------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 3925 1mgt_A) ( 247 1az9 ) 0.6649 0.2857 7.7677 ( 0 2 6) 0 0.6649 0.2857 6 14 ( 3925 1mgt_A) ( 345 1bco ) 0.9975 0.5453 5.0624 ( 0 8 15) 0 0.9975 0.5453 6 11 ( 3925 1mgt_A) ( 463 1bu6_O) 0.6662 0.2222 5.4411 ( 0 1 6) 0 0.6662 0.2222 6 18 ( 3925 1mgt_A) ( 464 1bu6_O) nil ( 3925 1mgt_A) ( 471 1bup_A) 0.3877 0.2412 10.0484 ( 1 4 6) 0 0.4661 0.2753 6 16 ( 3925 1mgt_A) ( 472 1bup_A) nil ( 3925 1mgt_A) ( 592 1chm_A) nil ( 3925 1mgt_A) ( 703 1cxq_A) 0.9959 0.5997 5.7471 ( 0 8 15) 0 0.9959 0.5997 6 10 ( 3925 1mgt_A) ( 713 1cza_N) 0.6649 0.3999 7.7095 ( 0 3 6) 0 0.6649 0.3999 6 10 ( 3925 1mgt_A) ( 714 1cza_N) 0.6559 0.2856 12.2096 ( 0 3 6) 1 0.6658 0.2857 6 14 ( 3925 1mgt_A) ( 934 1dt9_A) 0.6552 0.4429 12.4244 ( 0 2 6) 0 0.6552 0.4429 6 9 ( 3925 1mgt_A) ( 1021 1e3m_A) 0.6662 0.4444 5.6311 ( 0 0 6) 0 0.6662 0.4444 6 9 ( 3925 1mgt_A) ( 1033 1e4f_T) 0.6656 0.2857 6.8257 ( 0 3 6) 0 0.6659 0.2857 6 14 ( 3925 1mgt_A) ( 1034 1e4f_T) nil ( 3925 1mgt_A) ( 1191 1eke_A) 0.4665 0.2785 7.9239 ( 1 5 6) 0 0.4665 0.2785 6 14 ( 3925 1mgt_A) ( 1223 1eo1_A) 0.2970 0.2910 6.2591 ( 1 3 6) 0 0.2970 0.2910 6 8 ( 3925 1mgt_A) ( 1289 1ewq_A) 0.8295 0.4997 7.0763 ( 0 2 10) 0 0.8295 0.4997 6 10 ( 3925 1mgt_A) ( 1305 1exq_A) 0.9982 0.6664 4.6624 ( 0 8 15) 0 0.9982 0.6664 6 9 ( 3925 1mgt_A) ( 1522 1fjg_K) 0.2970 0.2945 8.7169 ( 1 3 6) 0 0.2970 0.2945 6 7 ( 3925 1mgt_A) ( 1656 1fxx_A) 0.2970 0.1280 8.1423 ( 1 3 6) 0 0.2970 0.1280 6 31 ( 3925 1mgt_A) ( 1778 1g99_A) 0.6659 0.3636 6.3242 ( 0 2 6) 0 0.6659 0.3636 6 11 ( 3925 1mgt_A) ( 1779 1g99_A) 0.6648 0.2500 7.7916 ( 0 2 6) 0 0.6648 0.2500 6 16 ( 3925 1mgt_A) ( 2218 1hjr_A) 0.1996 0.1970 13.6031 ( 2 4 6) 1 0.1996 0.1970 6 10 ( 3925 1mgt_A) ( 2296 1hux_A) 0.6664 0.2222 4.6766 ( 0 2 6) 0 0.6664 0.2222 6 18 ( 3925 1mgt_A) ( 2378 1i39_A) 0.6631 0.3076 9.1902 ( 0 6 6) 0 0.6631 0.3076 6 13 ( 3925 1mgt_A) ( 2483 1ig8_A) 0.6652 0.3636 7.3719 ( 0 2 6) 0 0.6656 0.3636 6 11 ( 3925 1mgt_A) ( 2484 1ig8_A) 0.3878 0.2549 8.6382 ( 1 4 6) 0 0.6664 0.2667 6 15 ( 3925 1mgt_A) ( 2491 1ih7_A) 0.6661 0.1481 5.7400 ( 0 3 6) 0 0.6661 0.1848 6 27 ( 3925 1mgt_A) ( 2619 1iv0_A) 0.2487 0.2477 10.4800 ( 2 5 6) 1 0.2487 0.2477 6 7 ( 3925 1mgt_A) ( 2733 1j54_A) 0.6633 0.3332 9.0495 ( 0 3 6) 0 0.6633 0.3332 6 12 ( 3925 1mgt_A) ( 2775 1j9a_A) 0.1996 0.1895 7.7779 ( 2 4 6) 0 0.6619 0.2856 6 14 ( 3925 1mgt_A) ( 2821 1jce_A) 0.6661 0.3333 5.6907 ( 0 4 6) 0 0.8305 0.4166 6 12 ( 3925 1mgt_A) ( 2822 1jce_A) 0.6610 0.2666 10.3660 ( 0 2 6) 0 0.6610 0.2666 6 15 ( 3925 1mgt_A) ( 2910 1jj2_M) 0.6665 0.3636 4.1895 ( 0 3 6) 0 0.8305 0.4544 6 11 ( 3925 1mgt_A) ( 2954 1jl1_A) 0.8316 0.4999 5.7869 ( 0 5 10) 0 0.8316 0.4999 6 10 ( 3925 1mgt_A) ( 3210 1k8k_A) 0.6588 0.2499 11.2840 ( 0 3 6) 0 0.6588 0.2499 6 16 ( 3925 1mgt_A) ( 3260 1kcf_A) 0.3947 0.3429 8.2003 ( 1 4 10) 0 0.3947 0.3429 6 12 ( 3925 1mgt_A) ( 3286 1kfs_A) 0.0999 0.0998 6.3493 ( 2 2 6) 0 0.0999 0.0998 6 12 ( 3925 1mgt_A) ( 3925 1mgt_A) 1.0000 1.0000 0.0000 ( 0 10 15) 0 1.0000 1.0000 6 6 ( 3925 1mgt_A) ( 4043 1mus_A) 0.6660 0.1481 5.9547 ( 0 3 6) 0 0.6660 0.1481 6 27 ( 3925 1mgt_A) ( 4057 1mwm_A) nil ( 3925 1mgt_A) ( 4058 1mwm_A) 0.6616 0.3634 10.0768 ( 0 3 6) 0 0.6616 0.3986 6 11 ( 3925 1mgt_A) ( 4191 1nbw_A) 0.6662 0.2222 5.6035 ( 0 2 6) 0 0.6662 0.2222 6 18 ( 3925 1mgt_A) ( 4193 1nbw_A) 0.1996 0.1835 9.8088 ( 1 2 6) 0 0.1996 0.1835 6 16 ( 3925 1mgt_A) ( 4281 1nk4_A) 0.1333 0.1325 8.9150 ( 3 4 6) 0 0.1500 0.1497 6 12 ( 3925 1mgt_A) ( 4391 1nu0_A) nil ( 3925 1mgt_A) ( 4469 1o13_A) 0.8286 0.6239 7.4747 ( 0 6 10) 0 0.8286 0.6239 6 8 ( 3925 1mgt_A) ( 4935 1p90_A) 0.1499 0.1493 8.4370 ( 2 3 6) 0 0.1499 0.1493 6 10 ( 3925 1mgt_A) ( 5120 1pv9_A) 0.6658 0.3333 6.4990 ( 0 1 6) 0 0.6658 0.3333 6 12 ( 3925 1mgt_A) ( 5243 1q8i_A) 0.6664 0.1429 4.5779 ( 0 0 6) 0 0.8318 0.1786 6 28 ( 3925 1mgt_A) ( 5447 1qtm_A) 0.6662 0.4444 5.4564 ( 0 3 6) 0 0.6662 0.4444 6 9 ( 3925 1mgt_A) ( 5500 1qz5_A) 0.6659 0.3636 6.1829 ( 0 3 6) 0 0.6659 0.3636 6 11 ( 3925 1mgt_A) ( 5501 1qz5_A) 0.6595 0.2222 10.9933 ( 0 2 6) 0 0.6595 0.2222 6 18 ( 3925 1mgt_A) ( 5883 1t7p_A) 0.0999 0.0998 5.1300 ( 2 2 6) 0 0.0999 0.0998 6 12 ( 3925 1mgt_A) ( 5906 1tgo_A) 0.6664 0.1481 4.9216 ( 0 2 6) 0 0.6664 0.1614 6 27 ( 3925 1mgt_A) ( 6064 1uoc_A) 0.6659 0.2353 6.2496 ( 0 3 6) 0 0.6659 0.2353 6 17 ( 3925 1mgt_A) ( 6249 1vhx_A) 0.1665 0.1654 10.3778 ( 3 5 6) 0 0.2487 0.2412 6 10 ( 3925 1mgt_A) ( 6299 1vk0_A) 0.2970 0.2362 8.6819 ( 1 3 6) 0 0.2970 0.2362 6 15 ( 3925 1mgt_A) ( 6323 1vrt_A) 0.1996 0.1987 8.8441 ( 1 2 6) 1 0.1996 0.1987 6 8 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