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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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( 5573 1r6h_A)  (  754 1d5r_A)     0.9089   0.9996   3.1364 (   0   25   45)   0     0.9089   0.9996   11  10
( 5573 1r6h_A)  ( 1604 1fpz_A)     0.9994   0.8459   3.4861 (   0   31   55)   0     0.9994   0.8459   11  13
( 5573 1r6h_A)  ( 1725 1g4u_S)     0.9077   0.6664   4.9431 (   0   24   45)   0     0.9077   0.6664   11  15
( 5573 1r6h_A)  ( 2436 1i9s_A)     0.9087   0.8331   3.4986 (   0   22   45)   0     0.9087   0.8331   11  12
( 5573 1r6h_A)  ( 2959 1jln_A)     0.9076   0.5881   4.9857 (   0   25   45)   0     0.9076   0.5881   11  17
( 5573 1r6h_A)  ( 3585 1lar_A)     0.9081   0.5881   4.5514 (   0   25   45)   0     0.9081   0.5881   11  17
( 5573 1r6h_A)  ( 3754 1lw3_A)     0.9086   0.4545   3.8743 (   0   22   45)   0     0.9086   0.4545   11  22
( 5573 1r6h_A)  ( 3768 1lyv_A)     0.9036   0.6655   4.4102 (   1   24   45)   0     0.9036   0.6655   11  15
( 5573 1r6h_A)  ( 3963 1mkp  )     0.9087   0.9087   3.5307 (   0   25   45)   0     0.9087   0.9087   11  11
( 5573 1r6h_A)  ( 4655 1ohe_A)     0.7270   0.8881   4.3297 (   0   15   28)   0     0.7270   0.8881   11   9
( 5573 1r6h_A)  ( 4656 1ohe_A)     0.9995   0.8460   3.3031 (   0   30   55)   0     0.9995   0.8460   11  13
( 5573 1r6h_A)  ( 4857 1p15_A)     0.9087   0.9087   3.6305 (   0   25   45)   0     0.9087   0.9087   11  11
( 5573 1r6h_A)  ( 4948 1pa1_A)     0.9074   0.5554   5.1852 (   0   26   45)   0     0.9074   0.5554   11  18
( 5573 1r6h_A)  ( 5573 1r6h_A)     1.0000   1.0000   0.0000 (   0   32   55)   0     1.0000   1.0000   11  11
( 5573 1r6h_A)  ( 6243 1vhr_A)     0.9995   0.9164   3.3341 (   0   31   55)   0     0.9995   0.9164   11  12
( 5573 1r6h_A)  ( 6530 2shp_A)     0.9074   0.5880   5.1616 (   0   25   45)   0     0.9074   0.5880   11  17

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