------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 6640 7req_A) ( 6 1a04_A) 0.8332 0.9089 2.9473 ( 0 25 45) 0 0.8332 0.9089 12 11 ( 6640 7req_A) ( 26 1a2o_A) 0.8332 0.9998 2.7675 ( 0 27 45) 0 0.8332 0.9998 12 10 ( 6640 7req_A) ( 90 1a9x_B) 0.7462 0.4995 3.3388 ( 1 20 36) 0 0.7462 0.4995 12 18 ( 6640 7req_A) ( 256 1b00_A) 0.8332 0.9997 3.0291 ( 0 23 45) 0 0.8332 0.9997 12 10 ( 6640 7req_A) ( 266 1b1c_A) 0.4530 0.4787 6.5094 ( 1 6 15) 0 0.8320 0.9071 12 11 ( 6640 7req_A) ( 428 1bmt_A) 0.8332 0.9089 2.8341 ( 0 25 45) 0 0.8332 0.9089 12 11 ( 6640 7req_A) ( 477 1bvy_F) 0.6665 0.8881 4.3991 ( 0 14 28) 0 0.6666 0.8885 12 9 ( 6640 7req_A) ( 523 1c4k_A) 0.6582 0.9428 4.3043 ( 1 14 28) 0 0.6582 0.9428 12 8 ( 6640 7req_A) ( 562 1ccw_A) 0.7499 0.8999 2.8224 ( 0 19 36) 0 0.7499 0.8999 12 10 ( 6640 7req_A) ( 745 1d4a_A) 0.7951 0.6533 5.9046 ( 2 25 45) 0 0.7951 0.6533 12 15 ( 6640 7req_A) ( 786 1dbw_A) 0.8333 0.9999 2.3737 ( 0 23 45) 0 0.8333 0.9999 12 10 ( 6640 7req_A) ( 793 1dcf_A) 0.8333 0.9998 2.6025 ( 0 26 45) 0 0.8333 0.9998 12 10 ( 6640 7req_A) ( 971 1dxy ) 0.7429 0.9717 3.4489 ( 1 17 36) 0 0.7429 0.9717 12 9 ( 6640 7req_A) ( 980 1dz3_A) 0.7500 0.8999 2.6103 ( 0 17 36) 0 0.7500 0.8999 12 10 ( 6640 7req_A) ( 1042 1e5d_A) 0.7755 0.8770 4.7181 ( 2 22 45) 0 0.8196 0.9673 12 10 ( 6640 7req_A) ( 1177 1eiw_A) 0.4279 0.4360 3.1580 ( 5 22 36) 0 0.6151 0.7299 12 9 ( 6640 7req_A) ( 1252 1es9_A) 0.7458 0.7458 4.9340 ( 1 20 36) 0 0.9128 0.9128 12 12 ( 6640 7req_A) ( 1253 1esc ) 0.8292 0.5875 7.2133 ( 0 26 45) 0 0.8292 0.5875 12 17 ( 6640 7req_A) ( 1266 1euc_B) 0.8269 0.8269 3.5498 ( 1 20 45) 0 0.8269 0.8269 12 12 ( 6640 7req_A) ( 1379 1f2v_A) 0.8250 0.6230 4.7996 ( 1 19 45) 0 0.8250 0.6230 12 16 ( 6640 7req_A) ( 1397 1f4p_A) 0.6665 0.8880 4.5569 ( 0 13 28) 0 0.6665 0.8883 12 9 ( 6640 7req_A) ( 1443 1f8y_A) 0.4885 0.5281 6.9678 ( 1 9 15) 0 0.5828 0.6355 12 11 ( 6640 7req_A) ( 1516 1fjg_B) 0.4163 0.4163 9.2512 ( 0 5 10) 0 0.5672 0.5672 12 12 ( 6640 7req_A) ( 1547 1flc_A) 0.5831 0.3889 5.3486 ( 0 8 21) 0 0.6661 0.4444 12 18 ( 6640 7req_A) ( 1659 1fye_A) 0.4999 0.3333 5.7991 ( 0 7 15) 0 0.6997 0.4924 12 18 ( 6640 7req_A) ( 1662 1fyx_A) 0.5754 0.6810 3.8646 ( 1 12 21) 0 0.6573 0.7775 12 10 ( 6640 7req_A) ( 1700 1g2i_A) 0.4167 0.3571 3.7655 ( 0 5 10) 0 0.6665 0.5714 12 14 ( 6640 7req_A) ( 1803 1gdh_A) 0.8208 0.9701 4.9880 ( 1 17 45) 0 0.8208 0.9701 12 10 ( 6640 7req_A) ( 1901 1gpm_A) 0.6666 0.5000 3.3551 ( 0 16 28) 0 0.7137 0.5531 12 16 ( 6640 7req_A) ( 2027 1h05_A) 0.7498 0.8179 3.6588 ( 0 11 36) 0 0.7498 0.8179 12 11 ( 6640 7req_A) ( 2427 1i7q_B) 0.5161 0.4390 3.9876 ( 4 22 36) 0 0.6077 0.4719 12 18 ( 6640 7req_A) ( 2470 1iex_A) 0.8328 0.8328 4.2969 ( 0 21 45) 0 0.8328 0.8328 12 12 ( 6640 7req_A) ( 2714 1j2y_A) 0.7498 0.8179 3.6737 ( 0 17 36) 0 0.7830 0.8356 12 11 ( 6640 7req_A) ( 2729 1j4a_A) 0.8327 0.9985 4.4607 ( 0 24 45) 0 0.8327 0.9985 12 10 ( 6640 7req_A) ( 2809 1jbe_A) 0.8333 0.9998 2.6896 ( 0 23 45) 0 0.8333 0.9998 12 10 ( 6640 7req_A) ( 3034 1jrl_A) 0.7492 0.8981 5.4267 ( 0 16 36) 0 0.7492 0.8981 12 10 ( 6640 7req_A) ( 3073 1jvn_A) 0.6664 0.4210 4.8695 ( 0 16 28) 0 0.6664 0.4516 12 19 ( 6640 7req_A) ( 3189 1k66_A) 0.8330 0.9085 3.8960 ( 0 20 45) 0 0.8330 0.9085 12 11 ( 6640 7req_A) ( 3190 1k68_A) 0.8330 0.9993 3.7017 ( 0 20 45) 0 0.8330 0.9993 12 10 ( 6640 7req_A) ( 3199 1k7c_A) 0.7495 0.5998 4.8862 ( 0 18 36) 0 0.7495 0.5998 12 15 ( 6640 7req_A) ( 3234 1k9v_F) 0.6663 0.4444 5.1502 ( 0 17 28) 0 0.6663 0.4444 12 18 ( 6640 7req_A) ( 3238 1ka9_H) 0.6661 0.4999 5.8901 ( 0 17 28) 0 0.6661 0.4999 12 16 ( 6640 7req_A) ( 3295 1kgs_A) 0.8331 0.9994 3.4677 ( 0 20 45) 0 0.8331 0.9994 12 10 ( 6640 7req_A) ( 3412 1krw_A) 0.8255 0.9809 3.9222 ( 1 19 45) 0 0.8311 0.9944 12 10 ( 6640 7req_A) ( 3462 1kwg_A) 0.7410 0.5603 3.8362 ( 1 16 36) 0 0.7410 0.5603 12 16 ( 6640 7req_A) ( 3560 1l7d_A) 0.7488 0.5292 6.0260 ( 0 17 36) 0 0.8283 0.5873 12 17 ( 6640 7req_A) ( 3581 1l9x_A) 0.7004 0.4270 4.9524 ( 3 25 45) 0 0.7004 0.4270 12 23 ( 6640 7req_A) ( 3632 1li4_A) 0.9929 0.6657 6.1686 ( 1 35 66) 0 0.9929 0.6657 12 18 ( 6640 7req_A) ( 3801 1m2e_A) 0.7499 0.9997 2.9535 ( 0 20 36) 0 0.7499 0.9997 12 9 ( 6640 7req_A) ( 3896 1mb3_A) 0.8333 0.9998 2.6315 ( 0 24 45) 0 0.8333 0.9998 12 10 ( 6640 7req_A) ( 4066 1mx3_A) 0.5060 0.5112 5.6163 ( 4 21 45) 0 0.7404 0.8036 12 11 ( 6640 7req_A) ( 4130 1n57_A) 0.3333 0.2222 4.5592 ( 0 2 6) 0 0.4167 0.3826 12 18 ( 6640 7req_A) ( 4185 1nat ) 0.8332 0.9998 2.7944 ( 0 19 45) 0 0.8332 0.9998 12 10 ( 6640 7req_A) ( 4323 1nni_1) 0.7960 0.8539 4.6368 ( 2 25 45) 0 0.7960 0.8539 12 11 ( 6640 7req_A) ( 4433 1ny5_A) 0.8327 0.9985 4.4218 ( 0 18 45) 0 0.8327 0.9985 12 10 ( 6640 7req_A) ( 4474 1o1y_A) 0.3436 0.3175 4.1191 ( 4 14 28) 0 0.3436 0.3175 12 19 ( 6640 7req_A) ( 4590 1obo_A) 0.7497 0.8994 4.1075 ( 0 20 36) 0 0.7498 0.8995 12 10 ( 6640 7req_A) ( 4669 1oi7_A) 0.7499 0.8181 3.1024 ( 0 16 36) 0 0.7499 0.8181 12 11 ( 6640 7req_A) ( 4787 1ou0_A) 0.4166 0.2941 4.9711 ( 0 4 10) 0 0.7484 0.5291 12 17 ( 6640 7req_A) ( 4813 1oxb_B) 0.8333 0.9998 2.6522 ( 0 24 45) 0 0.8333 0.9998 12 10 ( 6640 7req_A) ( 4871 1p2f_A) 0.8332 0.9996 3.1452 ( 0 20 45) 0 0.8332 0.9996 12 10 ( 6640 7req_A) ( 4905 1p5f_A) 0.4167 0.3571 2.9819 ( 0 4 10) 0 0.8264 0.7111 12 14 ( 6640 7req_A) ( 4916 1p6u_A) 0.7499 0.8997 3.4625 ( 0 15 36) 0 0.7499 0.8997 12 10 ( 6640 7req_A) ( 4926 1p80_A) 0.4779 0.4707 5.4924 ( 4 20 36) 0 0.6033 0.5702 12 13 ( 6640 7req_A) ( 5096 1psd_A) 0.7491 0.9963 5.5897 ( 0 9 36) 0 0.7493 0.9969 12 9 ( 6640 7req_A) ( 5234 1q7r_A) 0.7496 0.4999 4.6354 ( 0 20 36) 0 0.7958 0.5501 12 18 ( 6640 7req_A) ( 5289 1qcz_A) 0.4997 0.5993 6.9130 ( 0 4 15) 0 0.7496 0.8991 12 10 ( 6640 7req_A) ( 5297 1qdl_B) 0.7453 0.5286 3.8432 ( 1 19 36) 0 0.7496 0.5293 12 17 ( 6640 7req_A) ( 5364 1qkk_A) 0.8324 0.9977 4.9608 ( 0 20 45) 0 0.8324 0.9977 12 10 ( 6640 7req_A) ( 5397 1qo0_D) 0.7454 0.7454 8.4720 ( 0 20 36) 0 0.7887 0.7887 12 12 ( 6640 7req_A) ( 5470 1qvz_A) 0.5831 0.4374 5.4689 ( 0 10 21) 0 0.5899 0.4983 12 16 ( 6640 7req_A) ( 5673 1rli_A) 0.7834 0.7834 4.9628 ( 2 23 45) 0 0.8279 0.8279 12 12 ( 6640 7req_A) ( 5752 1s2d_A) 0.4167 0.5555 3.3161 ( 0 5 10) 0 0.4167 0.5555 12 9 ( 6640 7req_A) ( 5785 1say_A) 0.7349 0.4721 4.7487 ( 1 14 36) 0 0.8701 0.5737 12 19 ( 6640 7req_A) ( 5842 1sqs_A) 0.7349 0.6357 4.6920 ( 1 14 36) 0 0.7349 0.6357 12 14 ( 6640 7req_A) ( 5920 1tmy ) 0.8333 0.9998 2.5585 ( 0 24 45) 0 0.8333 0.9998 12 10 ( 6640 7req_A) ( 6242 1vhq_A) 0.4163 0.3570 9.6218 ( 0 7 10) 0 0.8252 0.7105 12 14 ( 6640 7req_A) ( 6258 1vi6_A) 0.5832 0.5384 4.4233 ( 0 9 21) 0 0.5832 0.5472 12 13 ( 6640 7req_A) ( 6283 1vjg_A) 0.7345 0.7345 5.5760 ( 1 14 36) 0 0.8256 0.8256 12 12 ( 6640 7req_A) ( 6496 2nac_A) 0.7547 0.7132 5.0177 ( 2 20 45) 0 0.7547 0.7132 12 13 ( 6640 7req_A) ( 6624 5nul ) 0.6664 0.7993 4.9511 ( 0 13 28) 0 0.7495 0.8987 12 10 ( 6640 7req_A) ( 6640 7req_A) 1.0000 1.0000 0.0000 ( 0 46 66) 0 1.0000 1.0000 12 12 ( 6640 7req_A) ( 6642 7req_B) 0.8018 0.7627 3.9356 ( 3 30 55) 0 0.8970 0.8328 12 13 -------------------------------------------------------------------------------------------------------------------------