------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 5297 1qdl_B) ( 6 1a04_A) 0.5767 0.8256 4.2849 ( 2 22 45) 0 0.5767 0.8256 17 11 ( 5297 1qdl_B) ( 26 1a2o_A) 0.5876 0.9905 3.8265 ( 1 23 45) 0 0.5876 0.9905 17 10 ( 5297 1qdl_B) ( 90 1a9x_B) 0.9999 0.9444 2.1913 ( 0 102 136) 0 0.9999 0.9444 17 18 ( 5297 1qdl_B) ( 256 1b00_A) 0.5874 0.9887 3.9681 ( 1 22 45) 0 0.5874 0.9887 17 10 ( 5297 1qdl_B) ( 266 1b1c_A) 0.3398 0.3481 5.7384 ( 6 21 45) 0 0.5767 0.8255 17 11 ( 5297 1qdl_B) ( 428 1bmt_A) 0.5785 0.8368 3.9004 ( 2 23 45) 0 0.5785 0.8368 17 11 ( 5297 1qdl_B) ( 477 1bvy_F) 0.5111 0.7647 4.8398 ( 2 17 36) 0 0.5111 0.8887 17 9 ( 5297 1qdl_B) ( 523 1c4k_A) 0.4342 0.5817 5.8469 ( 2 12 28) 0 0.4621 0.8731 17 8 ( 5297 1qdl_B) ( 562 1ccw_A) 0.4678 0.7646 3.4302 ( 1 12 28) 0 0.5280 0.8804 17 10 ( 5297 1qdl_B) ( 745 1d4a_A) 0.5277 0.5969 4.8855 ( 1 16 36) 0 0.5293 0.5997 17 15 ( 5297 1qdl_B) ( 786 1dbw_A) 0.5294 0.8997 3.4899 ( 0 15 36) 0 0.5294 0.8997 17 10 ( 5297 1qdl_B) ( 793 1dcf_A) 0.5460 0.7117 3.9393 ( 3 23 45) 0 0.5460 0.8785 17 10 ( 5297 1qdl_B) ( 971 1dxy ) 0.5293 0.9984 4.5455 ( 0 16 36) 0 0.5293 0.9984 17 9 ( 5297 1qdl_B) ( 980 1dz3_A) 0.4706 0.7998 3.7239 ( 0 10 28) 0 0.4706 0.7998 17 10 ( 5297 1qdl_B) ( 1042 1e5d_A) 0.5278 0.8782 4.1274 ( 1 16 36) 0 0.5293 0.8979 17 10 ( 5297 1qdl_B) ( 1177 1eiw_A) 0.4705 0.8879 4.6055 ( 0 14 28) 0 0.5283 0.9745 17 9 ( 5297 1qdl_B) ( 1252 1es9_A) 0.5244 0.7235 4.5360 ( 1 12 36) 0 0.5244 0.7235 17 12 ( 5297 1qdl_B) ( 1253 1esc ) 0.4684 0.4684 6.5583 ( 1 13 28) 0 0.5277 0.5277 17 17 ( 5297 1qdl_B) ( 1266 1euc_B) 0.3529 0.5000 3.1006 ( 0 3 15) 0 0.5861 0.8213 17 12 ( 5297 1qdl_B) ( 1379 1f2v_A) 0.2941 0.3125 4.4465 ( 0 2 10) 0 0.5317 0.5456 17 16 ( 5297 1qdl_B) ( 1397 1f4p_A) 0.5273 0.9543 4.8066 ( 1 15 36) 0 0.5273 0.9543 17 9 ( 5297 1qdl_B) ( 1443 1f8y_A) 0.4868 0.6081 5.9358 ( 3 20 36) 0 0.4868 0.7142 17 11 ( 5297 1qdl_B) ( 1516 1fjg_B) 0.2353 0.3333 3.6894 ( 0 0 6) 0 0.4117 0.5831 17 12 ( 5297 1qdl_B) ( 1547 1flc_A) 0.2353 0.2222 3.5446 ( 0 2 6) 0 0.5272 0.4984 17 18 ( 5297 1qdl_B) ( 1659 1fye_A) 0.5293 0.4999 4.8669 ( 0 21 36) 0 0.6411 0.6066 17 18 ( 5297 1qdl_B) ( 1662 1fyx_A) 0.4691 0.7797 3.9600 ( 1 14 28) 0 0.4691 0.7797 17 10 ( 5297 1qdl_B) ( 1700 1g2i_A) 0.5822 0.6988 2.9120 ( 2 26 45) 0 0.5822 0.6988 17 14 ( 5297 1qdl_B) ( 1803 1gdh_A) 0.5267 0.8647 4.1488 ( 1 14 36) 0 0.5267 0.8647 17 10 ( 5297 1qdl_B) ( 1901 1gpm_A) 0.9406 0.9993 1.9249 ( 2 87 120) 0 0.9406 0.9993 17 16 ( 5297 1qdl_B) ( 2027 1h05_A) 0.2941 0.4544 6.7460 ( 0 5 10) 0 0.5684 0.7805 17 11 ( 5297 1qdl_B) ( 2427 1i7q_B) 0.9860 0.9339 1.7277 ( 5 102 136) 0 0.9860 0.9339 17 18 ( 5297 1qdl_B) ( 2470 1iex_A) 0.2941 0.4167 2.2970 ( 0 2 10) 0 0.5876 0.8295 17 12 ( 5297 1qdl_B) ( 2714 1j2y_A) 0.5281 0.8066 5.1528 ( 1 17 36) 0 0.5516 0.8066 17 11 ( 5297 1qdl_B) ( 2729 1j4a_A) 0.5281 0.8825 4.1376 ( 1 17 36) 0 0.5283 0.8855 17 10 ( 5297 1qdl_B) ( 2809 1jbe_A) 0.5294 0.8998 3.0643 ( 0 13 36) 0 0.5294 0.8998 17 10 ( 5297 1qdl_B) ( 3034 1jrl_A) 0.4678 0.7638 5.5113 ( 1 12 28) 0 0.4678 0.7638 17 10 ( 5297 1qdl_B) ( 3073 1jvn_A) 0.6226 0.5970 3.7098 ( 8 55 91) 0 0.6226 0.5970 17 19 ( 5297 1qdl_B) ( 3189 1k66_A) 0.5294 0.8181 2.7734 ( 0 12 36) 0 0.5294 0.8181 17 11 ( 5297 1qdl_B) ( 3190 1k68_A) 0.5294 0.8998 2.8720 ( 0 12 36) 0 0.5294 0.8998 17 10 ( 5297 1qdl_B) ( 3199 1k7c_A) 0.5173 0.5781 4.6028 ( 2 19 36) 0 0.5268 0.5951 17 15 ( 5297 1qdl_B) ( 3234 1k9v_F) 0.7955 0.7650 3.0536 ( 7 73 105) 0 0.7955 0.7650 17 18 ( 5297 1qdl_B) ( 3238 1ka9_H) 0.6302 0.6424 3.3200 ( 8 56 91) 0 0.6302 0.6424 17 16 ( 5297 1qdl_B) ( 3295 1kgs_A) 0.5294 0.8997 3.3070 ( 0 10 36) 0 0.5294 0.8997 17 10 ( 5297 1qdl_B) ( 3412 1krw_A) 0.5847 0.9550 4.1975 ( 1 15 45) 0 0.5847 0.9550 17 10 ( 5297 1qdl_B) ( 3462 1kwg_A) 0.8271 0.8655 4.2506 ( 5 60 105) 0 0.8271 0.8655 17 16 ( 5297 1qdl_B) ( 3560 1l7d_A) 0.3528 0.3528 8.9849 ( 0 8 15) 0 0.5871 0.5871 17 17 ( 5297 1qdl_B) ( 3581 1l9x_A) 0.7332 0.6076 3.8411 ( 8 69 105) 0 0.7332 0.6076 17 23 ( 5297 1qdl_B) ( 3632 1li4_A) 0.2941 0.2778 3.2734 ( 0 0 10) 0 0.4705 0.4444 17 18 ( 5297 1qdl_B) ( 3801 1m2e_A) 0.5273 0.9546 4.5735 ( 1 15 36) 0 0.5273 0.9546 17 9 ( 5297 1qdl_B) ( 3896 1mb3_A) 0.5294 0.8999 2.5938 ( 0 15 36) 0 0.5294 0.8999 17 10 ( 5297 1qdl_B) ( 4066 1mx3_A) 0.4319 0.4839 3.7852 ( 3 15 36) 0 0.5267 0.7952 17 11 ( 5297 1qdl_B) ( 4130 1n57_A) 0.6407 0.6063 3.4714 ( 2 29 55) 0 0.6407 0.6063 17 18 ( 5297 1qdl_B) ( 4185 1nat ) 0.5294 0.8999 2.7364 ( 0 13 36) 0 0.5294 0.8999 17 10 ( 5297 1qdl_B) ( 4323 1nni_1) 0.5277 0.8040 4.8929 ( 1 16 36) 0 0.5277 0.8040 17 11 ( 5297 1qdl_B) ( 4433 1ny5_A) 0.5292 0.8965 6.2772 ( 0 12 36) 0 0.5292 0.8965 17 10 ( 5297 1qdl_B) ( 4474 1o1y_A) 0.8712 0.7830 2.2409 ( 4 74 105) 0 0.8712 0.7830 17 19 ( 5297 1qdl_B) ( 4590 1obo_A) 0.5293 0.8990 4.5472 ( 0 20 36) 0 0.5293 0.8991 17 10 ( 5297 1qdl_B) ( 4669 1oi7_A) 0.4706 0.7272 2.9618 ( 0 10 28) 0 0.4706 0.7272 17 11 ( 5297 1qdl_B) ( 4787 1ou0_A) 0.3393 0.3393 8.6845 ( 2 11 15) 0 0.5716 0.5716 17 17 ( 5297 1qdl_B) ( 4813 1oxb_B) 0.5394 0.6881 3.7139 ( 3 22 45) 0 0.5394 0.8998 17 10 ( 5297 1qdl_B) ( 4871 1p2f_A) 0.5294 0.8996 3.6146 ( 0 12 36) 0 0.5294 0.8996 17 10 ( 5297 1qdl_B) ( 4905 1p5f_A) 0.6467 0.7848 2.9342 ( 1 31 55) 0 0.6467 0.7848 17 14 ( 5297 1qdl_B) ( 4916 1p6u_A) 0.4706 0.7999 3.2175 ( 0 7 28) 0 0.4706 0.7999 17 10 ( 5297 1qdl_B) ( 4926 1p80_A) 0.5289 0.6903 2.5406 ( 1 21 36) 0 0.5289 0.6903 17 13 ( 5297 1qdl_B) ( 5096 1psd_A) 0.4622 0.7518 4.0286 ( 1 9 28) 0 0.4706 0.8881 17 9 ( 5297 1qdl_B) ( 5234 1q7r_A) 0.9393 0.8875 4.4621 ( 2 80 120) 0 0.9393 0.8875 17 18 ( 5297 1qdl_B) ( 5289 1qcz_A) 0.5294 0.8996 3.6717 ( 0 14 36) 0 0.5294 0.8996 17 10 ( 5297 1qdl_B) ( 5297 1qdl_B) 1.0000 1.0000 0.0000 ( 0 107 136) 0 1.0000 1.0000 17 17 ( 5297 1qdl_B) ( 5364 1qkk_A) 0.5877 0.9918 6.8352 ( 0 17 45) 0 0.5877 0.9918 17 10 ( 5297 1qdl_B) ( 5397 1qo0_D) 0.4679 0.6518 10.9127 ( 1 14 28) 0 0.5256 0.7294 17 12 ( 5297 1qdl_B) ( 5470 1qvz_A) 0.5878 0.6244 3.2096 ( 1 26 45) 0 0.5878 0.6244 17 16 ( 5297 1qdl_B) ( 5673 1rli_A) 0.5281 0.7428 4.3098 ( 1 17 36) 0 0.5877 0.8306 17 12 ( 5297 1qdl_B) ( 5752 1s2d_A) 0.3601 0.3960 5.4603 ( 3 12 28) 0 0.3784 0.6643 17 9 ( 5297 1qdl_B) ( 5785 1say_A) 0.3411 0.3217 3.8081 ( 2 8 21) 0 0.5294 0.4737 17 19 ( 5297 1qdl_B) ( 5842 1sqs_A) 0.4932 0.5620 4.5893 ( 2 14 36) 0 0.5254 0.6326 17 14 ( 5297 1qdl_B) ( 5920 1tmy ) 0.5294 0.8999 2.7868 ( 0 15 36) 0 0.5294 0.8999 17 10 ( 5297 1qdl_B) ( 6242 1vhq_A) 0.6463 0.7838 6.4485 ( 0 33 55) 0 0.6463 0.7838 17 14 ( 5297 1qdl_B) ( 6258 1vi6_A) 0.4706 0.6153 3.9898 ( 0 10 28) 0 0.5146 0.6421 17 13 ( 5297 1qdl_B) ( 6283 1vjg_A) 0.4705 0.6664 4.7970 ( 0 8 28) 0 0.4705 0.6664 17 12 ( 5297 1qdl_B) ( 6496 2nac_A) 0.2941 0.3846 3.2060 ( 0 3 10) 0 0.5860 0.7608 17 13 ( 5297 1qdl_B) ( 6624 5nul ) 0.5067 0.7084 4.2352 ( 2 16 36) 0 0.5293 0.8991 17 10 ( 5297 1qdl_B) ( 6640 7req_A) 0.5286 0.7453 3.8432 ( 1 19 36) 0 0.5293 0.7496 17 12 ( 5297 1qdl_B) ( 6642 7req_B) 0.2941 0.3846 6.6129 ( 0 3 10) 0 0.5293 0.6919 17 13 -------------------------------------------------------------------------------------------------------------------------