------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 703 1cxq_A) ( 247 1az9 ) 0.5999 0.4285 4.4883 ( 0 9 15) 0 0.5999 0.4285 10 14 ( 703 1cxq_A) ( 345 1bco ) 0.8999 0.8181 2.4136 ( 0 26 36) 0 0.8999 0.8181 10 11 ( 703 1cxq_A) ( 463 1bu6_O) 0.5000 0.2778 3.7912 ( 0 5 10) 0 0.5000 0.3085 10 18 ( 703 1cxq_A) ( 464 1bu6_O) 0.5984 0.3528 8.5728 ( 0 11 15) 0 0.5984 0.3528 10 17 ( 703 1cxq_A) ( 471 1bup_A) 0.4995 0.3124 8.2206 ( 0 7 10) 0 0.4995 0.3570 10 16 ( 703 1cxq_A) ( 472 1bup_A) 0.5998 0.4999 4.7893 ( 0 9 15) 0 0.5998 0.4999 10 12 ( 703 1cxq_A) ( 592 1chm_A) 0.6983 0.5826 7.2051 ( 0 15 21) 0 0.6983 0.5826 10 12 ( 703 1cxq_A) ( 703 1cxq_A) 1.0000 1.0000 0.0000 ( 0 38 45) 0 1.0000 1.0000 10 10 ( 703 1cxq_A) ( 713 1cza_N) 0.6991 0.6991 6.1397 ( 0 15 21) 0 0.6991 0.6991 10 10 ( 703 1cxq_A) ( 714 1cza_N) 0.5976 0.4281 9.5388 ( 0 10 15) 0 0.5976 0.4281 10 14 ( 703 1cxq_A) ( 934 1dt9_A) 0.4996 0.5549 7.6902 ( 0 5 10) 0 0.4996 0.5549 10 9 ( 703 1cxq_A) ( 1021 1e3m_A) 0.3999 0.4444 5.9914 ( 0 2 6) 0 0.4531 0.4667 10 9 ( 703 1cxq_A) ( 1033 1e4f_T) 0.6990 0.4998 6.2304 ( 0 15 21) 0 0.6990 0.4998 10 14 ( 703 1cxq_A) ( 1034 1e4f_T) 0.3363 0.2854 6.0129 ( 1 4 6) 0 0.4000 0.3077 10 13 ( 703 1cxq_A) ( 1191 1eke_A) 0.7997 0.5714 3.9424 ( 0 19 28) 0 0.8595 0.6347 10 14 ( 703 1cxq_A) ( 1223 1eo1_A) 0.6998 0.8743 4.2995 ( 0 11 21) 0 0.6998 0.8743 10 8 ( 703 1cxq_A) ( 1289 1ewq_A) 0.6999 0.6999 3.3412 ( 0 10 21) 0 0.6999 0.6999 10 10 ( 703 1cxq_A) ( 1305 1exq_A) 0.7999 0.8888 2.6637 ( 0 22 28) 0 0.7999 0.8888 10 9 ( 703 1cxq_A) ( 1522 1fjg_K) 0.6997 0.9985 4.4698 ( 0 10 21) 0 0.6997 0.9985 10 7 ( 703 1cxq_A) ( 1656 1fxx_A) 0.6974 0.2258 8.0325 ( 0 11 21) 0 0.6974 0.2314 10 31 ( 703 1cxq_A) ( 1778 1g99_A) 0.5000 0.4545 4.4585 ( 0 7 10) 0 0.6997 0.6362 10 11 ( 703 1cxq_A) ( 1779 1g99_A) 0.3999 0.2500 7.3319 ( 0 4 6) 0 0.7486 0.4944 10 16 ( 703 1cxq_A) ( 2218 1hjr_A) 0.4991 0.4991 9.3071 ( 0 7 10) 0 0.4991 0.4991 10 10 ( 703 1cxq_A) ( 2296 1hux_A) 0.5999 0.3333 4.2784 ( 0 10 15) 0 0.5999 0.3333 10 18 ( 703 1cxq_A) ( 2378 1i39_A) 0.7996 0.6153 4.0957 ( 0 20 28) 0 0.7996 0.6153 10 13 ( 703 1cxq_A) ( 2483 1ig8_A) 0.6996 0.6361 4.9830 ( 0 14 21) 0 0.6996 0.6361 10 11 ( 703 1cxq_A) ( 2484 1ig8_A) 0.5993 0.3999 6.8749 ( 0 8 15) 0 0.5993 0.3999 10 15 ( 703 1cxq_A) ( 2491 1ih7_A) 0.4993 0.1852 8.6250 ( 0 4 10) 0 0.5998 0.2580 10 27 ( 703 1cxq_A) ( 2619 1iv0_A) 0.6810 0.9061 3.0132 ( 1 12 21) 0 0.6810 0.9061 10 7 ( 703 1cxq_A) ( 2733 1j54_A) 0.5997 0.4999 5.5915 ( 0 9 15) 0 0.5997 0.4999 10 12 ( 703 1cxq_A) ( 2775 1j9a_A) 0.4997 0.3571 6.9343 ( 0 4 10) 0 0.4997 0.3571 10 14 ( 703 1cxq_A) ( 2821 1jce_A) 0.6998 0.5833 4.1345 ( 0 14 21) 0 0.6998 0.5833 10 12 ( 703 1cxq_A) ( 2822 1jce_A) 0.7982 0.5331 6.2013 ( 0 21 28) 0 0.7982 0.5331 10 15 ( 703 1cxq_A) ( 2910 1jj2_M) 0.5999 0.5454 3.7223 ( 0 9 15) 0 0.5999 0.5454 10 11 ( 703 1cxq_A) ( 2954 1jl1_A) 0.7990 0.7990 5.2752 ( 0 17 28) 0 0.7990 0.7990 10 10 ( 703 1cxq_A) ( 3210 1k8k_A) 0.3654 0.2460 16.0839 ( 1 5 6) 0 0.3654 0.2460 10 16 ( 703 1cxq_A) ( 3260 1kcf_A) 0.4999 0.4166 5.7393 ( 0 3 10) 0 0.4999 0.4166 10 12 ( 703 1cxq_A) ( 3286 1kfs_A) 0.5991 0.4996 7.3754 ( 0 9 15) 0 0.5991 0.4996 10 12 ( 703 1cxq_A) ( 3925 1mgt_A) 0.5997 0.9959 5.7471 ( 0 8 15) 0 0.5997 0.9959 10 6 ( 703 1cxq_A) ( 4043 1mus_A) 0.9951 0.3703 5.4322 ( 1 35 45) 0 0.9951 0.3703 10 27 ( 703 1cxq_A) ( 4057 1mwm_A) 0.6995 0.6361 5.2280 ( 0 15 21) 0 0.6995 0.6361 10 11 ( 703 1cxq_A) ( 4058 1mwm_A) 0.3999 0.3636 7.6189 ( 0 2 6) 0 0.4531 0.4233 10 11 ( 703 1cxq_A) ( 4191 1nbw_A) 0.7927 0.4440 5.5554 ( 1 19 28) 0 0.7927 0.4440 10 18 ( 703 1cxq_A) ( 4193 1nbw_A) 0.3999 0.2500 7.8472 ( 0 3 6) 0 0.6989 0.4374 10 16 ( 703 1cxq_A) ( 4281 1nk4_A) 0.3667 0.3184 11.4319 ( 1 5 6) 0 0.4885 0.4119 10 12 ( 703 1cxq_A) ( 4391 1nu0_A) 0.5984 0.7451 8.6067 ( 0 7 15) 0 0.7920 0.9763 10 8 ( 703 1cxq_A) ( 4469 1o13_A) 0.6918 0.8510 3.8202 ( 1 15 21) 0 0.6918 0.8510 10 8 ( 703 1cxq_A) ( 4935 1p90_A) 0.6997 0.6997 4.8111 ( 0 14 21) 0 0.6997 0.6997 10 10 ( 703 1cxq_A) ( 5120 1pv9_A) 0.6999 0.5833 3.2946 ( 0 13 21) 0 0.6999 0.5833 10 12 ( 703 1cxq_A) ( 5243 1q8i_A) 0.4000 0.1429 3.6645 ( 0 5 6) 0 0.5985 0.2401 10 28 ( 703 1cxq_A) ( 5447 1qtm_A) 0.3999 0.4442 7.7128 ( 0 2 6) 0 0.3999 0.4442 10 9 ( 703 1cxq_A) ( 5500 1qz5_A) 0.6998 0.6363 3.9310 ( 0 12 21) 0 0.6998 0.6363 10 11 ( 703 1cxq_A) ( 5501 1qz5_A) 0.3987 0.2222 13.4378 ( 0 5 6) 0 0.6988 0.3888 10 18 ( 703 1cxq_A) ( 5883 1t7p_A) 0.4000 0.3333 5.5655 ( 0 6 6) 0 0.6983 0.5827 10 12 ( 703 1cxq_A) ( 5906 1tgo_A) 0.3998 0.1481 8.7580 ( 0 4 6) 0 0.5982 0.2222 10 27 ( 703 1cxq_A) ( 6064 1uoc_A) 0.3993 0.2352 11.7589 ( 0 4 6) 0 0.7944 0.4702 10 17 ( 703 1cxq_A) ( 6249 1vhx_A) 0.8830 0.8830 8.8926 ( 1 25 36) 0 0.8830 0.8830 10 10 ( 703 1cxq_A) ( 6299 1vk0_A) 0.3999 0.2667 7.3839 ( 0 4 6) 0 0.4825 0.3309 10 15 ( 703 1cxq_A) ( 6323 1vrt_A) 0.6998 0.8742 4.4327 ( 0 9 21) 0 0.6998 0.8742 10 8 -------------------------------------------------------------------------------------------------------------------------