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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:
HELIX min length: 5 STRAND min length: 3
shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100
anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12
Legend:
( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2
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( 6064 1uoc_A) ( 247 1az9 ) 0.2497 0.2712 7.6161 ( 2 6 10) 0 0.3521 0.4263 17 14
( 6064 1uoc_A) ( 345 1bco ) 0.2941 0.4541 8.7221 ( 0 5 10) 0 0.4492 0.6121 17 11
( 6064 1uoc_A) ( 463 1bu6_O) 0.2941 0.2778 6.2001 ( 0 7 10) 0 0.3515 0.3323 17 18
( 6064 1uoc_A) ( 464 1bu6_O) 0.2928 0.2928 6.6411 ( 1 8 10) 0 0.5284 0.5284 17 17
( 6064 1uoc_A) ( 471 1bup_A) 0.2353 0.2500 5.7959 ( 0 4 6) 0 0.3477 0.3615 17 16
( 6064 1uoc_A) ( 472 1bup_A) 0.3273 0.3436 8.1422 ( 4 14 28) 0 0.4107 0.5774 17 12
( 6064 1uoc_A) ( 592 1chm_A) 0.2940 0.4161 10.6357 ( 0 8 10) 0 0.5858 0.8200 17 12
( 6064 1uoc_A) ( 703 1cxq_A) 0.2352 0.3993 11.7589 ( 0 4 6) 0 0.4702 0.7944 17 10
( 6064 1uoc_A) ( 713 1cza_N) 0.4110 0.6890 5.2352 ( 1 14 21) 0 0.4659 0.7431 17 10
( 6064 1uoc_A) ( 714 1cza_N) 0.2421 0.2462 8.8494 ( 6 15 21) 0 0.3836 0.4370 17 14
( 6064 1uoc_A) ( 934 1dt9_A) 0.2941 0.5553 6.2054 ( 0 6 10) 0 0.4703 0.8829 17 9
( 6064 1uoc_A) ( 1021 1e3m_A) 0.4705 0.8879 4.6432 ( 0 15 28) 0 0.4792 0.8879 17 9
( 6064 1uoc_A) ( 1033 1e4f_T) 0.2353 0.2857 9.6320 ( 0 5 6) 0 0.3411 0.3670 17 14
( 6064 1uoc_A) ( 1034 1e4f_T) 0.3607 0.3747 7.4217 ( 6 23 36) 0 0.4451 0.5365 17 13
( 6064 1uoc_A) ( 1191 1eke_A) 0.3529 0.4285 6.2935 ( 0 8 15) 0 0.3529 0.4285 17 14
( 6064 1uoc_A) ( 1223 1eo1_A) 0.2758 0.3847 6.8261 ( 1 4 10) 0 0.4117 0.8729 17 8
( 6064 1uoc_A) ( 1289 1ewq_A) 0.4691 0.7798 3.8284 ( 1 14 28) 0 0.4691 0.7798 17 10
( 6064 1uoc_A) ( 1305 1exq_A) 0.2353 0.4442 7.4086 ( 0 4 6) 0 0.3508 0.6232 17 9
( 6064 1uoc_A) ( 1522 1fjg_K) 0.4117 0.9970 5.3152 ( 0 10 21) 0 0.4117 0.9970 17 7
( 6064 1uoc_A) ( 1656 1fxx_A) 0.7608 0.4192 3.2079 ( 3 61 78) 0 0.8121 0.4510 17 31
( 6064 1uoc_A) ( 1778 1g99_A) 0.4117 0.6362 4.3610 ( 0 13 21) 0 0.4117 0.6362 17 11
( 6064 1uoc_A) ( 1779 1g99_A) 0.2927 0.3107 8.3458 ( 1 8 10) 0 0.5093 0.5359 17 16
( 6064 1uoc_A) ( 2218 1hjr_A) 0.5292 0.8963 6.3645 ( 0 20 36) 0 0.5370 0.8963 17 10
( 6064 1uoc_A) ( 2296 1hux_A) 0.2941 0.2778 6.6579 ( 0 8 10) 0 0.4755 0.4575 17 18
( 6064 1uoc_A) ( 2378 1i39_A) 0.2927 0.2974 8.7023 ( 8 24 36) 0 0.4070 0.4565 17 13
( 6064 1uoc_A) ( 2483 1ig8_A) 0.2353 0.3636 5.2073 ( 0 1 6) 0 0.4699 0.7217 17 11
( 6064 1uoc_A) ( 2484 1ig8_A) 0.4107 0.4646 6.4695 ( 1 13 21) 0 0.4598 0.5139 17 15
( 6064 1uoc_A) ( 2491 1ih7_A) 0.4117 0.2592 6.9218 ( 0 14 21) 0 0.7038 0.4442 17 27
( 6064 1uoc_A) ( 2619 1iv0_A) 0.3916 0.5818 4.9370 ( 2 12 21) 0 0.3916 0.5818 17 7
( 6064 1uoc_A) ( 2733 1j54_A) 0.7058 0.9993 3.1266 ( 1 51 66) 0 0.7058 0.9993 17 12
( 6064 1uoc_A) ( 2775 1j9a_A) 0.6035 0.6882 4.3743 ( 5 43 55) 0 0.6035 0.7097 17 14
( 6064 1uoc_A) ( 2821 1jce_A) 0.4621 0.6239 5.3596 ( 2 18 28) 0 0.4621 0.6239 17 12
( 6064 1uoc_A) ( 2822 1jce_A) 0.4621 0.5179 6.0335 ( 2 18 28) 0 0.4702 0.5325 17 15
( 6064 1uoc_A) ( 2910 1jj2_M) 0.3497 0.5194 4.5827 ( 1 8 15) 0 0.3741 0.5194 17 11
( 6064 1uoc_A) ( 2954 1jl1_A) 0.2859 0.4202 8.0408 ( 1 5 10) 0 0.3151 0.4202 17 10
( 6064 1uoc_A) ( 3210 1k8k_A) 0.3445 0.3501 6.5216 ( 4 15 28) 0 0.4449 0.4664 17 16
( 6064 1uoc_A) ( 3260 1kcf_A) 0.5292 0.7486 6.2746 ( 0 23 36) 0 0.5869 0.8259 17 12
( 6064 1uoc_A) ( 3286 1kfs_A) 0.6274 0.8243 2.9460 ( 4 43 55) 0 0.6274 0.8248 17 12
( 6064 1uoc_A) ( 3925 1mgt_A) 0.2353 0.6659 6.2496 ( 0 3 6) 0 0.2353 0.6659 17 6
( 6064 1uoc_A) ( 4043 1mus_A) 0.2941 0.1852 4.2496 ( 0 4 10) 0 0.3481 0.3093 17 27
( 6064 1uoc_A) ( 4057 1mwm_A) 0.2941 0.4543 7.5369 ( 0 7 10) 0 0.4702 0.7238 17 11
( 6064 1uoc_A) ( 4058 1mwm_A) 0.3745 0.4609 8.0617 ( 3 15 21) 0 0.4828 0.6360 17 11
( 6064 1uoc_A) ( 4191 1nbw_A) 0.3916 0.3734 5.0492 ( 2 12 21) 0 0.3916 0.3734 17 18
( 6064 1uoc_A) ( 4193 1nbw_A) 0.4117 0.4375 4.2937 ( 0 12 21) 0 0.4403 0.4605 17 16
( 6064 1uoc_A) ( 4281 1nk4_A) 0.5767 0.7759 3.8138 ( 3 33 45) 0 0.5789 0.7857 17 12
( 6064 1uoc_A) ( 4391 1nu0_A) 0.4705 0.9961 5.6656 ( 0 17 28) 0 0.4705 0.9961 17 8
( 6064 1uoc_A) ( 4469 1o13_A) 0.4112 0.8510 3.8781 ( 1 15 21) 0 0.4667 0.8771 17 8
( 6064 1uoc_A) ( 4935 1p90_A) 0.4117 0.6998 4.3913 ( 0 14 21) 0 0.4702 0.7951 17 10
( 6064 1uoc_A) ( 5120 1pv9_A) 0.2353 0.3333 5.0580 ( 0 4 6) 0 0.5291 0.7482 17 12
( 6064 1uoc_A) ( 5243 1q8i_A) 0.3023 0.2085 5.6813 ( 3 11 15) 0 0.5961 0.3878 17 28
( 6064 1uoc_A) ( 5447 1qtm_A) 0.5030 0.7117 3.6972 ( 3 23 36) 0 0.5030 0.8754 17 9
( 6064 1uoc_A) ( 5500 1qz5_A) 0.2747 0.2817 5.8983 ( 6 17 28) 0 0.4619 0.6635 17 11
( 6064 1uoc_A) ( 5501 1qz5_A) 0.2353 0.2222 6.4324 ( 0 3 6) 0 0.4071 0.3936 17 18
( 6064 1uoc_A) ( 5883 1t7p_A) 0.5267 0.7351 3.7546 ( 2 28 36) 0 0.5406 0.7384 17 12
( 6064 1uoc_A) ( 5906 1tgo_A) 0.3529 0.2222 5.6108 ( 0 10 15) 0 0.7042 0.4443 17 27
( 6064 1uoc_A) ( 6064 1uoc_A) 1.0000 1.0000 0.0000 ( 0 114 136) 0 1.0000 1.0000 17 17
( 6064 1uoc_A) ( 6249 1vhx_A) 0.4700 0.7917 4.8000 ( 1 18 28) 0 0.4700 0.7917 17 10
( 6064 1uoc_A) ( 6299 1vk0_A) 0.2353 0.2667 6.3900 ( 0 3 6) 0 0.4712 0.4781 17 15
( 6064 1uoc_A) ( 6323 1vrt_A) 0.3605 0.4424 6.3247 ( 2 9 21) 0 0.3605 0.4999 17 8
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