------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 1223 1eo1_A) ( 247 1az9 ) 0.6246 0.3571 5.6818 ( 0 7 10) 0 0.9980 0.5713 8 14 ( 1223 1eo1_A) ( 345 1bco ) 0.8740 0.6362 4.7938 ( 0 9 21) 0 0.8740 0.6362 8 11 ( 1223 1eo1_A) ( 463 1bu6_O) 0.8744 0.3889 4.2458 ( 0 11 21) 0 0.8744 0.3889 8 18 ( 1223 1eo1_A) ( 464 1bu6_O) 0.4998 0.2353 6.2043 ( 0 5 6) 0 0.9990 0.4706 8 17 ( 1223 1eo1_A) ( 471 1bup_A) 0.8745 0.4375 3.9760 ( 0 12 21) 0 0.8745 0.4375 8 16 ( 1223 1eo1_A) ( 472 1bup_A) 0.4996 0.3333 7.6120 ( 0 3 6) 0 0.4996 0.3333 8 12 ( 1223 1eo1_A) ( 592 1chm_A) 0.8745 0.5833 3.9029 ( 0 11 21) 0 0.9985 0.6665 8 12 ( 1223 1eo1_A) ( 703 1cxq_A) 0.8743 0.6998 4.2995 ( 0 11 21) 0 0.8743 0.6998 8 10 ( 1223 1eo1_A) ( 713 1cza_N) 0.8745 0.6998 3.9565 ( 0 12 21) 0 0.8745 0.6998 8 10 ( 1223 1eo1_A) ( 714 1cza_N) 0.8722 0.4998 6.1764 ( 0 10 21) 0 0.8722 0.4998 8 14 ( 1223 1eo1_A) ( 934 1dt9_A) 0.9996 0.8887 3.2531 ( 0 19 28) 0 0.9996 0.8887 8 9 ( 1223 1eo1_A) ( 1021 1e3m_A) 0.9994 0.8885 3.5772 ( 0 13 28) 0 0.9994 0.8885 8 9 ( 1223 1eo1_A) ( 1033 1e4f_T) 0.8743 0.5000 4.3086 ( 0 12 21) 0 0.8743 0.5000 8 14 ( 1223 1eo1_A) ( 1034 1e4f_T) 0.8747 0.5384 3.5286 ( 0 12 21) 0 0.8747 0.5384 8 13 ( 1223 1eo1_A) ( 1191 1eke_A) 0.4999 0.2857 5.7180 ( 0 3 6) 0 0.4999 0.3790 8 14 ( 1223 1eo1_A) ( 1223 1eo1_A) 1.0000 1.0000 0.0000 ( 0 19 28) 0 1.0000 1.0000 8 8 ( 1223 1eo1_A) ( 1289 1ewq_A) 0.9993 0.7998 3.6558 ( 0 15 28) 0 0.9993 0.7998 8 10 ( 1223 1eo1_A) ( 1305 1exq_A) 0.7495 0.6664 4.8190 ( 0 7 15) 0 0.7497 0.6665 8 9 ( 1223 1eo1_A) ( 1522 1fjg_K) 0.8741 0.9982 4.6674 ( 0 11 21) 0 0.8741 0.9982 8 7 ( 1223 1eo1_A) ( 1656 1fxx_A) 0.9950 0.2581 6.0452 ( 0 16 28) 0 0.9950 0.2581 8 31 ( 1223 1eo1_A) ( 1778 1g99_A) 0.8744 0.6362 4.1462 ( 0 11 21) 0 0.8744 0.6362 8 11 ( 1223 1eo1_A) ( 1779 1g99_A) 0.4980 0.2499 11.3784 ( 0 5 6) 0 0.9993 0.5000 8 16 ( 1223 1eo1_A) ( 2218 1hjr_A) 0.9982 0.7994 4.6571 ( 0 18 28) 0 0.9982 0.7994 8 10 ( 1223 1eo1_A) ( 2296 1hux_A) 0.8743 0.3889 4.3162 ( 0 14 21) 0 0.8745 0.3889 8 18 ( 1223 1eo1_A) ( 2378 1i39_A) 0.4998 0.3077 6.7100 ( 0 1 6) 0 0.4998 0.3568 8 13 ( 1223 1eo1_A) ( 2483 1ig8_A) 0.8746 0.6363 3.8041 ( 0 11 21) 0 0.8746 0.6363 8 11 ( 1223 1eo1_A) ( 2484 1ig8_A) 0.8723 0.4665 6.1276 ( 0 10 21) 0 0.8723 0.4665 8 15 ( 1223 1eo1_A) ( 2491 1ih7_A) 0.6241 0.1852 7.1543 ( 0 3 10) 0 0.6241 0.2671 8 27 ( 1223 1eo1_A) ( 2619 1iv0_A) 0.8747 0.9994 3.5040 ( 0 11 21) 0 0.8747 0.9994 8 7 ( 1223 1eo1_A) ( 2733 1j54_A) nil ( 1223 1eo1_A) ( 2775 1j9a_A) 0.8732 0.4999 5.4942 ( 0 14 21) 0 0.8732 0.4999 8 14 ( 1223 1eo1_A) ( 2821 1jce_A) 0.8748 0.5833 2.9659 ( 0 11 21) 0 0.8748 0.5833 8 12 ( 1223 1eo1_A) ( 2822 1jce_A) 0.8748 0.4667 3.1374 ( 0 12 21) 0 0.8748 0.4667 8 15 ( 1223 1eo1_A) ( 2910 1jj2_M) 0.7458 0.5446 8.2789 ( 0 9 15) 0 0.8738 0.6361 8 11 ( 1223 1eo1_A) ( 2954 1jl1_A) 0.6244 0.4998 6.3100 ( 0 3 10) 0 0.6244 0.4998 8 10 ( 1223 1eo1_A) ( 3210 1k8k_A) 0.4997 0.2500 7.0151 ( 0 3 6) 0 0.4997 0.2887 8 16 ( 1223 1eo1_A) ( 3260 1kcf_A) 0.9966 0.6662 5.4869 ( 0 17 28) 0 0.9966 0.6662 8 12 ( 1223 1eo1_A) ( 3286 1kfs_A) 0.7496 0.4999 4.5458 ( 0 10 15) 0 0.7496 0.4999 8 12 ( 1223 1eo1_A) ( 3925 1mgt_A) 0.2910 0.2970 6.2591 ( 1 3 6) 0 0.2910 0.2970 8 6 ( 1223 1eo1_A) ( 4043 1mus_A) 0.8728 0.2593 5.7762 ( 0 9 21) 0 0.8728 0.2593 8 27 ( 1223 1eo1_A) ( 4057 1mwm_A) 0.6223 0.4540 9.2979 ( 0 5 10) 0 0.6223 0.4540 8 11 ( 1223 1eo1_A) ( 4058 1mwm_A) 0.3666 0.3190 11.9726 ( 1 4 6) 0 0.3666 0.3190 8 11 ( 1223 1eo1_A) ( 4191 1nbw_A) 0.8747 0.3889 3.5388 ( 0 11 21) 0 0.8747 0.3889 8 18 ( 1223 1eo1_A) ( 4193 1nbw_A) 0.8744 0.4375 4.2347 ( 0 12 21) 0 0.8744 0.4887 8 16 ( 1223 1eo1_A) ( 4281 1nk4_A) 0.7497 0.5000 4.2841 ( 0 10 15) 0 0.7497 0.5000 8 12 ( 1223 1eo1_A) ( 4391 1nu0_A) 0.9973 0.9973 5.1499 ( 0 18 28) 0 0.9973 0.9973 8 8 ( 1223 1eo1_A) ( 4469 1o13_A) 0.9999 0.9999 2.1548 ( 0 19 28) 0 0.9999 0.9999 8 8 ( 1223 1eo1_A) ( 4935 1p90_A) 0.9999 0.8000 2.4895 ( 0 19 28) 0 0.9999 0.8000 8 10 ( 1223 1eo1_A) ( 5120 1pv9_A) 0.8747 0.5833 3.4946 ( 0 11 21) 0 0.9993 0.6666 8 12 ( 1223 1eo1_A) ( 5243 1q8i_A) 0.8736 0.2500 5.1906 ( 0 13 21) 0 0.8736 0.2500 8 28 ( 1223 1eo1_A) ( 5447 1qtm_A) 0.6248 0.5555 4.7302 ( 0 6 10) 0 0.6248 0.5555 8 9 ( 1223 1eo1_A) ( 5500 1qz5_A) 0.8749 0.6363 2.8712 ( 0 10 21) 0 0.8749 0.6363 8 11 ( 1223 1eo1_A) ( 5501 1qz5_A) 0.4998 0.2222 6.2952 ( 0 2 6) 0 0.7461 0.3333 8 18 ( 1223 1eo1_A) ( 5883 1t7p_A) 0.6080 0.5147 5.2957 ( 2 13 21) 0 0.8731 0.5831 8 12 ( 1223 1eo1_A) ( 5906 1tgo_A) 0.8726 0.2593 5.8993 ( 0 15 21) 0 0.8726 0.2593 8 27 ( 1223 1eo1_A) ( 6064 1uoc_A) 0.4997 0.2353 6.8917 ( 0 5 6) 0 0.8729 0.4117 8 17 ( 1223 1eo1_A) ( 6249 1vhx_A) 0.9979 0.7993 4.8731 ( 0 19 28) 0 0.9979 0.7993 8 10 ( 1223 1eo1_A) ( 6299 1vk0_A) 0.8723 0.4665 6.0996 ( 0 13 21) 0 0.8723 0.4665 8 15 ( 1223 1eo1_A) ( 6323 1vrt_A) 0.8744 0.8744 4.1765 ( 0 10 21) 0 0.8744 0.8744 8 8 -------------------------------------------------------------------------------------------------------------------------