------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 1033 1e4f_T) ( 247 1az9 ) 0.2857 0.2857 5.5640 ( 0 4 6) 0 0.5452 0.5452 14 14 ( 1033 1e4f_T) ( 345 1bco ) 0.3569 0.4538 9.9674 ( 0 7 10) 0 0.3571 0.4545 14 11 ( 1033 1e4f_T) ( 463 1bu6_O) 0.5714 0.4757 8.1407 ( 3 22 36) 0 0.5714 0.4757 14 18 ( 1033 1e4f_T) ( 464 1bu6_O) 0.5703 0.4702 5.0921 ( 1 20 28) 0 0.5703 0.4702 14 17 ( 1033 1e4f_T) ( 471 1bup_A) 0.5714 0.5000 4.1639 ( 0 23 28) 0 0.5714 0.5000 14 16 ( 1033 1e4f_T) ( 472 1bup_A) 0.5000 0.5833 3.1906 ( 0 14 21) 0 0.5000 0.5833 14 12 ( 1033 1e4f_T) ( 592 1chm_A) 0.5703 0.6642 5.4214 ( 1 20 28) 0 0.5703 0.6642 14 12 ( 1033 1e4f_T) ( 703 1cxq_A) 0.4998 0.6990 6.2304 ( 0 15 21) 0 0.4998 0.6990 14 10 ( 1033 1e4f_T) ( 713 1cza_N) 0.5714 0.7999 3.2439 ( 0 22 28) 0 0.5714 0.7999 14 10 ( 1033 1e4f_T) ( 714 1cza_N) 0.3571 0.3571 7.8674 ( 0 4 10) 0 0.3571 0.3571 14 14 ( 1033 1e4f_T) ( 934 1dt9_A) 0.5000 0.7774 4.1694 ( 0 15 21) 0 0.5000 0.7774 14 9 ( 1033 1e4f_T) ( 1021 1e3m_A) 0.2857 0.4442 7.5899 ( 0 1 6) 0 0.3966 0.4442 14 9 ( 1033 1e4f_T) ( 1033 1e4f_T) 1.0000 1.0000 0.0000 ( 0 78 91) 0 1.0000 1.0000 14 14 ( 1033 1e4f_T) ( 1034 1e4f_T) 0.5714 0.6153 3.8951 ( 0 23 28) 0 0.5714 0.6153 14 13 ( 1033 1e4f_T) ( 1191 1eke_A) 0.5712 0.5712 5.3005 ( 0 20 28) 0 0.5712 0.5712 14 14 ( 1033 1e4f_T) ( 1223 1eo1_A) 0.5000 0.8743 4.3086 ( 0 12 21) 0 0.5000 0.8743 14 8 ( 1033 1e4f_T) ( 1289 1ewq_A) 0.4999 0.6997 4.7169 ( 0 12 21) 0 0.4999 0.6997 14 10 ( 1033 1e4f_T) ( 1305 1exq_A) 0.2855 0.4421 13.7517 ( 0 4 6) 0 0.2855 0.4421 14 9 ( 1033 1e4f_T) ( 1522 1fjg_K) 0.4999 0.9966 5.4688 ( 0 11 21) 0 0.4999 0.9966 14 7 ( 1033 1e4f_T) ( 1656 1fxx_A) 0.2856 0.1290 9.7202 ( 0 4 6) 0 0.3285 0.2609 14 31 ( 1033 1e4f_T) ( 1778 1g99_A) 0.5712 0.7265 5.5600 ( 0 16 28) 0 0.5712 0.7265 14 11 ( 1033 1e4f_T) ( 1779 1g99_A) 0.5702 0.4994 6.0246 ( 1 20 28) 0 0.5702 0.4994 14 16 ( 1033 1e4f_T) ( 2218 1hjr_A) 0.5713 0.7992 4.9790 ( 0 16 28) 0 0.5713 0.7992 14 10 ( 1033 1e4f_T) ( 2296 1hux_A) 0.5000 0.3889 3.4473 ( 0 16 21) 0 0.5587 0.4407 14 18 ( 1033 1e4f_T) ( 2378 1i39_A) 0.5000 0.5384 4.3092 ( 0 15 21) 0 0.5000 0.5384 14 13 ( 1033 1e4f_T) ( 2483 1ig8_A) 0.5714 0.7271 3.7363 ( 0 19 28) 0 0.5714 0.7271 14 11 ( 1033 1e4f_T) ( 2484 1ig8_A) 0.3525 0.3486 7.5336 ( 6 22 28) 0 0.3525 0.3486 14 15 ( 1033 1e4f_T) ( 2491 1ih7_A) 0.2857 0.1481 5.4397 ( 0 6 6) 0 0.4584 0.3021 14 27 ( 1033 1e4f_T) ( 2619 1iv0_A) 0.4718 0.6628 5.7789 ( 2 14 21) 0 0.4718 0.8560 14 7 ( 1033 1e4f_T) ( 2733 1j54_A) 0.4986 0.5804 6.2276 ( 1 16 21) 0 0.4986 0.5804 14 12 ( 1033 1e4f_T) ( 2775 1j9a_A) 0.2855 0.2855 13.3844 ( 0 5 6) 0 0.2856 0.2856 14 14 ( 1033 1e4f_T) ( 2821 1jce_A) 0.5714 0.6666 3.5477 ( 0 22 28) 0 0.5714 0.6666 14 12 ( 1033 1e4f_T) ( 2822 1jce_A) 0.5713 0.5333 4.4203 ( 0 23 28) 0 0.6406 0.5984 14 15 ( 1033 1e4f_T) ( 2910 1jj2_M) 0.4281 0.5438 9.8245 ( 0 6 15) 0 0.4284 0.5449 14 11 ( 1033 1e4f_T) ( 2954 1jl1_A) 0.4285 0.5996 6.2305 ( 0 8 15) 0 0.4637 0.5996 14 10 ( 1033 1e4f_T) ( 3210 1k8k_A) 0.4996 0.4373 7.6400 ( 0 15 21) 0 0.4996 0.4373 14 16 ( 1033 1e4f_T) ( 3260 1kcf_A) 0.4279 0.4985 10.6117 ( 0 8 15) 0 0.5697 0.6630 14 12 ( 1033 1e4f_T) ( 3286 1kfs_A) 0.2856 0.3331 10.6532 ( 0 5 6) 0 0.3962 0.4389 14 12 ( 1033 1e4f_T) ( 3925 1mgt_A) 0.2857 0.6656 6.8257 ( 0 3 6) 0 0.2857 0.6659 14 6 ( 1033 1e4f_T) ( 4043 1mus_A) 0.3571 0.1852 5.6488 ( 0 6 10) 0 0.5702 0.3092 14 27 ( 1033 1e4f_T) ( 4057 1mwm_A) 0.5707 0.7249 4.3056 ( 1 22 28) 0 0.5707 0.7249 14 11 ( 1033 1e4f_T) ( 4058 1mwm_A) 0.2857 0.3635 8.6147 ( 0 3 6) 0 0.2857 0.3635 14 11 ( 1033 1e4f_T) ( 4191 1nbw_A) 0.5706 0.4442 4.3412 ( 1 21 28) 0 0.5706 0.4442 14 18 ( 1033 1e4f_T) ( 4193 1nbw_A) 0.5701 0.4993 6.1975 ( 1 20 28) 0 0.5701 0.4993 14 16 ( 1033 1e4f_T) ( 4281 1nk4_A) 0.3561 0.4144 14.8306 ( 0 7 10) 0 0.3561 0.4144 14 12 ( 1033 1e4f_T) ( 4391 1nu0_A) 0.4999 0.8741 4.5852 ( 0 13 21) 0 0.4999 0.8741 14 8 ( 1033 1e4f_T) ( 4469 1o13_A) 0.4984 0.8508 4.3393 ( 1 15 21) 0 0.4984 0.8508 14 8 ( 1033 1e4f_T) ( 4935 1p90_A) 0.5000 0.6998 3.9208 ( 0 15 21) 0 0.5000 0.6998 14 10 ( 1033 1e4f_T) ( 5120 1pv9_A) 0.2857 0.3332 9.4582 ( 0 5 6) 0 0.5702 0.6640 14 12 ( 1033 1e4f_T) ( 5243 1q8i_A) 0.4285 0.2143 5.9907 ( 0 7 15) 0 0.4285 0.2378 14 28 ( 1033 1e4f_T) ( 5447 1qtm_A) 0.2857 0.4441 8.4584 ( 0 3 6) 0 0.2857 0.4441 14 9 ( 1033 1e4f_T) ( 5500 1qz5_A) 0.5714 0.7270 4.2581 ( 0 19 28) 0 0.5714 0.7270 14 11 ( 1033 1e4f_T) ( 5501 1qz5_A) 0.4998 0.3888 6.4090 ( 0 14 21) 0 0.4998 0.3888 14 18 ( 1033 1e4f_T) ( 5883 1t7p_A) 0.2857 0.3333 7.0357 ( 0 3 6) 0 0.3812 0.3977 14 12 ( 1033 1e4f_T) ( 5906 1tgo_A) 0.4285 0.2222 6.0980 ( 0 9 15) 0 0.5639 0.2960 14 27 ( 1033 1e4f_T) ( 6064 1uoc_A) 0.2857 0.2353 9.6320 ( 0 5 6) 0 0.3670 0.3411 14 17 ( 1033 1e4f_T) ( 6249 1vhx_A) 0.5699 0.7918 6.3969 ( 1 19 28) 0 0.5699 0.7918 14 10 ( 1033 1e4f_T) ( 6299 1vk0_A) 0.4249 0.3974 6.3977 ( 1 10 15) 0 0.4249 0.3974 14 15 ( 1033 1e4f_T) ( 6323 1vrt_A) 0.4718 0.6418 6.1741 ( 2 14 21) 0 0.4718 0.7488 14 8 -------------------------------------------------------------------------------------------------------------------------