------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 1289 1ewq_A) ( 247 1az9 ) 0.7000 0.5000 2.3499 ( 0 10 21) 0 0.7998 0.5714 10 14 ( 1289 1ewq_A) ( 345 1bco ) 0.7971 0.7254 6.9815 ( 0 13 28) 0 0.7971 0.7254 10 11 ( 1289 1ewq_A) ( 463 1bu6_O) 0.6999 0.3889 3.1611 ( 0 10 21) 0 0.6999 0.3889 10 18 ( 1289 1ewq_A) ( 464 1bu6_O) 0.4824 0.2928 6.3197 ( 1 8 10) 0 0.7995 0.4705 10 17 ( 1289 1ewq_A) ( 471 1bup_A) 0.6997 0.4375 4.6758 ( 0 11 21) 0 0.6997 0.4779 10 16 ( 1289 1ewq_A) ( 472 1bup_A) 0.6000 0.5000 3.0303 ( 0 6 15) 0 0.6000 0.5000 10 12 ( 1289 1ewq_A) ( 592 1chm_A) 0.6999 0.5833 3.1740 ( 0 12 21) 0 0.6999 0.5833 10 12 ( 1289 1ewq_A) ( 703 1cxq_A) 0.6999 0.6999 3.3412 ( 0 10 21) 0 0.6999 0.6999 10 10 ( 1289 1ewq_A) ( 713 1cza_N) 0.6996 0.6996 4.9192 ( 0 11 21) 0 0.6996 0.6996 10 10 ( 1289 1ewq_A) ( 714 1cza_N) 0.7975 0.5710 6.6994 ( 0 16 28) 0 0.7975 0.5710 10 14 ( 1289 1ewq_A) ( 934 1dt9_A) 0.7995 0.8880 4.5021 ( 0 15 28) 0 0.7995 0.8880 10 9 ( 1289 1ewq_A) ( 1021 1e3m_A) 0.7647 0.8322 2.4431 ( 1 12 28) 0 0.7647 0.8322 10 9 ( 1289 1ewq_A) ( 1033 1e4f_T) 0.6997 0.4999 4.7169 ( 0 12 21) 0 0.6997 0.4999 10 14 ( 1289 1ewq_A) ( 1034 1e4f_T) 0.6997 0.5384 4.6613 ( 0 11 21) 0 0.6997 0.5384 10 13 ( 1289 1ewq_A) ( 1191 1eke_A) 0.4999 0.3571 5.5732 ( 0 3 10) 0 0.4999 0.4256 10 14 ( 1289 1ewq_A) ( 1223 1eo1_A) 0.7998 0.9993 3.6558 ( 0 15 28) 0 0.7998 0.9993 10 8 ( 1289 1ewq_A) ( 1289 1ewq_A) 1.0000 1.0000 0.0000 ( 0 31 45) 0 1.0000 1.0000 10 10 ( 1289 1ewq_A) ( 1305 1exq_A) 0.6987 0.7756 6.7304 ( 0 9 21) 0 0.6990 0.7761 10 9 ( 1289 1ewq_A) ( 1522 1fjg_K) 0.6999 0.9992 3.8321 ( 0 10 21) 0 0.6999 0.9992 10 7 ( 1289 1ewq_A) ( 1656 1fxx_A) 0.7996 0.2581 4.2973 ( 0 14 28) 0 0.7996 0.2581 10 31 ( 1289 1ewq_A) ( 1778 1g99_A) 0.3999 0.3636 6.5055 ( 0 1 6) 0 0.6998 0.6362 10 11 ( 1289 1ewq_A) ( 1779 1g99_A) 0.3360 0.2412 12.5491 ( 1 4 6) 0 0.8995 0.5624 10 16 ( 1289 1ewq_A) ( 2218 1hjr_A) 0.7996 0.7996 4.2899 ( 0 17 28) 0 0.7996 0.7996 10 10 ( 1289 1ewq_A) ( 2296 1hux_A) 0.6998 0.3889 4.2627 ( 0 11 21) 0 0.6998 0.4364 10 18 ( 1289 1ewq_A) ( 2378 1i39_A) 0.4999 0.3846 5.5479 ( 0 3 10) 0 0.4999 0.3846 10 13 ( 1289 1ewq_A) ( 2483 1ig8_A) 0.7730 0.7101 4.9558 ( 1 13 28) 0 0.7730 0.7101 10 11 ( 1289 1ewq_A) ( 2484 1ig8_A) 0.7969 0.5329 7.0556 ( 0 17 28) 0 0.7969 0.5329 10 15 ( 1289 1ewq_A) ( 2491 1ih7_A) 0.7996 0.2963 4.2359 ( 0 14 28) 0 0.7996 0.3352 10 27 ( 1289 1ewq_A) ( 2619 1iv0_A) 0.6996 0.9978 4.9325 ( 0 12 21) 0 0.6996 0.9978 10 7 ( 1289 1ewq_A) ( 2733 1j54_A) 0.6999 0.5833 3.2157 ( 0 9 21) 0 0.6999 0.5833 10 12 ( 1289 1ewq_A) ( 2775 1j9a_A) 0.7996 0.5714 4.1805 ( 0 16 28) 0 0.7996 0.5714 10 14 ( 1289 1ewq_A) ( 2821 1jce_A) 0.6999 0.5833 3.3886 ( 0 10 21) 0 0.6999 0.5833 10 12 ( 1289 1ewq_A) ( 2822 1jce_A) 0.6998 0.4666 4.1962 ( 0 11 21) 0 0.6998 0.4666 10 15 ( 1289 1ewq_A) ( 2910 1jj2_M) 0.4999 0.4545 5.7019 ( 0 5 10) 0 0.4999 0.4545 10 11 ( 1289 1ewq_A) ( 2954 1jl1_A) 0.3998 0.3998 8.4351 ( 0 4 6) 0 0.3998 0.3998 10 10 ( 1289 1ewq_A) ( 3210 1k8k_A) 0.4718 0.3898 6.1399 ( 2 10 21) 0 0.4997 0.3898 10 16 ( 1289 1ewq_A) ( 3260 1kcf_A) 0.7994 0.6664 4.7405 ( 0 14 28) 0 0.7994 0.6664 10 12 ( 1289 1ewq_A) ( 3286 1kfs_A) 0.7997 0.6666 3.7996 ( 0 15 28) 0 0.7997 0.6666 10 12 ( 1289 1ewq_A) ( 3925 1mgt_A) 0.4997 0.8295 7.0763 ( 0 2 10) 0 0.4997 0.8295 10 6 ( 1289 1ewq_A) ( 4043 1mus_A) 0.5986 0.2222 8.2843 ( 0 9 15) 0 0.5986 0.2853 10 27 ( 1289 1ewq_A) ( 4057 1mwm_A) 0.7836 0.7169 5.4575 ( 1 15 28) 0 0.7836 0.7169 10 11 ( 1289 1ewq_A) ( 4058 1mwm_A) 0.2798 0.2725 14.2893 ( 1 3 6) 0 0.3405 0.3365 10 11 ( 1289 1ewq_A) ( 4191 1nbw_A) 0.6999 0.3889 3.5484 ( 0 10 21) 0 0.6999 0.3889 10 18 ( 1289 1ewq_A) ( 4193 1nbw_A) 0.7827 0.4983 6.4277 ( 1 15 28) 0 0.7827 0.4983 10 16 ( 1289 1ewq_A) ( 4281 1nk4_A) 0.7842 0.6602 4.2698 ( 1 15 28) 0 0.7842 0.6602 10 12 ( 1289 1ewq_A) ( 4391 1nu0_A) 0.7993 0.9980 4.8113 ( 0 16 28) 0 0.7993 0.9980 10 8 ( 1289 1ewq_A) ( 4469 1o13_A) 0.7879 0.9649 2.9488 ( 1 16 28) 0 0.7879 0.9649 10 8 ( 1289 1ewq_A) ( 4935 1p90_A) 0.7996 0.7996 4.2802 ( 0 16 28) 0 0.7996 0.7996 10 10 ( 1289 1ewq_A) ( 5120 1pv9_A) 0.7000 0.5833 2.4752 ( 0 12 21) 0 0.7997 0.6665 10 12 ( 1289 1ewq_A) ( 5243 1q8i_A) 0.7900 0.2857 4.5143 ( 1 17 28) 0 0.7900 0.2857 10 28 ( 1289 1ewq_A) ( 5447 1qtm_A) 0.5999 0.6664 4.5769 ( 0 7 15) 0 0.5999 0.6664 10 9 ( 1289 1ewq_A) ( 5500 1qz5_A) 0.6999 0.6363 3.3439 ( 0 8 21) 0 0.6999 0.6363 10 11 ( 1289 1ewq_A) ( 5501 1qz5_A) 0.5999 0.3333 4.0572 ( 0 5 15) 0 0.5999 0.3678 10 18 ( 1289 1ewq_A) ( 5883 1t7p_A) 0.6999 0.5833 2.9977 ( 0 9 21) 0 0.6999 0.5833 10 12 ( 1289 1ewq_A) ( 5906 1tgo_A) 0.7994 0.2963 4.7286 ( 0 16 28) 0 0.7994 0.2963 10 27 ( 1289 1ewq_A) ( 6064 1uoc_A) 0.7798 0.4691 3.8284 ( 1 14 28) 0 0.7798 0.4691 10 17 ( 1289 1ewq_A) ( 6249 1vhx_A) 0.7996 0.7996 4.1082 ( 0 15 28) 0 0.7996 0.7996 10 10 ( 1289 1ewq_A) ( 6299 1vk0_A) 0.6632 0.4613 4.2584 ( 1 10 21) 0 0.6632 0.5038 10 15 ( 1289 1ewq_A) ( 6323 1vrt_A) 0.7992 0.9976 4.9942 ( 0 14 28) 0 0.7992 0.9976 10 8 -------------------------------------------------------------------------------------------------------------------------