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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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( 2552 1iow  )  (   84 1a9x_A)     0.7140   0.5555   4.5830 (   0    3   10)   0     0.9991   0.7775    7   9
( 2552 1iow  )  (  304 1b6r_A)     0.7141   0.8330   3.8622 (   0    4   10)   0     0.8564   0.9985    7   6
( 2552 1iow  )  (  947 1dv1_A)     0.7141   0.5555   3.7834 (   0    3   10)   0     0.7141   0.6170    7   9
( 2552 1iow  )  ( 1031 1e4e_A)     0.8571   0.6000   2.2023 (   0    6   15)   0     0.8571   0.6000    7  10
( 2552 1iow  )  ( 1158 1ehi_A)     0.6633   0.6170   2.9369 (   1    7   21)   0     0.9954   0.7765    7   9
( 2552 1iow  )  ( 1932 1gsa  )     0.8564   0.5999   4.5814 (   0    3   15)   0     0.8564   0.5999    7  10
( 2552 1iow  )  ( 1940 1gso_A)     0.7123   0.4997   7.3225 (   0    2   10)   0     0.9981   0.6997    7  10
( 2552 1iow  )  ( 2422 1i7n_A)     0.7139   0.6248   4.7974 (   0    2   10)   0     0.7139   0.6248    7   8
( 2552 1iow  )  ( 2552 1iow  )     1.0000   1.0000   0.0000 (   0    8   21)   0     1.0000   1.0000    7   7
( 2552 1iow  )  ( 3322 1kjq_A)     0.7138   0.5554   5.1097 (   0    2   10)   0     0.8564   0.6665    7   9
( 2552 1iow  )  ( 3776 1m0w_A)     0.9987   0.6998   4.3228 (   0    3   21)   0     0.9987   0.6998    7  10
( 2552 1iow  )  ( 5967 1uc8_A)     0.8567   0.8567   3.9588 (   0    6   15)   0     0.8567   0.8567    7   7

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