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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:
HELIX min length: 5 STRAND min length: 3
shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100
anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12
Legend:
( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2
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( 4848 1ozh_A) ( 369 1bfd ) 0.7990 0.7990 3.7118 ( 1 32 66) 0 0.8566 0.8566 15 15
( 4848 1ozh_A) ( 371 1bfd ) 0.8922 0.9438 2.0305 ( 4 56 91) 0 0.8922 0.9438 15 14
( 4848 1ozh_A) ( 1908 1gpu_A) 0.7709 0.6544 3.2554 ( 3 38 66) 0 0.7709 0.6544 15 18
( 4848 1ozh_A) ( 1909 1gpu_A) 0.5718 0.5811 2.5344 ( 6 37 66) 0 0.6825 0.7174 15 14
( 4848 1ozh_A) ( 3044 1jsc_A) 0.8374 0.8374 2.8115 ( 3 42 78) 0 0.8374 0.8374 15 15
( 4848 1ozh_A) ( 3046 1jsc_A) 0.7931 0.9797 1.8427 ( 2 37 66) 0 0.7931 0.9797 15 12
( 4848 1ozh_A) ( 3275 1kek_A) 0.7931 0.6638 3.0158 ( 2 37 66) 0 0.7936 0.6641 15 18
( 4848 1ozh_A) ( 3279 1kek_A) 0.7753 0.4779 5.1067 ( 3 40 66) 0 0.7753 0.5093 15 25
( 4848 1ozh_A) ( 3566 1l8a_A) 0.7646 0.5172 3.1791 ( 3 36 66) 0 0.7913 0.5239 15 23
( 4848 1ozh_A) ( 3567 1l8a_A) 0.6373 0.7136 2.7026 ( 2 20 45) 0 0.6373 0.7136 15 13
( 4848 1ozh_A) ( 4263 1ni4_A) 0.7217 0.5216 3.2624 ( 2 29 55) 0 0.7217 0.5216 15 21
( 4848 1ozh_A) ( 4264 1ni4_B) 0.4666 0.4117 5.9851 ( 0 11 21) 0 0.6878 0.6212 15 17
( 4848 1ozh_A) ( 4702 1ols_A) 0.7679 0.6531 3.3415 ( 3 37 66) 0 0.7679 0.6531 15 18
( 4848 1ozh_A) ( 4703 1ols_B) 0.7862 0.7862 3.7020 ( 2 31 66) 0 0.7862 0.7862 15 15
( 4848 1ozh_A) ( 4796 1ovm_A) 0.7994 0.8563 2.1087 ( 1 35 66) 0 0.7994 0.8563 15 14
( 4848 1ozh_A) ( 4846 1ozh_A) 0.8317 0.7866 2.9218 ( 3 40 78) 0 0.8317 0.7866 15 16
( 4848 1ozh_A) ( 4848 1ozh_A) 1.0000 1.0000 0.0000 ( 0 73 105) 0 1.0000 1.0000 15 15
( 4848 1ozh_A) ( 5071 1pox_A) 0.8347 0.7888 3.0345 ( 3 41 78) 0 0.8347 0.7888 15 16
( 4848 1ozh_A) ( 5073 1pox_A) 0.9193 0.8647 1.6448 ( 3 56 91) 0 0.9193 0.8647 15 16
( 4848 1ozh_A) ( 5123 1pvd_A) 0.7313 0.7829 3.5073 ( 1 23 55) 0 0.7317 0.7835 15 14
( 4848 1ozh_A) ( 5125 1pvd_A) 0.9098 0.9098 2.8416 ( 3 49 91) 0 0.9098 0.9098 15 15
( 4848 1ozh_A) ( 5438 1qs0_A) 0.7679 0.5918 3.4364 ( 3 37 66) 0 0.7679 0.5918 15 20
( 4848 1ozh_A) ( 6049 1umd_A) 0.7994 0.6314 3.1757 ( 1 36 66) 0 0.7994 0.6314 15 19
( 4848 1ozh_A) ( 6074 1upa_A) 0.7990 0.8557 4.5729 ( 1 36 66) 0 0.8643 0.9253 15 14
( 4848 1ozh_A) ( 6076 1upa_A) 0.8627 0.9919 1.8394 ( 2 47 78) 0 0.8627 0.9919 15 13
( 4848 1ozh_A) ( 6375 1zpd_A) 0.7990 0.8558 3.8377 ( 1 33 66) 0 0.7990 0.8558 15 14
( 4848 1ozh_A) ( 6377 1zpd_A) 0.8970 0.8970 2.1820 ( 4 58 91) 0 0.8970 0.8970 15 15
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