------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 793 1dcf_A) ( 6 1a04_A) 0.9999 0.9090 2.1966 ( 0 26 45) 0 0.9999 0.9090 10 11 ( 793 1dcf_A) ( 26 1a2o_A) 0.9999 0.9999 2.3613 ( 0 26 45) 0 0.9999 0.9999 10 10 ( 793 1dcf_A) ( 90 1a9x_B) 0.8828 0.4990 3.5786 ( 1 17 36) 0 0.8845 0.5272 10 18 ( 793 1dcf_A) ( 256 1b00_A) 0.9998 0.9998 2.5739 ( 0 24 45) 0 0.9998 0.9998 10 10 ( 793 1dcf_A) ( 266 1b1c_A) 0.8988 0.8175 4.7851 ( 0 14 36) 0 0.8989 0.8175 10 11 ( 793 1dcf_A) ( 428 1bmt_A) 0.9994 0.9087 3.4922 ( 0 23 45) 0 0.9994 0.9087 10 11 ( 793 1dcf_A) ( 477 1bvy_F) 0.7998 0.8885 3.6746 ( 0 13 28) 0 0.7999 0.8887 10 9 ( 793 1dcf_A) ( 523 1c4k_A) 0.7733 0.9268 4.2918 ( 1 13 28) 0 0.7733 0.9268 10 8 ( 793 1dcf_A) ( 562 1ccw_A) 0.8997 0.8997 3.2489 ( 0 18 36) 0 0.8997 0.8997 10 10 ( 793 1dcf_A) ( 745 1d4a_A) 0.8988 0.5998 4.7898 ( 0 19 36) 0 0.9875 0.6650 10 15 ( 793 1dcf_A) ( 786 1dbw_A) 0.9895 0.9895 2.2265 ( 1 22 45) 0 0.9895 0.9895 10 10 ( 793 1dcf_A) ( 793 1dcf_A) 1.0000 1.0000 0.0000 ( 0 28 45) 0 1.0000 1.0000 10 10 ( 793 1dcf_A) ( 971 1dxy ) 0.8649 0.9434 3.5377 ( 1 14 36) 0 0.8649 0.9434 10 9 ( 793 1dcf_A) ( 980 1dz3_A) 0.9000 0.9000 1.7264 ( 0 17 36) 0 0.9000 0.9000 10 10 ( 793 1dcf_A) ( 1042 1e5d_A) 0.8179 0.8179 4.5118 ( 2 19 45) 0 0.9671 0.9671 10 10 ( 793 1dcf_A) ( 1177 1eiw_A) 0.5000 0.5555 2.6618 ( 0 5 10) 0 0.5995 0.6658 10 9 ( 793 1dcf_A) ( 1252 1es9_A) 0.9049 0.7902 4.9356 ( 2 24 45) 0 0.9688 0.8203 10 12 ( 793 1dcf_A) ( 1253 1esc ) 0.3999 0.2353 5.9827 ( 0 4 6) 0 0.8971 0.5292 10 17 ( 793 1dcf_A) ( 1266 1euc_B) 0.9811 0.8256 3.5777 ( 1 19 45) 0 0.9811 0.8256 10 12 ( 793 1dcf_A) ( 1379 1f2v_A) 0.7930 0.5931 4.2157 ( 2 18 45) 0 0.8813 0.5931 10 16 ( 793 1dcf_A) ( 1397 1f4p_A) 0.7997 0.8885 3.7677 ( 0 14 28) 0 0.8726 0.9553 10 9 ( 793 1dcf_A) ( 1443 1f8y_A) 0.5386 0.5043 2.6842 ( 1 7 15) 0 0.6631 0.6125 10 11 ( 793 1dcf_A) ( 1516 1fjg_B) 0.3998 0.3333 8.3420 ( 0 0 6) 0 0.6966 0.5820 10 12 ( 793 1dcf_A) ( 1547 1flc_A) 0.5600 0.4161 4.7256 ( 2 12 28) 0 0.6999 0.4161 10 18 ( 793 1dcf_A) ( 1659 1fye_A) 0.5997 0.3333 5.7515 ( 0 7 15) 0 0.8814 0.4990 10 18 ( 793 1dcf_A) ( 1662 1fyx_A) 0.6999 0.6999 3.2023 ( 0 9 21) 0 0.7731 0.7731 10 10 ( 793 1dcf_A) ( 1700 1g2i_A) 0.5107 0.4788 4.7222 ( 4 21 36) 0 0.7734 0.5662 10 14 ( 793 1dcf_A) ( 1803 1gdh_A) 0.7647 0.7647 4.8251 ( 2 17 45) 0 0.8971 0.8971 10 10 ( 793 1dcf_A) ( 1901 1gpm_A) 0.7999 0.5000 3.0960 ( 0 13 28) 0 0.7999 0.5492 10 16 ( 793 1dcf_A) ( 2027 1h05_A) 0.8997 0.8180 3.3222 ( 0 10 36) 0 0.8997 0.8180 10 11 ( 793 1dcf_A) ( 2427 1i7q_B) 0.5000 0.2778 3.4648 ( 0 3 10) 0 0.6498 0.4531 10 18 ( 793 1dcf_A) ( 2470 1iex_A) 0.9991 0.8330 3.9462 ( 0 19 45) 0 0.9991 0.8330 10 12 ( 793 1dcf_A) ( 2714 1j2y_A) 0.8995 0.8179 3.8674 ( 0 15 36) 0 0.8995 0.8179 10 11 ( 793 1dcf_A) ( 2729 1j4a_A) 0.9988 0.9988 4.2381 ( 0 21 45) 0 0.9988 0.9988 10 10 ( 793 1dcf_A) ( 2809 1jbe_A) 0.9999 0.9999 2.0687 ( 0 23 45) 0 0.9999 0.9999 10 10 ( 793 1dcf_A) ( 3034 1jrl_A) 0.8986 0.8986 4.9676 ( 0 15 36) 0 0.8986 0.8986 10 10 ( 793 1dcf_A) ( 3073 1jvn_A) 0.8074 0.4689 4.4300 ( 2 21 36) 0 0.8074 0.4689 10 19 ( 793 1dcf_A) ( 3189 1k66_A) 0.9998 0.9089 2.7925 ( 0 20 45) 0 0.9998 0.9089 10 11 ( 793 1dcf_A) ( 3190 1k68_A) 0.9999 0.9999 2.4677 ( 0 20 45) 0 0.9999 0.9999 10 10 ( 793 1dcf_A) ( 3199 1k7c_A) 0.8993 0.5999 4.2241 ( 0 19 36) 0 0.8993 0.5999 10 15 ( 793 1dcf_A) ( 3234 1k9v_F) 0.7995 0.4444 4.4220 ( 0 17 28) 0 0.7995 0.4444 10 18 ( 793 1dcf_A) ( 3238 1ka9_H) 0.7992 0.4999 5.0314 ( 0 16 28) 0 0.7992 0.4999 10 16 ( 793 1dcf_A) ( 3295 1kgs_A) 0.9893 0.9893 2.9634 ( 1 22 45) 0 0.9893 0.9893 10 10 ( 793 1dcf_A) ( 3412 1krw_A) 0.9844 0.9844 3.4699 ( 1 20 45) 0 0.9844 0.9844 10 10 ( 793 1dcf_A) ( 3462 1kwg_A) 0.8785 0.5603 3.4771 ( 1 16 36) 0 0.8785 0.5603 10 16 ( 793 1dcf_A) ( 3560 1l7d_A) 0.8772 0.5277 5.3302 ( 1 16 36) 0 0.9848 0.5871 10 17 ( 793 1dcf_A) ( 3581 1l9x_A) 0.5994 0.3782 4.9367 ( 3 19 36) 0 0.6991 0.4051 10 23 ( 793 1dcf_A) ( 3632 1li4_A) 0.9883 0.5549 4.3538 ( 1 22 45) 0 0.9883 0.5549 10 18 ( 793 1dcf_A) ( 3801 1m2e_A) 0.8998 0.9997 2.9556 ( 0 20 36) 0 0.8998 0.9997 10 9 ( 793 1dcf_A) ( 3896 1mb3_A) 0.9999 0.9999 1.7677 ( 0 24 45) 0 0.9999 0.9999 10 10 ( 793 1dcf_A) ( 4066 1mx3_A) 0.8639 0.7950 5.1868 ( 1 14 36) 0 0.8975 0.8166 10 11 ( 793 1dcf_A) ( 4130 1n57_A) 0.4000 0.2222 3.9868 ( 0 2 6) 0 0.5999 0.3671 10 18 ( 793 1dcf_A) ( 4185 1nat ) 0.9999 0.9999 1.9054 ( 0 19 45) 0 0.9999 0.9999 10 10 ( 793 1dcf_A) ( 4323 1nni_1) 0.8995 0.8179 3.8087 ( 0 19 36) 0 0.8997 0.8180 10 11 ( 793 1dcf_A) ( 4433 1ny5_A) 0.9977 0.9977 4.9814 ( 0 19 45) 0 0.9977 0.9977 10 10 ( 793 1dcf_A) ( 4474 1o1y_A) 0.4000 0.2105 4.4594 ( 0 3 6) 0 0.4000 0.3350 10 19 ( 793 1dcf_A) ( 4590 1obo_A) 0.8995 0.8995 3.9457 ( 0 19 36) 0 0.8995 0.8995 10 10 ( 793 1dcf_A) ( 4669 1oi7_A) 0.8998 0.8181 3.0510 ( 0 14 36) 0 0.8998 0.8181 10 11 ( 793 1dcf_A) ( 4787 1ou0_A) 0.7341 0.5111 4.0500 ( 2 17 36) 0 0.7912 0.5637 10 17 ( 793 1dcf_A) ( 4813 1oxb_B) 0.9999 0.9999 1.8143 ( 0 26 45) 0 0.9999 0.9999 10 10 ( 793 1dcf_A) ( 4871 1p2f_A) 0.9999 0.9999 1.4609 ( 0 22 45) 0 0.9999 0.9999 10 10 ( 793 1dcf_A) ( 4905 1p5f_A) 0.7335 0.6313 5.3287 ( 3 24 45) 0 0.7335 0.6313 10 14 ( 793 1dcf_A) ( 4916 1p6u_A) 0.8999 0.8999 2.5349 ( 0 16 36) 0 0.8999 0.8999 10 10 ( 793 1dcf_A) ( 4926 1p80_A) 0.4998 0.3846 6.3882 ( 0 6 10) 0 0.6800 0.5702 10 13 ( 793 1dcf_A) ( 5096 1psd_A) 0.8985 0.9975 5.0789 ( 0 6 36) 0 0.8985 0.9975 10 9 ( 793 1dcf_A) ( 5234 1q7r_A) 0.7996 0.4444 4.1227 ( 0 14 28) 0 0.8971 0.4998 10 18 ( 793 1dcf_A) ( 5289 1qcz_A) 0.8995 0.8995 3.8581 ( 0 14 36) 0 0.8995 0.8995 10 10 ( 793 1dcf_A) ( 5297 1qdl_B) 0.8785 0.5278 3.3367 ( 1 16 36) 0 0.8785 0.5460 10 17 ( 793 1dcf_A) ( 5364 1qkk_A) 0.9956 0.9956 5.8531 ( 0 22 45) 0 0.9956 0.9956 10 10 ( 793 1dcf_A) ( 5397 1qo0_D) 0.8845 0.7436 9.2016 ( 0 20 36) 0 0.8845 0.7436 10 12 ( 793 1dcf_A) ( 5470 1qvz_A) 0.7927 0.5491 4.8208 ( 2 20 36) 0 0.7927 0.5491 10 16 ( 793 1dcf_A) ( 5673 1rli_A) 0.8859 0.7442 4.0946 ( 1 18 36) 0 0.8859 0.7442 10 12 ( 793 1dcf_A) ( 5752 1s2d_A) 0.4999 0.5554 4.9352 ( 0 4 10) 0 0.5994 0.6656 10 9 ( 793 1dcf_A) ( 5785 1say_A) 0.8647 0.4721 4.0845 ( 1 14 36) 0 0.8995 0.5005 10 19 ( 793 1dcf_A) ( 5842 1sqs_A) 0.8723 0.6374 4.2915 ( 1 15 36) 0 0.8723 0.6374 10 14 ( 793 1dcf_A) ( 5920 1tmy ) 0.9999 0.9999 1.4168 ( 0 25 45) 0 0.9999 0.9999 10 10 ( 793 1dcf_A) ( 6242 1vhq_A) 0.7991 0.5713 5.1733 ( 0 14 28) 0 0.7991 0.6126 10 14 ( 793 1dcf_A) ( 6258 1vi6_A) 0.5000 0.3846 3.2409 ( 0 4 10) 0 0.5000 0.4345 10 13 ( 793 1dcf_A) ( 6283 1vjg_A) 0.8714 0.7380 5.3262 ( 1 15 36) 0 0.8946 0.7478 10 12 ( 793 1dcf_A) ( 6496 2nac_A) 0.9708 0.7610 4.4829 ( 1 17 45) 0 0.9708 0.7610 10 13 ( 793 1dcf_A) ( 6624 5nul ) 0.7996 0.7996 4.1001 ( 0 14 28) 0 0.8724 0.8724 10 10 ( 793 1dcf_A) ( 6640 7req_A) 0.9998 0.8333 2.6025 ( 0 26 45) 0 0.9998 0.8333 10 12 ( 793 1dcf_A) ( 6642 7req_B) 0.9867 0.7656 3.8987 ( 1 21 45) 0 0.9867 0.7656 10 13 -------------------------------------------------------------------------------------------------------------------------