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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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(  304 1b6r_A)  (   84 1a9x_A)     0.6639   0.4441   8.6120 (   0    0    6)   0     0.8306   0.5552    6   9
(  304 1b6r_A)  (  304 1b6r_A)     1.0000   1.0000   0.0000 (   0   10   15)   0     1.0000   1.0000    6   6
(  304 1b6r_A)  (  947 1dv1_A)     0.6655   0.4443   6.9418 (   0    1    6)   0     0.8327   0.5555    6   9
(  304 1b6r_A)  ( 1031 1e4e_A)     0.6658   0.3999   6.4482 (   0    3    6)   0     0.6658   0.3999    6  10
(  304 1b6r_A)  ( 1158 1ehi_A)     0.6659   0.4443   6.1753 (   0    3    6)   0     0.6659   0.4443    6   9
(  304 1b6r_A)  ( 1932 1gsa  )     0.2994   0.2955   3.5249 (   1    3   15)   0     0.2994   0.2955    6  10
(  304 1b6r_A)  ( 1940 1gso_A)     0.8333   0.5000   2.5474 (   0    3   10)   0     0.8333   0.5000    6  10
(  304 1b6r_A)  ( 2422 1i7n_A)     0.8332   0.6250   2.9441 (   0    3   10)   0     0.8332   0.6250    6   8
(  304 1b6r_A)  ( 2552 1iow  )     0.8330   0.7141   3.8622 (   0    4   10)   0     0.9985   0.8564    6   7
(  304 1b6r_A)  ( 3322 1kjq_A)     0.8332   0.5555   3.2278 (   0    4   10)   0     0.8332   0.5555    6   9
(  304 1b6r_A)  ( 3776 1m0w_A)     0.6655   0.3999   6.9589 (   0    3    6)   0     0.6655   0.5045    6  10
(  304 1b6r_A)  ( 5967 1uc8_A)     0.8333   0.7143   2.1859 (   0    4   10)   0     0.8333   0.7143    6   7

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