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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:
HELIX min length: 5 STRAND min length: 3
shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100
anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12
Legend:
( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2
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( 1021 1e3m_A) ( 247 1az9 ) 0.6956 0.4886 5.6383 ( 1 9 21) 0 0.9793 0.6405 9 14
( 1021 1e3m_A) ( 345 1bco ) 0.8287 0.7031 6.9643 ( 1 12 28) 0 0.8287 0.7031 9 11
( 1021 1e3m_A) ( 463 1bu6_O) 0.6666 0.3333 3.6793 ( 0 6 15) 0 0.6666 0.3481 9 18
( 1021 1e3m_A) ( 464 1bu6_O) 0.4441 0.2353 8.3780 ( 0 1 6) 0 0.8175 0.5173 9 17
( 1021 1e3m_A) ( 471 1bup_A) 0.4444 0.2500 3.8009 ( 0 3 6) 0 0.4444 0.3441 9 16
( 1021 1e3m_A) ( 472 1bup_A) 0.4397 0.3322 16.4447 ( 0 1 6) 0 0.4397 0.3671 9 12
( 1021 1e3m_A) ( 592 1chm_A) 0.4444 0.3333 5.2087 ( 0 1 6) 0 0.8398 0.6997 9 12
( 1021 1e3m_A) ( 703 1cxq_A) 0.4444 0.3999 5.9914 ( 0 2 6) 0 0.4667 0.4531 9 10
( 1021 1e3m_A) ( 713 1cza_N) 0.4806 0.4718 5.1051 ( 2 10 21) 0 0.4806 0.4718 9 10
( 1021 1e3m_A) ( 714 1cza_N) 0.5309 0.4707 7.9277 ( 2 11 28) 0 0.5309 0.4707 9 14
( 1021 1e3m_A) ( 934 1dt9_A) 0.8882 0.8882 4.1702 ( 0 13 28) 0 0.8882 0.8882 9 9
( 1021 1e3m_A) ( 1021 1e3m_A) 1.0000 1.0000 0.0000 ( 0 20 36) 0 1.0000 1.0000 9 9
( 1021 1e3m_A) ( 1033 1e4f_T) 0.4442 0.2857 7.5899 ( 0 1 6) 0 0.4442 0.3966 9 14
( 1021 1e3m_A) ( 1034 1e4f_T) 0.7772 0.5384 4.7968 ( 0 6 21) 0 0.7772 0.5384 9 13
( 1021 1e3m_A) ( 1191 1eke_A) 0.4444 0.2857 4.6913 ( 0 0 6) 0 0.4444 0.2857 9 14
( 1021 1e3m_A) ( 1223 1eo1_A) 0.8885 0.9994 3.5772 ( 0 13 28) 0 0.8885 0.9994 9 8
( 1021 1e3m_A) ( 1289 1ewq_A) 0.8322 0.7647 2.4431 ( 1 12 28) 0 0.8322 0.7647 9 10
( 1021 1e3m_A) ( 1305 1exq_A) 0.6658 0.6658 6.4093 ( 0 5 15) 0 0.6952 0.6952 9 9
( 1021 1e3m_A) ( 1522 1fjg_K) 0.7776 0.9992 3.7552 ( 0 6 21) 0 0.7776 0.9992 9 7
( 1021 1e3m_A) ( 1656 1fxx_A) 0.8681 0.2580 4.5628 ( 1 16 28) 0 0.8681 0.2580 9 31
( 1021 1e3m_A) ( 1778 1g99_A) 0.5555 0.4545 4.3869 ( 0 4 10) 0 0.5555 0.4545 9 11
( 1021 1e3m_A) ( 1779 1g99_A) 0.0999 0.0994 9.2745 ( 1 1 6) 0 0.8882 0.5000 9 16
( 1021 1e3m_A) ( 2218 1hjr_A) 0.9707 0.8823 4.5450 ( 1 17 36) 0 0.9707 0.8823 9 10
( 1021 1e3m_A) ( 2296 1hux_A) 0.8683 0.4438 4.2770 ( 1 16 28) 0 0.8683 0.4438 9 18
( 1021 1e3m_A) ( 2378 1i39_A) 0.4444 0.3077 4.6369 ( 0 0 6) 0 0.4444 0.3133 9 13
( 1021 1e3m_A) ( 2483 1ig8_A) 0.3769 0.3556 5.8240 ( 1 4 10) 0 0.3933 0.3857 9 11
( 1021 1e3m_A) ( 2484 1ig8_A) 0.4880 0.4332 7.0196 ( 2 10 28) 0 0.4880 0.4332 9 15
( 1021 1e3m_A) ( 2491 1ih7_A) 0.8551 0.2961 4.8213 ( 1 14 28) 0 0.8551 0.3309 9 27
( 1021 1e3m_A) ( 2619 1iv0_A) 0.7777 0.9996 3.1757 ( 0 7 21) 0 0.7777 0.9996 9 7
( 1021 1e3m_A) ( 2733 1j54_A) 0.7775 0.5833 3.9323 ( 0 11 21) 0 0.8672 0.6613 9 12
( 1021 1e3m_A) ( 2775 1j9a_A) 0.8320 0.5643 3.7409 ( 1 12 28) 0 0.8320 0.5643 9 14
( 1021 1e3m_A) ( 2821 1jce_A) 0.6960 0.5600 4.0752 ( 1 9 21) 0 0.6960 0.5600 9 12
( 1021 1e3m_A) ( 2822 1jce_A) 0.5314 0.4552 4.4960 ( 2 11 28) 0 0.5314 0.4552 9 15
( 1021 1e3m_A) ( 2910 1jj2_M) 0.4444 0.3636 3.1147 ( 0 2 6) 0 0.6664 0.5454 9 11
( 1021 1e3m_A) ( 2954 1jl1_A) 0.5553 0.4999 5.7522 ( 0 3 10) 0 0.5553 0.4999 9 10
( 1021 1e3m_A) ( 3210 1k8k_A) 0.5553 0.3125 6.0263 ( 0 2 10) 0 0.5553 0.3125 9 16
( 1021 1e3m_A) ( 3260 1kcf_A) 0.9970 0.7493 5.3219 ( 0 18 36) 0 0.9970 0.7493 9 12
( 1021 1e3m_A) ( 3286 1kfs_A) 0.8455 0.6555 4.2937 ( 1 13 28) 0 0.8455 0.6659 9 12
( 1021 1e3m_A) ( 3925 1mgt_A) 0.4444 0.6662 5.6311 ( 0 0 6) 0 0.4444 0.6662 9 6
( 1021 1e3m_A) ( 4043 1mus_A) 0.6758 0.2945 6.7449 ( 2 15 28) 0 0.6758 0.3277 9 27
( 1021 1e3m_A) ( 4057 1mwm_A) 0.7773 0.6362 4.6245 ( 0 6 21) 0 0.7773 0.6362 9 11
( 1021 1e3m_A) ( 4058 1mwm_A) 0.4443 0.3636 6.2229 ( 0 2 6) 0 0.4443 0.3636 9 11
( 1021 1e3m_A) ( 4191 1nbw_A) 0.7871 0.4402 3.8568 ( 1 10 28) 0 0.7871 0.4402 9 18
( 1021 1e3m_A) ( 4193 1nbw_A) 0.7769 0.4374 5.4082 ( 0 6 21) 0 0.7769 0.4530 9 16
( 1021 1e3m_A) ( 4281 1nk4_A) 0.8680 0.6615 4.6976 ( 1 16 28) 0 0.8680 0.6615 9 12
( 1021 1e3m_A) ( 4391 1nu0_A) 0.8875 0.9976 5.0308 ( 0 13 28) 0 0.8875 0.9976 9 8
( 1021 1e3m_A) ( 4469 1o13_A) 0.8885 0.9994 3.6012 ( 0 14 28) 0 0.8885 0.9994 9 8
( 1021 1e3m_A) ( 4935 1p90_A) 0.8555 0.7797 4.1556 ( 1 14 28) 0 0.8555 0.7797 9 10
( 1021 1e3m_A) ( 5120 1pv9_A) 0.4444 0.3333 5.3018 ( 0 4 6) 0 0.8711 0.6623 9 12
( 1021 1e3m_A) ( 5243 1q8i_A) 0.8679 0.2856 4.7789 ( 1 16 28) 0 0.8679 0.2856 9 28
( 1021 1e3m_A) ( 5447 1qtm_A) 0.6665 0.6665 4.2220 ( 0 6 15) 0 0.6665 0.6665 9 9
( 1021 1e3m_A) ( 5500 1qz5_A) 0.4444 0.3636 6.1174 ( 0 4 6) 0 0.4444 0.3753 9 11
( 1021 1e3m_A) ( 5501 1qz5_A) 0.4440 0.2222 9.2543 ( 0 0 6) 0 0.4442 0.2222 9 18
( 1021 1e3m_A) ( 5883 1t7p_A) 0.7776 0.5833 3.4811 ( 0 11 21) 0 0.7776 0.5833 9 12
( 1021 1e3m_A) ( 5906 1tgo_A) 0.8878 0.2963 4.7464 ( 0 15 28) 0 0.8878 0.2963 9 27
( 1021 1e3m_A) ( 6064 1uoc_A) 0.8879 0.4705 4.6432 ( 0 15 28) 0 0.8879 0.4792 9 17
( 1021 1e3m_A) ( 6249 1vhx_A) 0.8881 0.7995 4.4602 ( 0 13 28) 0 0.8881 0.7995 9 10
( 1021 1e3m_A) ( 6299 1vk0_A) 0.7769 0.4666 5.2706 ( 0 13 21) 0 0.7769 0.4666 9 15
( 1021 1e3m_A) ( 6323 1vrt_A) 0.7774 0.8743 4.2806 ( 0 7 21) 0 0.7774 0.8743 9 8
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