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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:
HELIX min length: 5 STRAND min length: 3
shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100
anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12
Legend:
( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2
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( 464 1bu6_O) ( 247 1az9 ) 0.5286 0.6408 7.5310 ( 1 25 36) 0 0.5286 0.6408 17 14
( 464 1bu6_O) ( 345 1bco ) 0.4117 0.6358 6.2150 ( 0 11 21) 0 0.4117 0.6358 17 11
( 464 1bu6_O) ( 463 1bu6_O) 0.2940 0.2777 9.6207 ( 0 6 10) 0 0.3033 0.3024 17 18
( 464 1bu6_O) ( 464 1bu6_O) 1.0000 1.0000 0.0000 ( 0 118 136) 0 1.0000 1.0000 17 17
( 464 1bu6_O) ( 471 1bup_A) 0.3529 0.3750 6.3294 ( 0 13 15) 0 0.4851 0.4980 17 16
( 464 1bu6_O) ( 472 1bup_A) 0.4694 0.6600 5.1260 ( 1 15 28) 0 0.4694 0.6600 17 12
( 464 1bu6_O) ( 592 1chm_A) 0.4179 0.4407 7.7225 ( 8 36 45) 0 0.4596 0.6130 17 12
( 464 1bu6_O) ( 703 1cxq_A) 0.3528 0.5984 8.5728 ( 0 11 15) 0 0.3528 0.5984 17 10
( 464 1bu6_O) ( 713 1cza_N) 0.4637 0.7223 4.0621 ( 2 19 28) 0 0.4637 0.7223 17 10
( 464 1bu6_O) ( 714 1cza_N) 0.4130 0.4277 6.8272 ( 7 31 45) 0 0.4130 0.4277 17 14
( 464 1bu6_O) ( 934 1dt9_A) 0.2941 0.5553 6.1012 ( 0 5 10) 0 0.4155 0.5553 17 9
( 464 1bu6_O) ( 1021 1e3m_A) 0.2353 0.4441 8.3780 ( 0 1 6) 0 0.5173 0.8175 17 9
( 464 1bu6_O) ( 1033 1e4f_T) 0.4702 0.5703 5.0921 ( 1 20 28) 0 0.4702 0.5703 17 14
( 464 1bu6_O) ( 1034 1e4f_T) 0.5737 0.7192 4.0905 ( 3 31 45) 0 0.5737 0.7192 17 13
( 464 1bu6_O) ( 1191 1eke_A) 0.2353 0.2857 6.2321 ( 0 2 6) 0 0.3048 0.3293 17 14
( 464 1bu6_O) ( 1223 1eo1_A) 0.2353 0.4998 6.2043 ( 0 5 6) 0 0.4706 0.9990 17 8
( 464 1bu6_O) ( 1289 1ewq_A) 0.2928 0.4824 6.3197 ( 1 8 10) 0 0.4705 0.7995 17 10
( 464 1bu6_O) ( 1305 1exq_A) 0.2353 0.4441 8.5088 ( 0 2 6) 0 0.3339 0.4665 17 9
( 464 1bu6_O) ( 1522 1fjg_K) 0.4117 0.9968 5.3772 ( 0 11 21) 0 0.4117 0.9968 17 7
( 464 1bu6_O) ( 1656 1fxx_A) 0.2353 0.1290 6.1664 ( 0 4 6) 0 0.5851 0.3224 17 31
( 464 1bu6_O) ( 1778 1g99_A) 0.2941 0.4544 6.1031 ( 0 8 10) 0 0.3456 0.4929 17 11
( 464 1bu6_O) ( 1779 1g99_A) 0.6230 0.6557 6.5256 ( 4 41 55) 0 0.6230 0.6557 17 16
( 464 1bu6_O) ( 2218 1hjr_A) 0.3529 0.5999 4.4722 ( 0 8 15) 0 0.5267 0.8642 17 10
( 464 1bu6_O) ( 2296 1hux_A) 0.5780 0.5478 3.1325 ( 3 34 45) 0 0.5780 0.5478 17 18
( 464 1bu6_O) ( 2378 1i39_A) 0.2941 0.3845 7.5235 ( 0 6 10) 0 0.4339 0.5098 17 13
( 464 1bu6_O) ( 2483 1ig8_A) 0.4699 0.7211 3.8183 ( 1 17 28) 0 0.4699 0.7211 17 11
( 464 1bu6_O) ( 2484 1ig8_A) 0.4500 0.4667 6.2836 ( 6 30 45) 0 0.5551 0.6095 17 15
( 464 1bu6_O) ( 2491 1ih7_A) 0.2916 0.1849 13.2497 ( 1 7 10) 0 0.4621 0.2954 17 27
( 464 1bu6_O) ( 2619 1iv0_A) 0.4103 0.9049 4.9218 ( 1 12 21) 0 0.4103 0.9049 17 7
( 464 1bu6_O) ( 2733 1j54_A) 0.2941 0.4165 7.8897 ( 0 7 10) 0 0.4770 0.6658 17 12
( 464 1bu6_O) ( 2775 1j9a_A) 0.4491 0.5209 6.8934 ( 3 21 28) 0 0.4491 0.5209 17 14
( 464 1bu6_O) ( 2821 1jce_A) 0.5124 0.6707 5.0059 ( 3 26 36) 0 0.6210 0.8003 17 12
( 464 1bu6_O) ( 2822 1jce_A) 0.5475 0.5976 4.0298 ( 4 31 45) 0 0.5475 0.5976 17 15
( 464 1bu6_O) ( 2910 1jj2_M) 0.2353 0.3636 6.8822 ( 0 4 6) 0 0.3657 0.4377 17 11
( 464 1bu6_O) ( 2954 1jl1_A) 0.2353 0.3998 8.2476 ( 0 4 6) 0 0.4266 0.5345 17 10
( 464 1bu6_O) ( 3210 1k8k_A) 0.4538 0.4777 7.1050 ( 2 15 28) 0 0.4538 0.4777 17 16
( 464 1bu6_O) ( 3260 1kcf_A) 0.2353 0.3333 8.2087 ( 0 2 6) 0 0.5287 0.7462 17 12
( 464 1bu6_O) ( 3286 1kfs_A) 0.2352 0.3329 12.6720 ( 0 6 6) 0 0.3727 0.3922 17 12
( 464 1bu6_O) ( 3925 1mgt_A) nil
( 464 1bu6_O) ( 4043 1mus_A) 0.2353 0.1481 7.3115 ( 0 4 6) 0 0.4336 0.2966 17 27
( 464 1bu6_O) ( 4057 1mwm_A) 0.5266 0.7952 5.0034 ( 2 28 36) 0 0.5859 0.8897 17 11
( 464 1bu6_O) ( 4058 1mwm_A) 0.5752 0.8165 5.4346 ( 3 32 45) 0 0.5752 0.8165 17 11
( 464 1bu6_O) ( 4191 1nbw_A) 0.4621 0.4380 4.7323 ( 2 18 28) 0 0.4621 0.4380 17 18
( 464 1bu6_O) ( 4193 1nbw_A) 0.5428 0.5663 4.8098 ( 4 30 45) 0 0.5428 0.5663 17 16
( 464 1bu6_O) ( 4281 1nk4_A) 0.2353 0.3332 9.0790 ( 0 5 6) 0 0.3048 0.3333 17 12
( 464 1bu6_O) ( 4391 1nu0_A) 0.4117 0.8714 6.5470 ( 0 13 21) 0 0.4704 0.9930 17 8
( 464 1bu6_O) ( 4469 1o13_A) 0.2353 0.4998 6.3964 ( 0 5 6) 0 0.4703 0.9864 17 8
( 464 1bu6_O) ( 4935 1p90_A) 0.3657 0.4460 6.6119 ( 3 14 21) 0 0.4705 0.7995 17 10
( 464 1bu6_O) ( 5120 1pv9_A) 0.4235 0.4642 7.3425 ( 6 29 36) 0 0.4235 0.5832 17 12
( 464 1bu6_O) ( 5243 1q8i_A) 0.2927 0.1785 9.7279 ( 1 8 10) 0 0.5680 0.3645 17 28
( 464 1bu6_O) ( 5447 1qtm_A) 0.2353 0.4443 6.2820 ( 0 1 6) 0 0.2820 0.4443 17 9
( 464 1bu6_O) ( 5500 1qz5_A) 0.5221 0.7624 7.4060 ( 2 22 36) 0 0.5221 0.7624 17 11
( 464 1bu6_O) ( 5501 1qz5_A) 0.4491 0.4279 6.3377 ( 2 14 28) 0 0.4704 0.4443 17 18
( 464 1bu6_O) ( 5883 1t7p_A) 0.2353 0.3333 7.9537 ( 0 3 6) 0 0.2353 0.3333 17 12
( 464 1bu6_O) ( 5906 1tgo_A) 0.2353 0.1481 6.4681 ( 0 4 6) 0 0.3845 0.2774 17 27
( 464 1bu6_O) ( 6064 1uoc_A) 0.2928 0.2928 6.6411 ( 1 8 10) 0 0.5284 0.5284 17 17
( 464 1bu6_O) ( 6249 1vhx_A) 0.2353 0.3998 7.8771 ( 0 4 6) 0 0.4769 0.7980 17 10
( 464 1bu6_O) ( 6299 1vk0_A) 0.2353 0.2667 7.3910 ( 0 4 6) 0 0.4486 0.4950 17 15
( 464 1bu6_O) ( 6323 1vrt_A) 0.2353 0.4995 7.9701 ( 0 1 6) 0 0.2887 0.4995 17 8
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