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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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( 2422 1i7n_A)  (   84 1a9x_A)     0.6248   0.5554   5.0764 (   0    3   10)   0     0.6248   0.5554    8   9
( 2422 1i7n_A)  (  304 1b6r_A)     0.6250   0.8332   2.9441 (   0    3   10)   0     0.6250   0.8332    8   6
( 2422 1i7n_A)  (  947 1dv1_A)     0.7466   0.6648   7.8648 (   0    6   15)   0     0.7466   0.6648    8   9
( 2422 1i7n_A)  ( 1031 1e4e_A)     0.8489   0.6910   6.1997 (   1   15   21)   0     0.8489   0.7077    8  10
( 2422 1i7n_A)  ( 1158 1ehi_A)     0.6249   0.5555   4.4523 (   0    2   10)   0     0.6249   0.5555    8   9
( 2422 1i7n_A)  ( 1932 1gsa  )     0.8039   0.6737   4.2691 (   1   11   21)   0     0.8039   0.6737    8  10
( 2422 1i7n_A)  ( 1940 1gso_A)     0.6250   0.5000   2.7029 (   0    1   10)   0     0.6250   0.5000    8  10
( 2422 1i7n_A)  ( 2422 1i7n_A)     1.0000   1.0000   0.0000 (   0   19   28)   0     1.0000   1.0000    8   8
( 2422 1i7n_A)  ( 2552 1iow  )     0.6248   0.7139   4.7974 (   0    2   10)   0     0.6248   0.7139    8   7
( 2422 1i7n_A)  ( 3322 1kjq_A)     0.6250   0.5555   2.7166 (   0    1   10)   0     0.6250   0.5555    8   9
( 2422 1i7n_A)  ( 3776 1m0w_A)     0.8739   0.6996   4.9003 (   0   12   21)   0     0.8739   0.6996    8  10
( 2422 1i7n_A)  ( 5967 1uc8_A)     0.6249   0.7142   3.6277 (   0    2   10)   0     0.6249   0.7142    8   7

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