------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 786 1dbw_A) ( 6 1a04_A) 0.9998 0.9090 2.6348 ( 0 21 45) 0 0.9998 0.9090 10 11 ( 786 1dbw_A) ( 26 1a2o_A) 0.9925 0.9925 2.1195 ( 1 24 45) 0 0.9925 0.9925 10 10 ( 786 1dbw_A) ( 90 1a9x_B) 0.9994 0.5555 3.5636 ( 0 19 45) 0 0.9994 0.5555 10 18 ( 786 1dbw_A) ( 256 1b00_A) 0.9998 0.9998 2.6795 ( 0 21 45) 0 0.9998 0.9998 10 10 ( 786 1dbw_A) ( 266 1b1c_A) 0.8993 0.8178 4.1899 ( 0 13 36) 0 0.9777 0.8950 10 11 ( 786 1dbw_A) ( 428 1bmt_A) 0.9995 0.9088 3.3532 ( 0 22 45) 0 0.9995 0.9088 10 11 ( 786 1dbw_A) ( 477 1bvy_F) 0.7998 0.8885 3.6853 ( 0 14 28) 0 0.7999 0.8886 10 9 ( 786 1dbw_A) ( 523 1c4k_A) 0.7997 0.9991 3.9525 ( 0 12 28) 0 0.7997 0.9991 10 8 ( 786 1dbw_A) ( 562 1ccw_A) 0.8998 0.8998 3.1242 ( 0 15 36) 0 0.8998 0.8998 10 10 ( 786 1dbw_A) ( 745 1d4a_A) 0.8812 0.5974 5.5730 ( 1 17 36) 0 0.9736 0.6630 10 15 ( 786 1dbw_A) ( 786 1dbw_A) 1.0000 1.0000 0.0000 ( 0 25 45) 0 1.0000 1.0000 10 10 ( 786 1dbw_A) ( 793 1dcf_A) 0.9895 0.9895 2.2265 ( 1 22 45) 0 0.9895 0.9895 10 10 ( 786 1dbw_A) ( 971 1dxy ) 0.8996 0.9993 3.6200 ( 0 13 36) 0 0.8996 0.9993 10 9 ( 786 1dbw_A) ( 980 1dz3_A) 0.9000 0.9000 1.9043 ( 0 18 36) 0 0.9000 0.9000 10 10 ( 786 1dbw_A) ( 1042 1e5d_A) 0.8181 0.8181 4.1027 ( 2 19 45) 0 0.9872 0.9872 10 10 ( 786 1dbw_A) ( 1177 1eiw_A) 0.7567 0.7932 3.1918 ( 2 18 36) 0 0.8884 0.9807 10 9 ( 786 1dbw_A) ( 1252 1es9_A) 0.9974 0.8323 5.0993 ( 0 21 45) 0 0.9974 0.8323 10 12 ( 786 1dbw_A) ( 1253 1esc ) 0.8944 0.5290 7.1022 ( 0 18 36) 0 0.8968 0.5292 10 17 ( 786 1dbw_A) ( 1266 1euc_B) 0.9811 0.8256 3.5664 ( 1 19 45) 0 0.9811 0.8256 10 12 ( 786 1dbw_A) ( 1379 1f2v_A) 0.9806 0.6231 4.1937 ( 1 19 45) 0 0.9806 0.6231 10 16 ( 786 1dbw_A) ( 1397 1f4p_A) 0.7997 0.8884 3.9539 ( 0 13 28) 0 0.8993 0.9989 10 9 ( 786 1dbw_A) ( 1443 1f8y_A) 0.4000 0.3636 3.4328 ( 0 3 6) 0 0.7546 0.7166 10 11 ( 786 1dbw_A) ( 1516 1fjg_B) 0.5000 0.4167 2.0071 ( 0 4 10) 0 0.6626 0.5672 10 12 ( 786 1dbw_A) ( 1547 1flc_A) 0.7992 0.4444 5.0128 ( 0 9 28) 0 0.7992 0.4444 10 18 ( 786 1dbw_A) ( 1659 1fye_A) 0.6990 0.3888 6.3544 ( 0 13 21) 0 0.9857 0.5548 10 18 ( 786 1dbw_A) ( 1662 1fyx_A) 0.6726 0.6726 4.2009 ( 2 16 28) 0 0.6999 0.6999 10 10 ( 786 1dbw_A) ( 1700 1g2i_A) 0.8814 0.6393 5.4362 ( 1 17 36) 0 0.8992 0.6427 10 14 ( 786 1dbw_A) ( 1803 1gdh_A) 0.9976 0.9976 5.0104 ( 0 14 45) 0 0.9976 0.9976 10 10 ( 786 1dbw_A) ( 1901 1gpm_A) 0.7999 0.5000 2.9635 ( 0 14 28) 0 0.7999 0.5076 10 16 ( 786 1dbw_A) ( 2027 1h05_A) 0.8997 0.8180 3.3589 ( 0 9 36) 0 0.8997 0.8180 10 11 ( 786 1dbw_A) ( 2427 1i7q_B) 0.6881 0.5174 3.6783 ( 3 22 45) 0 0.7975 0.5174 10 18 ( 786 1dbw_A) ( 2470 1iex_A) 0.9986 0.8328 4.3699 ( 0 16 45) 0 0.9986 0.8328 10 12 ( 786 1dbw_A) ( 2714 1j2y_A) 0.8997 0.8180 3.3145 ( 0 14 36) 0 0.8997 0.8180 10 11 ( 786 1dbw_A) ( 2729 1j4a_A) 0.9985 0.9985 4.4591 ( 0 18 45) 0 0.9985 0.9985 10 10 ( 786 1dbw_A) ( 2809 1jbe_A) 0.9895 0.9895 2.1590 ( 1 22 45) 0 0.9895 0.9895 10 10 ( 786 1dbw_A) ( 3034 1jrl_A) 0.8980 0.8980 5.4809 ( 0 13 36) 0 0.8980 0.8980 10 10 ( 786 1dbw_A) ( 3073 1jvn_A) 0.8988 0.4736 4.8360 ( 0 19 36) 0 0.8988 0.4736 10 19 ( 786 1dbw_A) ( 3189 1k66_A) 0.9873 0.9011 2.9139 ( 1 21 45) 0 0.9873 0.9011 10 11 ( 786 1dbw_A) ( 3190 1k68_A) 0.9873 0.9873 2.7316 ( 1 21 45) 0 0.9873 0.9873 10 10 ( 786 1dbw_A) ( 3199 1k7c_A) 0.8987 0.5998 4.8878 ( 0 14 36) 0 0.8987 0.5998 10 15 ( 786 1dbw_A) ( 3234 1k9v_F) 0.8987 0.4999 4.8789 ( 0 19 36) 0 0.8987 0.4999 10 18 ( 786 1dbw_A) ( 3238 1ka9_H) 0.8980 0.5623 5.4627 ( 0 19 36) 0 0.8980 0.5623 10 16 ( 786 1dbw_A) ( 3295 1kgs_A) 0.9000 0.9000 1.6129 ( 0 16 36) 0 0.9000 0.9000 10 10 ( 786 1dbw_A) ( 3412 1krw_A) 0.9771 0.9771 3.3665 ( 1 18 45) 0 0.9771 0.9771 10 10 ( 786 1dbw_A) ( 3462 1kwg_A) 0.8728 0.5597 3.3129 ( 1 15 36) 0 0.8782 0.5603 10 16 ( 786 1dbw_A) ( 3560 1l7d_A) 0.7997 0.4706 4.0146 ( 0 11 28) 0 0.9788 0.5867 10 17 ( 786 1dbw_A) ( 3581 1l9x_A) 0.8774 0.4322 4.1323 ( 2 22 45) 0 0.8906 0.4325 10 23 ( 786 1dbw_A) ( 3632 1li4_A) 0.9831 0.5546 4.7774 ( 1 20 45) 0 0.9964 0.5554 10 18 ( 786 1dbw_A) ( 3801 1m2e_A) 0.8909 0.9848 2.7264 ( 1 20 36) 0 0.8990 0.9984 10 9 ( 786 1dbw_A) ( 3896 1mb3_A) 0.9999 0.9999 2.0671 ( 0 22 45) 0 0.9999 0.9999 10 10 ( 786 1dbw_A) ( 4066 1mx3_A) 0.7645 0.7369 5.3008 ( 2 17 45) 0 0.8712 0.7999 10 11 ( 786 1dbw_A) ( 4130 1n57_A) 0.6475 0.3856 2.8772 ( 1 9 21) 0 0.9828 0.5546 10 18 ( 786 1dbw_A) ( 4185 1nat ) 0.9999 0.9999 2.3340 ( 0 19 45) 0 0.9999 0.9999 10 10 ( 786 1dbw_A) ( 4323 1nni_1) 0.8826 0.8072 3.9691 ( 1 17 36) 0 0.8828 0.8256 10 11 ( 786 1dbw_A) ( 4433 1ny5_A) 0.9983 0.9983 4.5772 ( 0 18 45) 0 0.9983 0.9983 10 10 ( 786 1dbw_A) ( 4474 1o1y_A) 0.6999 0.3684 3.3577 ( 0 9 21) 0 0.6999 0.4363 10 19 ( 786 1dbw_A) ( 4590 1obo_A) 0.6878 0.6878 5.0492 ( 3 22 45) 0 0.8993 0.8993 10 10 ( 786 1dbw_A) ( 4669 1oi7_A) 0.8999 0.8181 2.7033 ( 0 14 36) 0 0.8999 0.8181 10 11 ( 786 1dbw_A) ( 4787 1ou0_A) 0.9711 0.5861 4.1959 ( 1 17 45) 0 0.9711 0.5861 10 17 ( 786 1dbw_A) ( 4813 1oxb_B) 0.9912 0.9912 2.0113 ( 1 23 45) 0 0.9912 0.9912 10 10 ( 786 1dbw_A) ( 4871 1p2f_A) 0.9815 0.9815 2.6343 ( 1 19 45) 0 0.9815 0.9815 10 10 ( 786 1dbw_A) ( 4905 1p5f_A) 0.8784 0.6386 3.8202 ( 1 16 36) 0 0.9854 0.7115 10 14 ( 786 1dbw_A) ( 4916 1p6u_A) 0.8786 0.8786 2.9108 ( 1 16 36) 0 0.8786 0.8786 10 10 ( 786 1dbw_A) ( 4926 1p80_A) 0.8822 0.6874 4.6189 ( 1 17 36) 0 0.8822 0.6874 10 13 ( 786 1dbw_A) ( 5096 1psd_A) 0.8981 0.9968 5.4025 ( 0 7 36) 0 0.8981 0.9968 10 9 ( 786 1dbw_A) ( 5234 1q7r_A) 0.8993 0.5000 4.2184 ( 0 19 36) 0 0.8993 0.5225 10 18 ( 786 1dbw_A) ( 5289 1qcz_A) 0.8997 0.8997 3.2640 ( 0 15 36) 0 0.8997 0.8997 10 10 ( 786 1dbw_A) ( 5297 1qdl_B) 0.8997 0.5294 3.4899 ( 0 15 36) 0 0.8997 0.5294 10 17 ( 786 1dbw_A) ( 5364 1qkk_A) 0.9853 0.9853 5.0244 ( 1 21 45) 0 0.9853 0.9853 10 10 ( 786 1dbw_A) ( 5397 1qo0_D) 0.8864 0.7444 8.9059 ( 0 16 36) 0 0.8864 0.7444 10 12 ( 786 1dbw_A) ( 5470 1qvz_A) 0.8818 0.5607 5.0328 ( 1 17 36) 0 0.9851 0.6235 10 16 ( 786 1dbw_A) ( 5673 1rli_A) 0.8822 0.7427 4.6675 ( 1 17 36) 0 0.8960 0.7660 10 12 ( 786 1dbw_A) ( 5752 1s2d_A) 0.4000 0.4444 5.0601 ( 0 1 6) 0 0.4719 0.4806 10 9 ( 786 1dbw_A) ( 5785 1say_A) 0.7649 0.5085 4.4856 ( 2 17 45) 0 0.8986 0.5085 10 19 ( 786 1dbw_A) ( 5842 1sqs_A) 0.7295 0.5972 8.7768 ( 2 17 36) 0 0.8988 0.6426 10 14 ( 786 1dbw_A) ( 5920 1tmy ) 0.9912 0.9912 1.8702 ( 1 23 45) 0 0.9937 0.9937 10 10 ( 786 1dbw_A) ( 6242 1vhq_A) 0.7997 0.5714 3.8899 ( 0 13 28) 0 0.9866 0.7117 10 14 ( 786 1dbw_A) ( 6258 1vi6_A) 0.5000 0.3846 2.5595 ( 0 5 10) 0 0.7729 0.6077 10 13 ( 786 1dbw_A) ( 6283 1vjg_A) 0.5999 0.5000 3.6298 ( 0 5 15) 0 0.8941 0.7476 10 12 ( 786 1dbw_A) ( 6496 2nac_A) 0.9951 0.7679 5.9983 ( 0 13 45) 0 0.9951 0.7679 10 13 ( 786 1dbw_A) ( 6624 5nul ) 0.7084 0.7084 4.5297 ( 2 16 36) 0 0.8993 0.8993 10 10 ( 786 1dbw_A) ( 6640 7req_A) 0.9999 0.8333 2.3737 ( 0 23 45) 0 0.9999 0.8333 10 12 ( 786 1dbw_A) ( 6642 7req_B) 0.9992 0.7690 3.8110 ( 0 19 45) 0 0.9992 0.7690 10 13 -------------------------------------------------------------------------------------------------------------------------