------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 90 1a9x_B) ( 6 1a04_A) 0.5482 0.8367 4.0712 ( 2 23 45) 0 0.5482 0.8367 18 11 ( 90 1a9x_B) ( 26 1a2o_A) 0.4994 0.8888 3.2064 ( 1 19 36) 0 0.4994 0.8888 18 10 ( 90 1a9x_B) ( 90 1a9x_B) 1.0000 1.0000 0.0000 ( 0 123 153) 0 1.0000 1.0000 18 18 ( 90 1a9x_B) ( 256 1b00_A) 0.5550 0.9904 3.9149 ( 1 23 45) 0 0.5550 0.9904 18 10 ( 90 1a9x_B) ( 266 1b1c_A) 0.5173 0.6710 5.1432 ( 3 22 45) 0 0.5550 0.9022 18 11 ( 90 1a9x_B) ( 428 1bmt_A) 0.5493 0.8463 3.7678 ( 2 24 45) 0 0.5493 0.8463 18 11 ( 90 1a9x_B) ( 477 1bvy_F) 0.4887 0.7929 4.5101 ( 2 18 36) 0 0.4887 0.8885 18 9 ( 90 1a9x_B) ( 523 1c4k_A) 0.4230 0.6237 4.8419 ( 2 13 28) 0 0.4230 0.8743 18 8 ( 90 1a9x_B) ( 562 1ccw_A) 0.4606 0.5995 4.1532 ( 3 19 36) 0 0.4906 0.7994 18 10 ( 90 1a9x_B) ( 745 1d4a_A) 0.4987 0.5968 5.6649 ( 1 16 36) 0 0.4998 0.5995 18 15 ( 90 1a9x_B) ( 786 1dbw_A) 0.5555 0.9994 3.5636 ( 0 19 45) 0 0.5555 0.9994 18 10 ( 90 1a9x_B) ( 793 1dcf_A) 0.5272 0.7340 4.0629 ( 3 24 45) 0 0.5272 0.8845 18 10 ( 90 1a9x_B) ( 971 1dxy ) 0.4992 0.9761 4.5217 ( 1 18 36) 0 0.4992 0.9761 18 9 ( 90 1a9x_B) ( 980 1dz3_A) 0.4444 0.7998 3.5803 ( 0 11 28) 0 0.4444 0.7998 18 10 ( 90 1a9x_B) ( 1042 1e5d_A) 0.5000 0.8994 4.1006 ( 0 16 36) 0 0.5000 0.8994 18 10 ( 90 1a9x_B) ( 1177 1eiw_A) 0.4439 0.8726 3.7278 ( 1 17 28) 0 0.4439 0.8726 18 9 ( 90 1a9x_B) ( 1252 1es9_A) 0.5481 0.7831 5.4250 ( 2 23 45) 0 0.5481 0.7831 18 12 ( 90 1a9x_B) ( 1253 1esc ) 0.4432 0.4689 6.4330 ( 1 14 28) 0 0.4432 0.4689 18 17 ( 90 1a9x_B) ( 1266 1euc_B) 0.6110 0.9160 4.0355 ( 0 23 55) 0 0.6110 0.9160 18 12 ( 90 1a9x_B) ( 1379 1f2v_A) 0.2778 0.3125 4.3873 ( 0 6 10) 0 0.6096 0.6848 18 16 ( 90 1a9x_B) ( 1397 1f4p_A) 0.4999 0.9977 4.9656 ( 0 15 36) 0 0.4999 0.9977 18 9 ( 90 1a9x_B) ( 1443 1f8y_A) 0.4717 0.6281 6.5433 ( 3 21 36) 0 0.4717 0.7203 18 11 ( 90 1a9x_B) ( 1516 1fjg_B) 0.2420 0.2827 5.9527 ( 2 6 10) 0 0.3936 0.5285 18 12 ( 90 1a9x_B) ( 1547 1flc_A) 0.2222 0.2222 5.6141 ( 0 2 6) 0 0.4433 0.4433 18 18 ( 90 1a9x_B) ( 1659 1fye_A) 0.4444 0.4444 4.3781 ( 0 17 28) 0 0.7119 0.7119 18 18 ( 90 1a9x_B) ( 1662 1fyx_A) 0.4433 0.7796 4.2337 ( 1 14 28) 0 0.4433 0.7796 18 10 ( 90 1a9x_B) ( 1700 1g2i_A) 0.5550 0.7122 6.4113 ( 1 27 45) 0 0.5550 0.7122 18 14 ( 90 1a9x_B) ( 1803 1gdh_A) 0.4945 0.6099 5.4847 ( 3 19 45) 0 0.4945 0.7518 18 10 ( 90 1a9x_B) ( 1901 1gpm_A) 0.8883 0.9990 2.7280 ( 2 85 120) 0 0.8883 0.9990 18 16 ( 90 1a9x_B) ( 2027 1h05_A) 0.2778 0.4545 4.5221 ( 0 6 10) 0 0.5403 0.7799 18 11 ( 90 1a9x_B) ( 2427 1i7q_B) 0.9334 0.9334 2.4068 ( 5 101 136) 0 0.9334 0.9334 18 18 ( 90 1a9x_B) ( 2470 1iex_A) 0.2778 0.4166 5.4553 ( 0 3 10) 0 0.5554 0.8324 18 12 ( 90 1a9x_B) ( 2714 1j2y_A) 0.2778 0.4545 4.1707 ( 0 2 10) 0 0.4996 0.8132 18 11 ( 90 1a9x_B) ( 2729 1j4a_A) 0.4908 0.7760 4.3908 ( 2 19 36) 0 0.4908 0.7760 18 10 ( 90 1a9x_B) ( 2809 1jbe_A) 0.5000 0.8998 3.0335 ( 0 14 36) 0 0.5000 0.8998 18 10 ( 90 1a9x_B) ( 3034 1jrl_A) 0.4778 0.6787 6.5371 ( 2 15 36) 0 0.4778 0.7633 18 10 ( 90 1a9x_B) ( 3073 1jvn_A) 0.2778 0.2632 5.1357 ( 0 4 10) 0 0.5045 0.5005 18 19 ( 90 1a9x_B) ( 3189 1k66_A) 0.5000 0.8180 3.4116 ( 0 13 36) 0 0.5000 0.8180 18 11 ( 90 1a9x_B) ( 3190 1k68_A) 0.5000 0.8997 3.3386 ( 0 13 36) 0 0.5000 0.8997 18 10 ( 90 1a9x_B) ( 3199 1k7c_A) 0.4924 0.5818 5.5703 ( 2 20 36) 0 0.5495 0.6520 18 15 ( 90 1a9x_B) ( 3234 1k9v_F) 0.7649 0.7649 3.6376 ( 7 73 105) 0 0.7649 0.7649 18 18 ( 90 1a9x_B) ( 3238 1ka9_H) 0.6102 0.6341 3.6178 ( 8 55 91) 0 0.6102 0.6341 18 16 ( 90 1a9x_B) ( 3295 1kgs_A) 0.5000 0.8998 3.2193 ( 0 11 36) 0 0.5000 0.8998 18 10 ( 90 1a9x_B) ( 3412 1krw_A) 0.5000 0.8997 3.3564 ( 0 12 36) 0 0.5000 0.8997 18 10 ( 90 1a9x_B) ( 3462 1kwg_A) 0.8181 0.9107 4.5684 ( 4 64 105) 0 0.8181 0.9107 18 16 ( 90 1a9x_B) ( 3560 1l7d_A) 0.2778 0.2941 4.4816 ( 0 5 10) 0 0.5550 0.5874 18 17 ( 90 1a9x_B) ( 3581 1l9x_A) 0.4444 0.3478 3.1363 ( 0 21 28) 0 0.5463 0.5109 18 23 ( 90 1a9x_B) ( 3632 1li4_A) 0.2778 0.2778 3.0520 ( 0 0 10) 0 0.5588 0.5588 18 18 ( 90 1a9x_B) ( 3801 1m2e_A) 0.4988 0.9646 3.6384 ( 1 16 36) 0 0.4989 0.9680 18 9 ( 90 1a9x_B) ( 3896 1mb3_A) 0.5000 0.8999 2.7988 ( 0 16 36) 0 0.5000 0.8999 18 10 ( 90 1a9x_B) ( 4066 1mx3_A) 0.4779 0.6558 5.6788 ( 2 15 36) 0 0.4779 0.6558 18 11 ( 90 1a9x_B) ( 4130 1n57_A) 0.6074 0.6074 3.6743 ( 2 31 55) 0 0.6074 0.6074 18 18 ( 90 1a9x_B) ( 4185 1nat ) 0.5000 0.8997 3.2802 ( 0 14 36) 0 0.5000 0.8997 18 10 ( 90 1a9x_B) ( 4323 1nni_1) 0.5309 0.7285 5.3646 ( 3 25 45) 0 0.5309 0.8071 18 11 ( 90 1a9x_B) ( 4433 1ny5_A) 0.4999 0.8985 5.1071 ( 0 13 36) 0 0.4999 0.8985 18 10 ( 90 1a9x_B) ( 4474 1o1y_A) 0.8125 0.7734 2.5038 ( 5 73 105) 0 0.8125 0.7734 18 19 ( 90 1a9x_B) ( 4590 1obo_A) 0.5000 0.8992 4.3375 ( 0 21 36) 0 0.5000 0.8992 18 10 ( 90 1a9x_B) ( 4669 1oi7_A) 0.5555 0.9089 3.0345 ( 0 18 45) 0 0.6108 0.9961 18 11 ( 90 1a9x_B) ( 4787 1ou0_A) 0.2778 0.2941 3.9748 ( 0 2 10) 0 0.5034 0.5293 18 17 ( 90 1a9x_B) ( 4813 1oxb_B) 0.5227 0.7117 3.7555 ( 3 23 45) 0 0.5227 0.8998 18 10 ( 90 1a9x_B) ( 4871 1p2f_A) 0.5000 0.8995 3.8174 ( 0 13 36) 0 0.5000 0.8995 18 10 ( 90 1a9x_B) ( 4905 1p5f_A) 0.6109 0.7851 4.8570 ( 0 29 55) 0 0.6109 0.7851 18 14 ( 90 1a9x_B) ( 4916 1p6u_A) 0.4444 0.7997 3.8158 ( 0 7 28) 0 0.4444 0.7997 18 10 ( 90 1a9x_B) ( 4926 1p80_A) 0.4997 0.6909 1.8890 ( 1 23 36) 0 0.4997 0.6909 18 13 ( 90 1a9x_B) ( 5096 1psd_A) 0.3937 0.4882 4.8228 ( 2 10 28) 0 0.3937 0.4882 18 9 ( 90 1a9x_B) ( 5234 1q7r_A) 0.8878 0.8878 3.9712 ( 2 80 120) 0 0.8878 0.8878 18 18 ( 90 1a9x_B) ( 5289 1qcz_A) 0.5000 0.8997 3.4514 ( 0 14 36) 0 0.5000 0.8997 18 10 ( 90 1a9x_B) ( 5297 1qdl_B) 0.9444 0.9999 2.1913 ( 0 102 136) 0 0.9444 0.9999 18 17 ( 90 1a9x_B) ( 5364 1qkk_A) 0.4999 0.8981 5.3765 ( 0 14 36) 0 0.4999 0.8981 18 10 ( 90 1a9x_B) ( 5397 1qo0_D) 0.4431 0.6566 9.4404 ( 1 15 28) 0 0.4431 0.6566 18 12 ( 90 1a9x_B) ( 5470 1qvz_A) 0.5552 0.6244 3.2967 ( 1 26 45) 0 0.5552 0.6244 18 16 ( 90 1a9x_B) ( 5673 1rli_A) 0.4994 0.7452 4.4737 ( 1 19 36) 0 0.4994 0.7454 18 12 ( 90 1a9x_B) ( 5752 1s2d_A) 0.2636 0.3769 4.6433 ( 1 4 10) 0 0.3937 0.6959 18 9 ( 90 1a9x_B) ( 5785 1say_A) 0.2778 0.2632 3.6970 ( 0 2 10) 0 0.4667 0.4602 18 19 ( 90 1a9x_B) ( 5842 1sqs_A) 0.4719 0.5620 4.4143 ( 2 14 36) 0 0.4990 0.6394 18 14 ( 90 1a9x_B) ( 5920 1tmy ) 0.5555 0.9995 3.4523 ( 0 21 45) 0 0.5555 0.9995 18 10 ( 90 1a9x_B) ( 6242 1vhq_A) 0.5555 0.7142 3.1149 ( 0 27 45) 0 0.5555 0.7142 18 14 ( 90 1a9x_B) ( 6258 1vi6_A) 0.3333 0.4615 4.1926 ( 0 5 15) 0 0.4534 0.5380 18 13 ( 90 1a9x_B) ( 6283 1vjg_A) 0.4444 0.6664 4.7580 ( 0 8 28) 0 0.4444 0.6664 18 12 ( 90 1a9x_B) ( 6496 2nac_A) 0.2778 0.3846 6.2203 ( 0 4 10) 0 0.5428 0.7128 18 13 ( 90 1a9x_B) ( 6624 5nul ) 0.5451 0.8595 4.9767 ( 2 21 45) 0 0.5451 0.8985 18 10 ( 90 1a9x_B) ( 6640 7req_A) 0.4995 0.7462 3.3388 ( 1 20 36) 0 0.4995 0.7462 18 12 ( 90 1a9x_B) ( 6642 7req_B) 0.2778 0.3845 6.7400 ( 0 1 10) 0 0.5521 0.7522 18 13 -------------------------------------------------------------------------------------------------------------------------