------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 989 1e0c_A) ( 989 1e0c_A) 1.0000 1.0000 0.0000 ( 0 30 36) 0 1.0000 1.0000 9 9 ( 989 1e0c_A) ( 990 1e0c_A) 0.8889 0.8889 1.6598 ( 0 21 28) 0 0.8889 0.8889 9 9 ( 989 1e0c_A) ( 1878 1gmx_A) 0.8803 0.8803 2.5618 ( 1 20 28) 0 0.8803 0.8803 9 9 ( 989 1e0c_A) ( 2348 1hzm_A) 0.6041 0.6499 4.1284 ( 1 8 15) 0 0.6041 0.6499 9 8 ( 989 1e0c_A) ( 4688 1okg_A) 0.8889 0.9999 1.6988 ( 0 21 28) 0 0.8889 0.9999 9 8 ( 989 1e0c_A) ( 4689 1okg_A) 0.6667 0.8571 2.1588 ( 0 10 15) 0 0.6667 0.8571 9 7 ( 989 1e0c_A) ( 5274 1qb0_A) 0.8817 0.8817 2.9629 ( 1 21 28) 0 0.8817 0.8817 9 9 ( 989 1e0c_A) ( 5487 1qxn_A) 0.8818 0.7247 2.4913 ( 1 21 28) 0 0.8818 0.7247 9 11 ( 989 1e0c_A) ( 5635 1rhs ) 0.8889 0.9999 1.4918 ( 0 22 28) 0 0.8889 0.9999 9 8 ( 989 1e0c_A) ( 5636 1rhs ) 0.8889 0.9999 1.7679 ( 0 21 28) 0 0.8889 0.9999 9 8 ( 989 1e0c_A) ( 6087 1urh_A) 0.8889 0.9999 1.2863 ( 0 22 28) 0 0.8889 0.9999 9 8 ( 989 1e0c_A) ( 6088 1urh_A) 0.6667 0.9999 2.2268 ( 0 11 15) 0 0.6667 0.9999 9 6 -------------------------------------------------------------------------------------------------------------------------