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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:
HELIX min length: 5 STRAND min length: 3
shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100
anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12
Legend:
( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2
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( 592 1chm_A) ( 247 1az9 ) 0.9996 0.8570 3.1969 ( 0 50 66) 0 0.9996 0.8570 12 14
( 592 1chm_A) ( 345 1bco ) 0.4166 0.4545 4.5985 ( 0 6 10) 0 0.6664 0.7269 12 11
( 592 1chm_A) ( 463 1bu6_O) 0.4821 0.3308 8.2447 ( 1 8 15) 0 0.5147 0.3773 12 18
( 592 1chm_A) ( 464 1bu6_O) 0.4504 0.4145 7.6652 ( 6 28 36) 0 0.6130 0.4596 12 17
( 592 1chm_A) ( 471 1bup_A) 0.4165 0.3125 8.1042 ( 0 7 10) 0 0.4531 0.3619 12 16
( 592 1chm_A) ( 472 1bup_A) 0.5754 0.5754 4.5262 ( 1 12 21) 0 0.5754 0.5754 12 12
( 592 1chm_A) ( 592 1chm_A) 1.0000 1.0000 0.0000 ( 0 55 66) 0 1.0000 1.0000 12 12
( 592 1chm_A) ( 703 1cxq_A) 0.5826 0.6983 7.2051 ( 0 15 21) 0 0.5826 0.6983 12 10
( 592 1chm_A) ( 713 1cza_N) 0.6311 0.7218 5.6372 ( 2 19 28) 0 0.6311 0.7218 12 10
( 592 1chm_A) ( 714 1cza_N) 0.5471 0.4820 8.7079 ( 2 16 21) 0 0.5471 0.4820 12 14
( 592 1chm_A) ( 934 1dt9_A) 0.4167 0.5555 4.0152 ( 0 6 10) 0 0.6661 0.8865 12 9
( 592 1chm_A) ( 1021 1e3m_A) 0.3333 0.4444 5.2087 ( 0 1 6) 0 0.6997 0.8398 12 9
( 592 1chm_A) ( 1033 1e4f_T) 0.6642 0.5703 5.4214 ( 1 20 28) 0 0.6642 0.5703 12 14
( 592 1chm_A) ( 1034 1e4f_T) 0.6643 0.6138 5.0233 ( 1 20 28) 0 0.6643 0.6138 12 13
( 592 1chm_A) ( 1191 1eke_A) 0.3333 0.2857 5.4211 ( 0 3 6) 0 0.4839 0.4589 12 14
( 592 1chm_A) ( 1223 1eo1_A) 0.5833 0.8745 3.9029 ( 0 11 21) 0 0.6665 0.9985 12 8
( 592 1chm_A) ( 1289 1ewq_A) 0.5833 0.6999 3.1740 ( 0 12 21) 0 0.5833 0.6999 12 10
( 592 1chm_A) ( 1305 1exq_A) 0.4167 0.5555 4.2041 ( 0 5 10) 0 0.5100 0.6659 12 9
( 592 1chm_A) ( 1522 1fjg_K) 0.5833 0.9995 3.3675 ( 0 11 21) 0 0.5833 0.9995 12 7
( 592 1chm_A) ( 1656 1fxx_A) 0.6644 0.2580 4.6319 ( 1 20 28) 0 0.6792 0.3146 12 31
( 592 1chm_A) ( 1778 1g99_A) 0.4167 0.4545 3.7259 ( 0 2 10) 0 0.4167 0.4545 12 11
( 592 1chm_A) ( 1779 1g99_A) 0.7486 0.5622 6.2684 ( 0 27 36) 0 0.7486 0.5622 12 16
( 592 1chm_A) ( 2218 1hjr_A) 0.4993 0.5982 8.8236 ( 0 9 15) 0 0.8311 0.9945 12 10
( 592 1chm_A) ( 2296 1hux_A) 0.6662 0.4444 5.6463 ( 0 20 28) 0 0.6662 0.4444 12 18
( 592 1chm_A) ( 2378 1i39_A) 0.4164 0.3844 8.7135 ( 0 7 10) 0 0.4164 0.3844 12 13
( 592 1chm_A) ( 2483 1ig8_A) 0.3333 0.3636 7.6079 ( 0 5 6) 0 0.6039 0.6381 12 11
( 592 1chm_A) ( 2484 1ig8_A) 0.3333 0.2667 7.0217 ( 0 6 6) 0 0.3333 0.2667 12 15
( 592 1chm_A) ( 2491 1ih7_A) 0.4166 0.1852 4.7427 ( 0 6 10) 0 0.9006 0.4071 12 27
( 592 1chm_A) ( 2619 1iv0_A) 0.5754 0.9061 3.0676 ( 1 12 21) 0 0.5754 0.9061 12 7
( 592 1chm_A) ( 2733 1j54_A) 0.4999 0.4999 4.7360 ( 0 11 15) 0 0.7475 0.7475 12 12
( 592 1chm_A) ( 2775 1j9a_A) 0.4204 0.3847 6.2344 ( 2 10 15) 0 0.5830 0.4998 12 14
( 592 1chm_A) ( 2821 1jce_A) 0.6635 0.6635 3.4880 ( 1 18 28) 0 0.6635 0.6635 12 12
( 592 1chm_A) ( 2822 1jce_A) 0.3333 0.2667 6.4207 ( 0 4 6) 0 0.3775 0.3363 12 15
( 592 1chm_A) ( 2910 1jj2_M) 0.5831 0.6360 5.3343 ( 0 12 21) 0 0.5831 0.6360 12 11
( 592 1chm_A) ( 2954 1jl1_A) 0.5831 0.6993 5.7005 ( 0 8 21) 0 0.5831 0.6993 12 10
( 592 1chm_A) ( 3210 1k8k_A) 0.3333 0.2500 8.4091 ( 0 1 6) 0 0.3333 0.2500 12 16
( 592 1chm_A) ( 3260 1kcf_A) 0.3333 0.3333 7.4890 ( 0 2 6) 0 0.8302 0.8302 12 12
( 592 1chm_A) ( 3286 1kfs_A) 0.6312 0.6312 4.8233 ( 2 19 28) 0 0.6312 0.6312 12 12
( 592 1chm_A) ( 3925 1mgt_A) nil
( 592 1chm_A) ( 4043 1mus_A) 0.6618 0.2962 6.6361 ( 1 17 28) 0 0.7460 0.3333 12 27
( 592 1chm_A) ( 4057 1mwm_A) 0.5832 0.6362 4.7077 ( 0 13 21) 0 0.5832 0.6362 12 11
( 592 1chm_A) ( 4058 1mwm_A) 0.6658 0.7260 6.4237 ( 0 19 28) 0 0.6658 0.7260 12 11
( 592 1chm_A) ( 4191 1nbw_A) 0.4166 0.2778 6.1279 ( 0 0 10) 0 0.6634 0.4440 12 18
( 592 1chm_A) ( 4193 1nbw_A) 0.3332 0.2500 9.8633 ( 0 3 6) 0 0.3333 0.2910 12 16
( 592 1chm_A) ( 4281 1nk4_A) 0.5754 0.5754 4.1213 ( 1 12 21) 0 0.5754 0.5754 12 12
( 592 1chm_A) ( 4391 1nu0_A) 0.5832 0.8739 4.8904 ( 0 13 21) 0 0.6662 0.9966 12 8
( 592 1chm_A) ( 4469 1o13_A) 0.4993 0.7447 8.7706 ( 0 9 15) 0 0.6644 0.9833 12 8
( 592 1chm_A) ( 4935 1p90_A) 0.4999 0.5998 4.9455 ( 0 9 15) 0 0.6664 0.7993 12 10
( 592 1chm_A) ( 5120 1pv9_A) 0.9992 0.9992 3.3982 ( 1 53 66) 0 0.9992 0.9992 12 12
( 592 1chm_A) ( 5243 1q8i_A) 0.4999 0.2143 5.2021 ( 0 10 15) 0 0.8156 0.3569 12 28
( 592 1chm_A) ( 5447 1qtm_A) 0.3333 0.4444 5.9234 ( 0 3 6) 0 0.4998 0.6659 12 9
( 592 1chm_A) ( 5500 1qz5_A) 0.7191 0.7723 4.7864 ( 2 23 36) 0 0.7191 0.7723 12 11
( 592 1chm_A) ( 5501 1qz5_A) 0.3333 0.2222 7.7786 ( 0 0 6) 0 0.3333 0.2286 12 18
( 592 1chm_A) ( 5883 1t7p_A) 0.4164 0.4164 8.8561 ( 0 5 10) 0 0.5804 0.5804 12 12
( 592 1chm_A) ( 5906 1tgo_A) 0.3775 0.1843 7.1789 ( 1 5 10) 0 0.7482 0.3333 12 27
( 592 1chm_A) ( 6064 1uoc_A) 0.4161 0.2940 10.6357 ( 0 8 10) 0 0.8200 0.5858 12 17
( 592 1chm_A) ( 6249 1vhx_A) 0.6663 0.7990 5.2811 ( 0 19 28) 0 0.7488 0.8971 12 10
( 592 1chm_A) ( 6299 1vk0_A) 0.4163 0.3332 9.1747 ( 0 8 10) 0 0.7447 0.5982 12 15
( 592 1chm_A) ( 6323 1vrt_A) 0.3949 0.5126 10.8821 ( 1 6 10) 0 0.4972 0.6249 12 8
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