------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 2491 1ih7_A) ( 247 1az9 ) 0.1481 0.2857 5.1109 ( 0 4 6) 0 0.4435 0.8339 27 14 ( 2491 1ih7_A) ( 345 1bco ) 0.2321 0.2964 4.7521 ( 3 9 21) 0 0.2575 0.5454 27 11 ( 2491 1ih7_A) ( 463 1bu6_O) 0.1831 0.2636 10.2351 ( 1 4 10) 0 0.3688 0.5439 27 18 ( 2491 1ih7_A) ( 464 1bu6_O) 0.1849 0.2916 13.2497 ( 1 7 10) 0 0.2954 0.4621 27 17 ( 2491 1ih7_A) ( 471 1bup_A) 0.2587 0.4301 4.6461 ( 2 17 21) 0 0.2943 0.4757 27 16 ( 2491 1ih7_A) ( 472 1bup_A) 0.2222 0.4999 5.0402 ( 0 7 15) 0 0.2588 0.5600 27 12 ( 2491 1ih7_A) ( 592 1chm_A) 0.1852 0.4166 4.7427 ( 0 6 10) 0 0.4071 0.9006 27 12 ( 2491 1ih7_A) ( 703 1cxq_A) 0.2321 0.2975 5.9334 ( 4 12 21) 0 0.2580 0.5998 27 10 ( 2491 1ih7_A) ( 713 1cza_N) 0.2962 0.7904 6.4014 ( 1 18 28) 0 0.2962 0.7904 27 10 ( 2491 1ih7_A) ( 714 1cza_N) 0.1481 0.2857 7.7720 ( 0 5 6) 0 0.2738 0.3631 27 14 ( 2491 1ih7_A) ( 934 1dt9_A) 0.2593 0.7761 6.2814 ( 0 14 21) 0 0.2593 0.7761 27 9 ( 2491 1ih7_A) ( 1021 1e3m_A) 0.3309 0.7337 4.9074 ( 2 16 36) 0 0.3309 0.8551 27 9 ( 2491 1ih7_A) ( 1033 1e4f_T) 0.1817 0.2972 7.9994 ( 2 7 10) 0 0.3021 0.4454 27 14 ( 2491 1ih7_A) ( 1034 1e4f_T) 0.2963 0.6148 6.4313 ( 0 18 28) 0 0.2963 0.6148 27 13 ( 2491 1ih7_A) ( 1191 1eke_A) 0.1481 0.2857 3.8288 ( 0 1 6) 0 0.2961 0.5672 27 14 ( 2491 1ih7_A) ( 1223 1eo1_A) 0.1852 0.6241 7.1543 ( 0 3 10) 0 0.2671 0.6241 27 8 ( 2491 1ih7_A) ( 1289 1ewq_A) 0.2963 0.7996 4.2359 ( 0 14 28) 0 0.3352 0.7996 27 10 ( 2491 1ih7_A) ( 1305 1exq_A) 0.1481 0.4443 7.2256 ( 0 2 6) 0 0.2810 0.5200 27 9 ( 2491 1ih7_A) ( 1522 1fjg_K) 0.2593 0.9978 4.9277 ( 0 10 21) 0 0.2593 0.9978 27 7 ( 2491 1ih7_A) ( 1656 1fxx_A) 0.4065 0.3544 4.6826 ( 3 40 55) 0 0.5166 0.4506 27 31 ( 2491 1ih7_A) ( 1778 1g99_A) 0.2783 0.3265 5.0011 ( 7 23 36) 0 0.2783 0.6362 27 11 ( 2491 1ih7_A) ( 1779 1g99_A) 0.2222 0.3750 5.2938 ( 0 10 15) 0 0.3315 0.5394 27 16 ( 2491 1ih7_A) ( 2218 1hjr_A) 0.2963 0.7988 5.5151 ( 0 18 28) 0 0.2963 0.7988 27 10 ( 2491 1ih7_A) ( 2296 1hux_A) 0.1852 0.2778 4.6664 ( 0 7 10) 0 0.3526 0.4613 27 18 ( 2491 1ih7_A) ( 2378 1i39_A) 0.2259 0.2750 11.0617 ( 5 14 21) 0 0.3247 0.5692 27 13 ( 2491 1ih7_A) ( 2483 1ig8_A) 0.1852 0.4545 5.5269 ( 0 3 10) 0 0.2954 0.6652 27 11 ( 2491 1ih7_A) ( 2484 1ig8_A) 0.1481 0.2667 6.9960 ( 0 3 6) 0 0.3332 0.5979 27 15 ( 2491 1ih7_A) ( 2491 1ih7_A) 1.0000 1.0000 0.0000 ( 0 316 351) 0 1.0000 1.0000 27 27 ( 2491 1ih7_A) ( 2619 1iv0_A) 0.1831 0.3907 5.2929 ( 1 4 10) 0 0.2081 0.5714 27 7 ( 2491 1ih7_A) ( 2733 1j54_A) 0.3704 0.8324 3.0773 ( 1 34 45) 0 0.4073 0.9089 27 12 ( 2491 1ih7_A) ( 2775 1j9a_A) 0.3690 0.6821 4.1605 ( 3 32 45) 0 0.4302 0.7336 27 14 ( 2491 1ih7_A) ( 2821 1jce_A) 0.2696 0.3527 6.6155 ( 5 18 28) 0 0.2696 0.5832 27 12 ( 2491 1ih7_A) ( 2822 1jce_A) 0.2593 0.4666 4.7595 ( 0 14 21) 0 0.3228 0.4802 27 15 ( 2491 1ih7_A) ( 2910 1jj2_M) 0.1481 0.3636 4.2360 ( 0 0 6) 0 0.2878 0.6314 27 11 ( 2491 1ih7_A) ( 2954 1jl1_A) 0.2294 0.2441 6.4018 ( 9 22 36) 0 0.2376 0.5040 27 10 ( 2491 1ih7_A) ( 3210 1k8k_A) 0.2321 0.2854 6.1307 ( 3 9 21) 0 0.2570 0.4108 27 16 ( 2491 1ih7_A) ( 3260 1kcf_A) 0.3328 0.7241 8.1741 ( 2 25 36) 0 0.3328 0.7241 27 12 ( 2491 1ih7_A) ( 3286 1kfs_A) 0.4046 0.8020 2.7564 ( 4 40 55) 0 0.4418 0.8852 27 12 ( 2491 1ih7_A) ( 3925 1mgt_A) 0.1481 0.6661 5.7400 ( 0 3 6) 0 0.1848 0.6661 27 6 ( 2491 1ih7_A) ( 4043 1mus_A) 0.1852 0.1852 7.0140 ( 0 5 10) 0 0.3348 0.3348 27 27 ( 2491 1ih7_A) ( 4057 1mwm_A) 0.2222 0.5454 4.8696 ( 0 13 15) 0 0.2592 0.6332 27 11 ( 2491 1ih7_A) ( 4058 1mwm_A) 0.1852 0.4545 3.2066 ( 0 4 10) 0 0.2963 0.7232 27 11 ( 2491 1ih7_A) ( 4191 1nbw_A) 0.1481 0.2222 3.3207 ( 0 3 6) 0 0.2235 0.2777 27 18 ( 2491 1ih7_A) ( 4193 1nbw_A) 0.2671 0.3316 6.4517 ( 4 14 28) 0 0.2671 0.4367 27 16 ( 2491 1ih7_A) ( 4281 1nk4_A) 0.3657 0.6739 3.7903 ( 4 31 45) 0 0.3657 0.6739 27 12 ( 2491 1ih7_A) ( 4391 1nu0_A) 0.1852 0.6223 9.3264 ( 0 4 10) 0 0.2507 0.6223 27 8 ( 2491 1ih7_A) ( 4469 1o13_A) 0.2593 0.8737 5.0548 ( 0 12 21) 0 0.2593 0.8737 27 8 ( 2491 1ih7_A) ( 4935 1p90_A) 0.1852 0.4998 6.7581 ( 0 4 10) 0 0.2598 0.4998 27 10 ( 2491 1ih7_A) ( 5120 1pv9_A) 0.1852 0.4166 5.4748 ( 0 7 10) 0 0.4394 0.9041 27 12 ( 2491 1ih7_A) ( 5243 1q8i_A) 0.8315 0.8043 3.5960 ( 14 212 253) 0 0.8315 0.8043 27 28 ( 2491 1ih7_A) ( 5447 1qtm_A) 0.2962 0.8778 4.3568 ( 1 19 28) 0 0.3323 0.8778 27 9 ( 2491 1ih7_A) ( 5500 1qz5_A) 0.1481 0.3636 4.6477 ( 0 2 6) 0 0.2222 0.5454 27 11 ( 2491 1ih7_A) ( 5501 1qz5_A) 0.2510 0.3405 6.5975 ( 4 17 21) 0 0.2962 0.4435 27 18 ( 2491 1ih7_A) ( 5883 1t7p_A) 0.4198 0.6027 6.5030 ( 8 50 66) 0 0.4198 0.8172 27 12 ( 2491 1ih7_A) ( 5906 1tgo_A) 0.7739 0.7739 4.2799 ( 16 189 231) 0 0.7739 0.7739 27 27 ( 2491 1ih7_A) ( 6064 1uoc_A) 0.2592 0.4117 6.9218 ( 0 14 21) 0 0.4442 0.7038 27 17 ( 2491 1ih7_A) ( 6249 1vhx_A) 0.3700 0.9568 7.1925 ( 2 32 45) 0 0.3700 0.9568 27 10 ( 2491 1ih7_A) ( 6299 1vk0_A) 0.1852 0.3333 5.9135 ( 0 8 10) 0 0.4323 0.6633 27 15 ( 2491 1ih7_A) ( 6323 1vrt_A) 0.2585 0.7003 5.0341 ( 1 8 21) 0 0.2585 0.7003 27 8 -------------------------------------------------------------------------------------------------------------------------