-------------------------------------------------------------------------------------------------------------------------
Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:
HELIX min length: 5 STRAND min length: 3
shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100
anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12
Legend:
( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2
-------------------------------------------------------------------------------------------------------------------------
( 1656 1fxx_A) ( 247 1az9 ) 0.1900 0.3294 5.5148 ( 3 11 15) 0 0.3143 0.5167 31 14
( 1656 1fxx_A) ( 345 1bco ) 0.1860 0.2935 7.5697 ( 3 9 15) 0 0.1988 0.5332 31 11
( 1656 1fxx_A) ( 463 1bu6_O) 0.1290 0.2222 8.1589 ( 0 3 6) 0 0.2672 0.3441 31 18
( 1656 1fxx_A) ( 464 1bu6_O) 0.1595 0.2658 6.7042 ( 2 7 10) 0 0.3224 0.5851 31 17
( 1656 1fxx_A) ( 471 1bup_A) 0.2228 0.3791 6.7548 ( 3 14 21) 0 0.2544 0.4302 31 16
( 1656 1fxx_A) ( 472 1bup_A) 0.1290 0.3330 11.7721 ( 0 4 6) 0 0.2075 0.4042 31 12
( 1656 1fxx_A) ( 592 1chm_A) 0.2580 0.6644 4.6319 ( 1 20 28) 0 0.3146 0.7468 31 12
( 1656 1fxx_A) ( 703 1cxq_A) 0.2258 0.6974 8.0325 ( 0 11 21) 0 0.2314 0.6974 31 10
( 1656 1fxx_A) ( 713 1cza_N) 0.1290 0.3960 17.9497 ( 0 5 6) 0 0.2578 0.7421 31 10
( 1656 1fxx_A) ( 714 1cza_N) 0.1290 0.2857 8.3670 ( 0 5 6) 0 0.2253 0.4776 31 14
( 1656 1fxx_A) ( 934 1dt9_A) 0.2826 0.4920 8.0726 ( 5 25 36) 0 0.2826 0.8852 31 9
( 1656 1fxx_A) ( 1021 1e3m_A) 0.2580 0.8681 4.5628 ( 1 16 28) 0 0.2580 0.8681 31 9
( 1656 1fxx_A) ( 1033 1e4f_T) 0.1378 0.1647 8.0783 ( 3 5 10) 0 0.2609 0.3285 31 14
( 1656 1fxx_A) ( 1034 1e4f_T) 0.2537 0.4567 6.1046 ( 4 20 28) 0 0.2537 0.5365 31 13
( 1656 1fxx_A) ( 1191 1eke_A) 0.2272 0.2814 7.2624 ( 7 20 28) 0 0.2272 0.3571 31 14
( 1656 1fxx_A) ( 1223 1eo1_A) 0.2581 0.9950 6.0452 ( 0 16 28) 0 0.2581 0.9950 31 8
( 1656 1fxx_A) ( 1289 1ewq_A) 0.2581 0.7996 4.2973 ( 0 14 28) 0 0.2581 0.7996 31 10
( 1656 1fxx_A) ( 1305 1exq_A) 0.1893 0.3436 6.8245 ( 2 7 15) 0 0.1928 0.5555 31 9
( 1656 1fxx_A) ( 1522 1fjg_K) 0.2258 0.9983 4.5847 ( 0 10 21) 0 0.2258 0.9983 31 7
( 1656 1fxx_A) ( 1656 1fxx_A) 1.0000 1.0000 0.0000 ( 0 408 465) 0 1.0000 1.0000 31 31
( 1656 1fxx_A) ( 1778 1g99_A) 0.1289 0.3419 5.2469 ( 1 5 6) 0 0.2515 0.4347 31 11
( 1656 1fxx_A) ( 1779 1g99_A) 0.2258 0.4374 5.9873 ( 0 13 21) 0 0.2581 0.4998 31 16
( 1656 1fxx_A) ( 2218 1hjr_A) 0.2581 0.7987 5.7072 ( 0 20 28) 0 0.2581 0.7987 31 10
( 1656 1fxx_A) ( 2296 1hux_A) 0.1612 0.2769 13.4111 ( 1 9 10) 0 0.2826 0.4203 31 18
( 1656 1fxx_A) ( 2378 1i39_A) 0.2515 0.4225 6.3826 ( 4 18 28) 0 0.2515 0.4608 31 13
( 1656 1fxx_A) ( 2483 1ig8_A) 0.2580 0.7188 5.9431 ( 1 16 28) 0 0.2580 0.7188 31 11
( 1656 1fxx_A) ( 2484 1ig8_A) 0.1290 0.2666 11.5686 ( 0 6 6) 0 0.2314 0.2929 31 15
( 1656 1fxx_A) ( 2491 1ih7_A) 0.2623 0.2714 5.0111 ( 15 43 55) 0 0.4506 0.5166 31 27
( 1656 1fxx_A) ( 2619 1iv0_A) 0.2247 0.5819 4.6978 ( 2 12 21) 0 0.2247 0.8570 31 7
( 1656 1fxx_A) ( 2733 1j54_A) 0.3871 0.9952 2.3264 ( 2 54 66) 0 0.3871 0.9952 31 12
( 1656 1fxx_A) ( 2775 1j9a_A) 0.2581 0.5714 2.8768 ( 0 23 28) 0 0.3538 0.7373 31 14
( 1656 1fxx_A) ( 2821 1jce_A) 0.2569 0.5736 5.1416 ( 2 14 28) 0 0.2569 0.5736 31 12
( 1656 1fxx_A) ( 2822 1jce_A) 0.2563 0.4815 6.2872 ( 3 19 28) 0 0.2563 0.4815 31 15
( 1656 1fxx_A) ( 2910 1jj2_M) 0.1935 0.5453 4.9775 ( 0 7 15) 0 0.2435 0.5453 31 11
( 1656 1fxx_A) ( 2954 1jl1_A) 0.2075 0.2370 7.3027 ( 8 19 28) 0 0.2109 0.4998 31 10
( 1656 1fxx_A) ( 3210 1k8k_A) 0.1290 0.2500 10.5381 ( 0 5 6) 0 0.2075 0.2572 31 16
( 1656 1fxx_A) ( 3260 1kcf_A) 0.3217 0.7530 6.9739 ( 3 30 45) 0 0.3217 0.7530 31 12
( 1656 1fxx_A) ( 3286 1kfs_A) 0.3225 0.8215 3.5955 ( 2 34 45) 0 0.3544 0.8711 31 12
( 1656 1fxx_A) ( 3925 1mgt_A) 0.1280 0.2970 8.1423 ( 1 3 6) 0 0.1280 0.2970 31 6
( 1656 1fxx_A) ( 4043 1mus_A) 0.1935 0.2222 8.7088 ( 0 11 15) 0 0.3088 0.3165 31 27
( 1656 1fxx_A) ( 4057 1mwm_A) 0.2258 0.6321 5.3694 ( 1 16 21) 0 0.2579 0.6946 31 11
( 1656 1fxx_A) ( 4058 1mwm_A) 0.1612 0.4362 7.2888 ( 1 7 10) 0 0.2882 0.7201 31 11
( 1656 1fxx_A) ( 4191 1nbw_A) 0.1290 0.2222 7.8209 ( 0 4 6) 0 0.2355 0.3878 31 18
( 1656 1fxx_A) ( 4193 1nbw_A) 0.2018 0.2525 6.6127 ( 5 13 21) 0 0.2258 0.4365 31 16
( 1656 1fxx_A) ( 4281 1nk4_A) 0.3258 0.4382 8.6282 ( 9 40 55) 0 0.3438 0.7696 31 12
( 1656 1fxx_A) ( 4391 1nu0_A) 0.2581 0.9961 5.6768 ( 0 17 28) 0 0.2581 0.9961 31 8
( 1656 1fxx_A) ( 4469 1o13_A) 0.2258 0.8741 4.6048 ( 0 13 21) 0 0.2258 0.8741 31 8
( 1656 1fxx_A) ( 4935 1p90_A) 0.2258 0.6996 4.9122 ( 0 12 21) 0 0.2580 0.7917 31 10
( 1656 1fxx_A) ( 5120 1pv9_A) 0.2580 0.6639 4.6169 ( 1 19 28) 0 0.2773 0.6644 31 12
( 1656 1fxx_A) ( 5243 1q8i_A) 0.1606 0.1775 5.3684 ( 2 9 10) 0 0.4494 0.4964 31 28
( 1656 1fxx_A) ( 5447 1qtm_A) 0.2580 0.8724 4.2801 ( 1 17 28) 0 0.2580 0.8724 31 9
( 1656 1fxx_A) ( 5500 1qz5_A) 0.2258 0.6362 4.2195 ( 0 12 21) 0 0.2459 0.6362 31 11
( 1656 1fxx_A) ( 5501 1qz5_A) 0.1612 0.2761 5.5940 ( 1 7 10) 0 0.2170 0.3229 31 18
( 1656 1fxx_A) ( 5883 1t7p_A) 0.3225 0.8210 4.8105 ( 2 34 45) 0 0.3537 0.8210 31 12
( 1656 1fxx_A) ( 5906 1tgo_A) 0.1654 0.1763 9.1586 ( 6 12 15) 0 0.3641 0.4028 31 27
( 1656 1fxx_A) ( 6064 1uoc_A) 0.4192 0.7608 3.2079 ( 3 61 78) 0 0.4510 0.8121 31 17
( 1656 1fxx_A) ( 6249 1vhx_A) 0.2903 0.8945 5.3143 ( 1 25 36) 0 0.2903 0.8945 31 10
( 1656 1fxx_A) ( 6299 1vk0_A) 0.3202 0.5976 4.3474 ( 4 31 45) 0 0.3202 0.5976 31 15
( 1656 1fxx_A) ( 6323 1vrt_A) 0.1935 0.7496 4.7148 ( 0 6 15) 0 0.1935 0.7496 31 8
-------------------------------------------------------------------------------------------------------------------------