------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 2619 1iv0_A) ( 247 1az9 ) 0.9999 0.5000 2.4660 ( 0 11 21) 0 0.9999 0.5000 7 14 ( 2619 1iv0_A) ( 345 1bco ) 0.8570 0.5454 3.2209 ( 0 9 15) 0 0.8570 0.6126 7 11 ( 2619 1iv0_A) ( 463 1bu6_O) 0.8777 0.3874 3.5401 ( 1 11 21) 0 0.8777 0.3874 7 18 ( 2619 1iv0_A) ( 464 1bu6_O) 0.9049 0.4103 4.9218 ( 1 12 21) 0 0.9049 0.4103 7 17 ( 2619 1iv0_A) ( 471 1bup_A) 0.5710 0.2500 6.5861 ( 0 3 6) 0 0.7131 0.3501 7 16 ( 2619 1iv0_A) ( 472 1bup_A) 0.5708 0.3333 7.2866 ( 0 2 6) 0 0.5708 0.3333 7 12 ( 2619 1iv0_A) ( 592 1chm_A) 0.9061 0.5754 3.0676 ( 1 12 21) 0 0.9061 0.5754 7 12 ( 2619 1iv0_A) ( 703 1cxq_A) 0.9061 0.6810 3.0132 ( 1 12 21) 0 0.9061 0.6810 7 10 ( 2619 1iv0_A) ( 713 1cza_N) 0.8560 0.5998 5.0073 ( 0 9 15) 0 0.8560 0.5998 7 10 ( 2619 1iv0_A) ( 714 1cza_N) 0.5711 0.2857 6.3007 ( 0 3 6) 0 0.9895 0.4997 7 14 ( 2619 1iv0_A) ( 934 1dt9_A) 0.9049 0.7463 4.9519 ( 1 12 21) 0 0.9049 0.7463 7 9 ( 2619 1iv0_A) ( 1021 1e3m_A) 0.9996 0.7777 3.1757 ( 0 7 21) 0 0.9996 0.7777 7 9 ( 2619 1iv0_A) ( 1033 1e4f_T) 0.8560 0.4285 5.0563 ( 0 9 15) 0 0.8560 0.4718 7 14 ( 2619 1iv0_A) ( 1034 1e4f_T) 0.9262 0.5345 4.9341 ( 1 13 21) 0 0.9262 0.5345 7 13 ( 2619 1iv0_A) ( 1191 1eke_A) 0.8775 0.4948 3.9647 ( 1 11 21) 0 0.8775 0.4948 7 14 ( 2619 1iv0_A) ( 1223 1eo1_A) 0.9994 0.8747 3.5040 ( 0 11 21) 0 0.9994 0.8747 7 8 ( 2619 1iv0_A) ( 1289 1ewq_A) 0.9978 0.6996 4.9325 ( 0 12 21) 0 0.9978 0.6996 7 10 ( 2619 1iv0_A) ( 1305 1exq_A) 0.6946 0.6041 3.6804 ( 1 8 15) 0 0.7375 0.6241 7 9 ( 2619 1iv0_A) ( 1522 1fjg_K) 0.9995 0.9995 3.3988 ( 0 11 21) 0 0.9995 0.9995 7 7 ( 2619 1iv0_A) ( 1656 1fxx_A) 0.8570 0.1935 2.8448 ( 0 7 15) 0 0.8570 0.2247 7 31 ( 2619 1iv0_A) ( 1778 1g99_A) 0.7139 0.4545 4.7277 ( 0 4 10) 0 0.9052 0.6242 7 11 ( 2619 1iv0_A) ( 1779 1g99_A) 0.9047 0.4355 5.1453 ( 1 12 21) 0 0.9047 0.4355 7 16 ( 2619 1iv0_A) ( 2218 1hjr_A) 0.9049 0.6807 4.9602 ( 1 12 21) 0 0.9049 0.6807 7 10 ( 2619 1iv0_A) ( 2296 1hux_A) 0.8568 0.3333 3.7720 ( 0 8 15) 0 0.8568 0.3333 7 18 ( 2619 1iv0_A) ( 2378 1i39_A) 0.9057 0.5331 3.9276 ( 1 12 21) 0 0.9057 0.5331 7 13 ( 2619 1iv0_A) ( 2483 1ig8_A) 0.9052 0.6242 4.6645 ( 1 12 21) 0 0.9052 0.6242 7 11 ( 2619 1iv0_A) ( 2484 1ig8_A) 0.7365 0.3961 6.1681 ( 1 9 15) 0 0.7365 0.4387 7 15 ( 2619 1iv0_A) ( 2491 1ih7_A) 0.5714 0.1481 3.8731 ( 0 3 6) 0 0.5714 0.2081 7 27 ( 2619 1iv0_A) ( 2619 1iv0_A) 1.0000 1.0000 0.0000 ( 0 14 21) 0 1.0000 1.0000 7 7 ( 2619 1iv0_A) ( 2733 1j54_A) 0.8570 0.5000 2.9939 ( 0 7 15) 0 0.8570 0.5000 7 12 ( 2619 1iv0_A) ( 2775 1j9a_A) 0.5713 0.2857 4.9263 ( 0 4 6) 0 0.5713 0.2857 7 14 ( 2619 1iv0_A) ( 2821 1jce_A) 0.6238 0.5148 3.6282 ( 2 13 21) 0 0.6238 0.5148 7 12 ( 2619 1iv0_A) ( 2822 1jce_A) 0.9267 0.4647 4.3776 ( 1 13 21) 0 0.9267 0.4647 7 15 ( 2619 1iv0_A) ( 2910 1jj2_M) 0.8568 0.5454 3.8150 ( 0 8 15) 0 0.8568 0.5454 7 11 ( 2619 1iv0_A) ( 2954 1jl1_A) 0.9974 0.6996 5.1408 ( 0 11 21) 0 0.9974 0.6996 7 10 ( 2619 1iv0_A) ( 3210 1k8k_A) 0.2941 0.2264 15.6684 ( 1 3 6) 0 0.2941 0.2294 7 16 ( 2619 1iv0_A) ( 3260 1kcf_A) 0.9986 0.5832 4.3483 ( 0 10 21) 0 0.9986 0.5832 7 12 ( 2619 1iv0_A) ( 3286 1kfs_A) 0.7142 0.4167 3.2584 ( 0 5 10) 0 0.7142 0.4167 7 12 ( 2619 1iv0_A) ( 3925 1mgt_A) 0.2477 0.2487 10.4800 ( 2 5 6) 1 0.2477 0.2487 7 6 ( 2619 1iv0_A) ( 4043 1mus_A) 0.9977 0.2593 4.9479 ( 0 9 21) 0 0.9977 0.2593 7 27 ( 2619 1iv0_A) ( 4057 1mwm_A) 0.8569 0.5454 3.5152 ( 0 9 15) 0 0.9977 0.6361 7 11 ( 2619 1iv0_A) ( 4058 1mwm_A) 0.7127 0.4544 6.9105 ( 0 4 10) 0 0.7127 0.4544 7 11 ( 2619 1iv0_A) ( 4191 1nbw_A) 0.9995 0.3889 3.3024 ( 0 11 21) 0 0.9995 0.3889 7 18 ( 2619 1iv0_A) ( 4193 1nbw_A) 0.9970 0.4375 5.3054 ( 0 12 21) 0 0.9970 0.4375 7 16 ( 2619 1iv0_A) ( 4281 1nk4_A) 0.7143 0.4167 2.5816 ( 0 5 10) 0 0.7143 0.4167 7 12 ( 2619 1iv0_A) ( 4391 1nu0_A) 0.9980 0.8740 4.7705 ( 0 11 21) 0 0.9980 0.8740 7 8 ( 2619 1iv0_A) ( 4469 1o13_A) 0.9993 0.8746 3.6749 ( 0 13 21) 0 0.9993 0.8746 7 8 ( 2619 1iv0_A) ( 4935 1p90_A) 0.9269 0.6858 4.1826 ( 1 13 21) 0 0.9269 0.6858 7 10 ( 2619 1iv0_A) ( 5120 1pv9_A) 0.9062 0.5754 2.7831 ( 1 12 21) 0 0.9062 0.5754 7 12 ( 2619 1iv0_A) ( 5243 1q8i_A) 0.8570 0.2143 2.8558 ( 0 7 15) 0 0.8570 0.2143 7 28 ( 2619 1iv0_A) ( 5447 1qtm_A) 0.5713 0.4444 4.4246 ( 0 1 6) 0 0.5713 0.4444 7 9 ( 2619 1iv0_A) ( 5500 1qz5_A) 0.9996 0.6363 3.2811 ( 0 10 21) 0 0.9996 0.6363 7 11 ( 2619 1iv0_A) ( 5501 1qz5_A) 0.1993 0.1763 7.9857 ( 1 2 6) 0 0.2491 0.2204 7 18 ( 2619 1iv0_A) ( 5883 1t7p_A) 0.5692 0.3332 9.9651 ( 0 3 6) 0 0.5692 0.3671 7 12 ( 2619 1iv0_A) ( 5906 1tgo_A) 0.8570 0.2222 3.0202 ( 0 8 15) 0 0.8570 0.2222 7 27 ( 2619 1iv0_A) ( 6064 1uoc_A) 0.5818 0.3916 4.9370 ( 2 12 21) 0 0.5818 0.3916 7 17 ( 2619 1iv0_A) ( 6249 1vhx_A) 0.9989 0.6998 4.1167 ( 0 11 21) 0 0.9989 0.6998 7 10 ( 2619 1iv0_A) ( 6299 1vk0_A) 0.7141 0.3333 4.0571 ( 0 5 10) 0 0.7141 0.4316 7 15 ( 2619 1iv0_A) ( 6323 1vrt_A) 0.9989 0.8744 4.1304 ( 0 11 21) 0 0.9989 0.8744 7 8 -------------------------------------------------------------------------------------------------------------------------