------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 1305 1exq_A) ( 247 1az9 ) 0.5554 0.3571 5.0550 ( 0 6 10) 0 0.5555 0.4389 9 14 ( 1305 1exq_A) ( 345 1bco ) 0.9275 0.7888 2.7692 ( 2 26 36) 0 0.9275 0.7888 9 11 ( 1305 1exq_A) ( 463 1bu6_O) 0.1980 0.1763 9.9562 ( 1 2 6) 0 0.3932 0.2420 9 18 ( 1305 1exq_A) ( 464 1bu6_O) 0.4441 0.2353 8.5088 ( 0 2 6) 0 0.4665 0.3339 9 17 ( 1305 1exq_A) ( 471 1bup_A) 0.5546 0.3124 8.3670 ( 0 8 10) 0 0.6393 0.4254 9 16 ( 1305 1exq_A) ( 472 1bup_A) 0.6663 0.4999 5.1762 ( 0 9 15) 0 0.6663 0.4999 9 12 ( 1305 1exq_A) ( 592 1chm_A) 0.5555 0.4167 4.2041 ( 0 5 10) 0 0.6659 0.4998 9 12 ( 1305 1exq_A) ( 703 1cxq_A) 0.8888 0.7999 2.6637 ( 0 22 28) 0 0.8888 0.7999 9 10 ( 1305 1exq_A) ( 713 1cza_N) 0.5553 0.4998 6.0542 ( 0 8 10) 0 0.6660 0.5996 9 10 ( 1305 1exq_A) ( 714 1cza_N) 0.4435 0.2856 10.8833 ( 0 4 6) 0 0.4435 0.3873 9 14 ( 1305 1exq_A) ( 934 1dt9_A) 0.5548 0.5548 7.8466 ( 0 5 10) 0 0.5548 0.5548 9 9 ( 1305 1exq_A) ( 1021 1e3m_A) 0.6658 0.6658 6.4093 ( 0 5 15) 0 0.6952 0.6952 9 9 ( 1305 1exq_A) ( 1033 1e4f_T) 0.2438 0.2226 17.3640 ( 2 5 6) 0 0.2438 0.2261 9 14 ( 1305 1exq_A) ( 1034 1e4f_T) 0.3933 0.2975 10.2779 ( 1 5 6) 0 0.4443 0.3077 9 13 ( 1305 1exq_A) ( 1191 1eke_A) 0.7774 0.5000 4.3977 ( 0 15 21) 0 0.7774 0.5000 9 14 ( 1305 1exq_A) ( 1223 1eo1_A) 0.6664 0.7495 4.8190 ( 0 7 15) 0 0.6665 0.7497 9 8 ( 1305 1exq_A) ( 1289 1ewq_A) 0.7756 0.6987 6.7304 ( 0 9 21) 0 0.7761 0.6990 9 10 ( 1305 1exq_A) ( 1305 1exq_A) 1.0000 1.0000 0.0000 ( 0 30 36) 0 1.0000 1.0000 9 9 ( 1305 1exq_A) ( 1522 1fjg_K) 0.6663 0.8557 5.3272 ( 0 6 15) 0 0.6663 0.8558 9 7 ( 1305 1exq_A) ( 1656 1fxx_A) 0.4443 0.1290 7.1199 ( 0 2 6) 0 0.4995 0.1928 9 31 ( 1305 1exq_A) ( 1778 1g99_A) 0.5554 0.4545 5.1202 ( 0 7 10) 0 0.6663 0.5453 9 11 ( 1305 1exq_A) ( 1779 1g99_A) 0.4442 0.2500 8.1082 ( 0 4 6) 0 0.6625 0.3748 9 16 ( 1305 1exq_A) ( 2218 1hjr_A) 0.6658 0.5995 6.3889 ( 0 7 15) 0 0.6658 0.5995 9 10 ( 1305 1exq_A) ( 2296 1hux_A) 0.5555 0.2778 4.2373 ( 0 6 10) 0 0.5555 0.2778 9 18 ( 1305 1exq_A) ( 2378 1i39_A) 0.7773 0.5384 4.6255 ( 0 16 21) 0 0.8831 0.6145 9 13 ( 1305 1exq_A) ( 2483 1ig8_A) 0.3928 0.3414 12.5868 ( 1 5 6) 0 0.5554 0.4545 9 11 ( 1305 1exq_A) ( 2484 1ig8_A) 0.4432 0.2666 11.6624 ( 0 2 6) 0 0.4443 0.2667 9 15 ( 1305 1exq_A) ( 2491 1ih7_A) 0.4443 0.1481 7.2256 ( 0 2 6) 0 0.5545 0.2810 9 27 ( 1305 1exq_A) ( 2619 1iv0_A) 0.6041 0.6946 3.6804 ( 1 8 15) 0 0.6241 0.7375 9 7 ( 1305 1exq_A) ( 2733 1j54_A) 0.5552 0.4166 6.2792 ( 0 1 10) 0 0.5552 0.4166 9 12 ( 1305 1exq_A) ( 2775 1j9a_A) 0.5553 0.3571 6.0387 ( 0 4 10) 0 0.5553 0.3961 9 14 ( 1305 1exq_A) ( 2821 1jce_A) 0.4443 0.3333 7.3064 ( 0 5 6) 0 0.5108 0.4044 9 12 ( 1305 1exq_A) ( 2822 1jce_A) 0.4443 0.2667 6.3958 ( 0 5 6) 0 0.4443 0.2667 9 15 ( 1305 1exq_A) ( 2910 1jj2_M) 0.6666 0.5454 3.9028 ( 0 9 15) 0 0.6666 0.5454 9 11 ( 1305 1exq_A) ( 2954 1jl1_A) 0.7769 0.6995 5.3187 ( 0 12 21) 0 0.7769 0.6995 9 10 ( 1305 1exq_A) ( 3210 1k8k_A) 0.4404 0.2498 15.7947 ( 0 4 6) 0 0.4404 0.2498 9 16 ( 1305 1exq_A) ( 3260 1kcf_A) 0.6660 0.4998 6.1473 ( 0 6 15) 0 0.7761 0.5829 9 12 ( 1305 1exq_A) ( 3286 1kfs_A) 0.6658 0.4998 6.4073 ( 0 9 15) 0 0.6658 0.4998 9 12 ( 1305 1exq_A) ( 3925 1mgt_A) 0.6664 0.9982 4.6624 ( 0 8 15) 0 0.6664 0.9982 9 6 ( 1305 1exq_A) ( 4043 1mus_A) 0.4437 0.1481 10.4449 ( 0 5 6) 0 0.9879 0.3333 9 27 ( 1305 1exq_A) ( 4057 1mwm_A) 0.5555 0.4545 4.5106 ( 0 8 10) 0 0.5555 0.4545 9 11 ( 1305 1exq_A) ( 4058 1mwm_A) 0.5545 0.4541 8.5832 ( 0 4 10) 0 0.5545 0.4541 9 11 ( 1305 1exq_A) ( 4191 1nbw_A) 0.6664 0.3333 4.7192 ( 0 9 15) 0 0.6665 0.3333 9 18 ( 1305 1exq_A) ( 4193 1nbw_A) 0.6661 0.3750 5.7878 ( 0 10 15) 0 0.6661 0.3750 9 16 ( 1305 1exq_A) ( 4281 1nk4_A) 0.4444 0.3333 3.2090 ( 0 3 6) 0 0.4444 0.3333 9 12 ( 1305 1exq_A) ( 4391 1nu0_A) 0.6656 0.7481 6.7884 ( 0 7 15) 0 0.6656 0.7481 9 8 ( 1305 1exq_A) ( 4469 1o13_A) 0.6665 0.7497 4.1232 ( 0 10 15) 0 0.6665 0.7497 9 8 ( 1305 1exq_A) ( 4935 1p90_A) 0.6663 0.5998 5.1442 ( 0 9 15) 0 0.6664 0.5998 9 10 ( 1305 1exq_A) ( 5120 1pv9_A) 0.6665 0.5000 4.1433 ( 0 8 15) 0 0.6665 0.5000 9 12 ( 1305 1exq_A) ( 5243 1q8i_A) 0.6663 0.2143 5.2159 ( 0 7 15) 0 0.6663 0.2486 9 28 ( 1305 1exq_A) ( 5447 1qtm_A) 0.4444 0.4444 5.8749 ( 0 5 6) 0 0.5546 0.5546 9 9 ( 1305 1exq_A) ( 5500 1qz5_A) 0.6664 0.5453 4.9671 ( 0 8 15) 0 0.7455 0.6238 9 11 ( 1305 1exq_A) ( 5501 1qz5_A) 0.4441 0.2222 8.2918 ( 0 6 6) 0 0.4441 0.2222 9 18 ( 1305 1exq_A) ( 5883 1t7p_A) 0.4443 0.3333 6.4369 ( 0 6 6) 0 0.4443 0.3333 9 12 ( 1305 1exq_A) ( 5906 1tgo_A) 0.5555 0.1852 2.7423 ( 0 6 10) 0 0.5701 0.2920 9 27 ( 1305 1exq_A) ( 6064 1uoc_A) 0.4442 0.2353 7.4086 ( 0 4 6) 0 0.6232 0.3508 9 17 ( 1305 1exq_A) ( 6249 1vhx_A) 0.6661 0.5997 5.7972 ( 0 8 15) 0 0.6661 0.5997 9 10 ( 1305 1exq_A) ( 6299 1vk0_A) 0.4439 0.2666 9.4242 ( 0 4 6) 0 0.4439 0.2666 9 15 ( 1305 1exq_A) ( 6323 1vrt_A) 0.5554 0.6248 5.0418 ( 0 4 10) 0 0.6370 0.6998 9 8 -------------------------------------------------------------------------------------------------------------------------