvy_F) ( 3238 1ka9_H) 0.8882 0.5000 4.2070 ( 0 18 28) 0 0.8882 0.5000 9 16 ( 477 1bvy_F) ( 3295 1kgs_A) 0.6660 0.5996 6.0637 ( 0 5 15) 0 0.9993 0.8996 9 10 ( 477 1bvy_F) ( 3412 1krw_A) 0.8883 0.7997 4.0067 ( 0 12 28) 0 0.8884 0.7997 9 10 ( 477 1bvy_F) ( 3462 1kwg_A) 0.8179 0.5464 4.5762 ( 2 19 36) 0 0.8179 0.5464 9 16 ( 477 1bvy_F) ( 3560 1l7d_A) 0.8870 0.4705 5.4931 ( 0 9 28) 0 0.8879 0.4705 9 17 ( 477 1bvy_F) ( 3581 1l9x_A) 0.9848 0.3912 5.2458 ( 1 21 36) 0 0.9848 0.3912 9 23 ( 477 1bvy_F) ( 3632 1li4_A) 0.8879 0.4444 4.7061 ( 0 12 28) 0 0.9536 0.4984 9 18 ( 477 1bvy_F) ( 3801 1m2e_A) 0.6666 0.6666 3.5145 ( 0 8 15) 0 0.8880 0.8880 9 9 ( 477 1bvy_F) ( 3896 1mb3_A) 0.8885 0.7998 3.5941 ( 0 13 28) 0 0.8887 0.7999 9 10 ( 477 1bvy_F) ( 4066 1mx3_A) 0.8876 0.7268 4.9451 ( 0 8 28) 0 0.8876 0.7268 9 11 ( 477 1bvy_F) ( 4130 1n57_A) 0.5554 0.2778 5.2604 ( 0 5 10) 0 0.8132 0.4860 9 18 ( 477 1bvy_F) ( 4185 1nat ) 0.9430 0.8647 4.1101 ( 1 14 36) 0 0.9430 0.8647 9 10 ( 477 1bvy_F) ( 4323 1nni_1) 0.8887 0.7272 3.2283 ( 0 11 28) 0 0.8887 0.7272 9 11 ( 477 1bvy_F) ( 4433 1ny5_A) 0.9234 0.8518 6.3739 ( 1 13 36) 0 0.9234 0.8518 9 10 ( 477 1bvy_F) ( 4474 1o1y_A) 0.8179 0.4666 4.5353 ( 2 19 36) 0 0.8550 0.4666 9 19 ( 477 1bvy_F) ( 4590 1obo_A) 0.9994 0.8996 3.5769 ( 0 19 36) 0 0.9994 0.8996 9 10 ( 477 1bvy_F) ( 4669 1oi7_A) 0.7776 0.6363 3.2989 ( 0 9 21) 0 0.8886 0.7272 9 11 ( 477 1bvy_F) ( 4787 1ou0_A) 0.6650 0.3529 7.5559 ( 0 8 15) 0 0.8306 0.4832 9 17 ( 477 1bvy_F) ( 4813 1oxb_B) 0.8885 0.7998 3.6410 ( 0 13 28) 0 0.8887 0.7999 9 10 ( 477 1bvy_F) ( 4871 1p2f_A) 0.8884 0.7997 3.9133 ( 0 12 28) 0 0.8887 0.7999 9 10 ( 477 1bvy_F) ( 4905 1p5f_A) 0.8182 0.6129 4.0508 ( 2 19 36) 0 0.8878 0.6129 9 14 ( 477 1bvy_F) ( 4916 1p6u_A) 0.7776 0.6999 3.6313 ( 0 10 21) 0 0.8320 0.7646 9 10 ( 477 1bvy_F) ( 4926 1p80_A) 0.9857 0.6900 4.7638 ( 1 21 36) 0 0.9857 0.6900 9 13 ( 477 1bvy_F) ( 5096 1psd_A) 0.7773 0.7773 4.4979 ( 0 3 21) 0 0.7773 0.7773 9 9 ( 477 1bvy_F) ( 5234 1q7r_A) 0.8879 0.4444 4.6260 ( 0 14 28) 0 0.8879 0.4936 9 18 ( 477 1bvy_F) ( 5289 1qcz_A) 0.7774 0.6998 4.2421 ( 0 10 21) 0 0.7777 0.7000 9 10 ( 477 1bvy_F) ( 5297 1qdl_B) 0.8884 0.4706 3.7984 ( 0 13 28) 0 0.8887 0.5111 9 17 ( 477 1bvy_F) ( 5364 1qkk_A) 0.8846 0.7975 6.7210 ( 0 13 28) 0 0.8880 0.7995 9 10 ( 477 1bvy_F) ( 5397 1qo0_D) 0.8696 0.6619 9.9065 ( 0 13 28) 0 0.8868 0.6662 9 12 ( 477 1bvy_F) ( 5470 1qvz_A) 0.8886 0.5000 3.4631 ( 0 13 28) 0 0.8886 0.5464 9 16 ( 477 1bvy_F) ( 5673 1rli_A) 0.7931 0.6796 3.7217 ( 2 18 36) 0 0.8875 0.6796 9 12 ( 477 1bvy_F) ( 5752 1s2d_A) 0.8312 0.8312 5.1340 ( 1 12 28) 0 0.8312 0.8312 9 9 ( 477 1bvy_F) ( 5785 1say_A) 0.9262 0.4716 4.9245 ( 1 13 36) 0 0.9262 0.4716 9 19 ( 477 1bvy_F) ( 5842 1sqs_A) 0.9556 0.6375 3.2535 ( 1 15 36) 0 0.9556 0.6375 9 14 ( 477 1bvy_F) ( 5920 1tmy ) 0.8887 0.7999 3.2358 ( 0 14 28) 0 0.8887 0.7999 9 10 ( 477 1bvy_F) ( 6242 1vhq_A) 0.9846 0.6411 5.3600 ( 1 21 36) 0 0.9846 0.6411 9 14 ( 477 1bvy_F) ( 6258 1vi6_A) 0.8883 0.6153 4.1635 ( 0 12 28) 0 0.8883 0.6153 9 13 ( 477 1bvy_F) ( 6283 1vjg_A) 0.7759 0.5829 6.4614 ( 0 9 21) 0 0.7775 0.5833 9 12 ( 477 1bvy_F) ( 6496 2nac_A) 0.8872 0.6151 5.3007 ( 0 7 28) 0 0.8872 0.6151 9 13 ( 477 1bvy_F) ( 6624 5nul ) 0.9996 0.8998 3.2255 ( 0 16 36) 0 0.9996 0.8998 9 10 ( 477 1bvy_F) ( 6640 7req_A) 0.8881 0.6665 4.3991 ( 0 14 28) 0 0.8885 0.6666 9 12 ( 477 1bvy_F) ( 6642 7req_B) 0.7775 0.5384 3.9847 ( 0 11 21) 0 0.8883 0.6153 9 13 -------------------------------------------------------------------------------------------------------------------------