------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 713 1cza_N) ( 247 1az9 ) 0.4000 0.2857 4.1838 ( 0 5 6) 0 0.4718 0.3513 10 14 ( 713 1cza_N) ( 345 1bco ) 0.6987 0.6355 6.7813 ( 0 13 21) 0 0.6987 0.6355 10 11 ( 713 1cza_N) ( 463 1bu6_O) 0.7992 0.4444 4.9570 ( 0 19 28) 0 0.7992 0.4444 10 18 ( 713 1cza_N) ( 464 1bu6_O) 0.7223 0.4637 4.0621 ( 2 19 28) 0 0.7223 0.4637 10 17 ( 713 1cza_N) ( 471 1bup_A) 0.7996 0.5000 4.1229 ( 0 22 28) 0 0.7996 0.5000 10 16 ( 713 1cza_N) ( 472 1bup_A) 0.2799 0.2643 12.0466 ( 2 6 6) 0 0.2799 0.2643 10 12 ( 713 1cza_N) ( 592 1chm_A) 0.7218 0.6311 5.6372 ( 2 19 28) 0 0.7218 0.6311 10 12 ( 713 1cza_N) ( 703 1cxq_A) 0.6991 0.6991 6.1397 ( 0 15 21) 0 0.6991 0.6991 10 10 ( 713 1cza_N) ( 713 1cza_N) 1.0000 1.0000 0.0000 ( 0 39 45) 0 1.0000 1.0000 10 10 ( 713 1cza_N) ( 714 1cza_N) 0.5348 0.4780 8.5364 ( 3 17 28) 0 0.5647 0.4780 10 14 ( 713 1cza_N) ( 934 1dt9_A) 0.6999 0.7775 3.8439 ( 0 15 21) 0 0.6999 0.7775 10 9 ( 713 1cza_N) ( 1021 1e3m_A) 0.4718 0.4806 5.1051 ( 2 10 21) 0 0.4718 0.4806 10 9 ( 713 1cza_N) ( 1033 1e4f_T) 0.7999 0.5714 3.2439 ( 0 22 28) 0 0.7999 0.5714 10 14 ( 713 1cza_N) ( 1034 1e4f_T) 0.7964 0.6144 3.1513 ( 1 22 28) 0 0.7964 0.6144 10 13 ( 713 1cza_N) ( 1191 1eke_A) 0.7938 0.5703 5.6014 ( 1 20 28) 0 0.7938 0.5703 10 14 ( 713 1cza_N) ( 1223 1eo1_A) 0.6998 0.8745 3.9565 ( 0 12 21) 0 0.6998 0.8745 10 8 ( 713 1cza_N) ( 1289 1ewq_A) 0.6996 0.6996 4.9192 ( 0 11 21) 0 0.6996 0.6996 10 10 ( 713 1cza_N) ( 1305 1exq_A) 0.5994 0.6657 6.5668 ( 0 11 15) 0 0.5996 0.6660 10 9 ( 713 1cza_N) ( 1522 1fjg_K) 0.6992 0.9951 6.0136 ( 0 11 21) 0 0.6992 0.9951 10 7 ( 713 1cza_N) ( 1656 1fxx_A) 0.3960 0.1290 17.9497 ( 0 5 6) 0 0.7421 0.2578 10 31 ( 713 1cza_N) ( 1778 1g99_A) 0.6000 0.5454 3.5204 ( 0 10 15) 0 0.6000 0.5454 10 11 ( 713 1cza_N) ( 1779 1g99_A) 0.7336 0.4924 5.2296 ( 2 20 28) 0 0.7336 0.4924 10 16 ( 713 1cza_N) ( 2218 1hjr_A) 0.7083 0.7083 4.5859 ( 2 18 28) 0 0.7083 0.7083 10 10 ( 713 1cza_N) ( 2296 1hux_A) 0.6998 0.3889 4.1637 ( 0 14 21) 0 0.6998 0.3889 10 18 ( 713 1cza_N) ( 2378 1i39_A) 0.6998 0.5384 4.1861 ( 0 15 21) 0 0.6998 0.5384 10 13 ( 713 1cza_N) ( 2483 1ig8_A) 0.9716 0.8911 3.4753 ( 2 34 45) 0 0.9716 0.8911 10 11 ( 713 1cza_N) ( 2484 1ig8_A) 0.7978 0.5330 6.5104 ( 0 18 28) 0 0.7978 0.5330 10 15 ( 713 1cza_N) ( 2491 1ih7_A) 0.7904 0.2962 6.4014 ( 1 18 28) 0 0.7904 0.2962 10 27 ( 713 1cza_N) ( 2619 1iv0_A) 0.5998 0.8560 5.0073 ( 0 9 15) 0 0.5998 0.8560 10 7 ( 713 1cza_N) ( 2733 1j54_A) 0.6913 0.5798 5.6477 ( 1 15 21) 0 0.6913 0.5798 10 12 ( 713 1cza_N) ( 2775 1j9a_A) 0.7329 0.5568 6.2906 ( 2 20 28) 0 0.7329 0.5568 10 14 ( 713 1cza_N) ( 2821 1jce_A) 0.7997 0.6665 3.9874 ( 0 21 28) 0 0.7997 0.6665 10 12 ( 713 1cza_N) ( 2822 1jce_A) 0.7964 0.5329 3.2744 ( 1 22 28) 0 0.7964 0.5329 10 15 ( 713 1cza_N) ( 2910 1jj2_M) 0.4999 0.4545 5.0601 ( 0 6 10) 0 0.4999 0.4545 10 11 ( 713 1cza_N) ( 2954 1jl1_A) 0.5996 0.5996 6.2193 ( 0 10 15) 0 0.6989 0.6989 10 10 ( 713 1cza_N) ( 3210 1k8k_A) 0.6989 0.4374 6.3942 ( 0 15 21) 0 0.6989 0.4374 10 16 ( 713 1cza_N) ( 3260 1kcf_A) 0.6918 0.6151 4.8916 ( 2 17 28) 0 0.6918 0.6151 10 12 ( 713 1cza_N) ( 3286 1kfs_A) 0.6996 0.5832 4.8646 ( 0 14 21) 0 0.6996 0.5832 10 12 ( 713 1cza_N) ( 3925 1mgt_A) 0.3999 0.6649 7.7095 ( 0 3 6) 0 0.3999 0.6649 10 6 ( 713 1cza_N) ( 4043 1mus_A) 0.6985 0.2592 6.9532 ( 0 12 21) 0 0.6985 0.2592 10 27 ( 713 1cza_N) ( 4057 1mwm_A) 0.7958 0.7247 4.9632 ( 1 22 28) 0 0.7958 0.7247 10 11 ( 713 1cza_N) ( 4058 1mwm_A) 0.4994 0.4542 8.3626 ( 0 6 10) 0 0.4994 0.4542 10 11 ( 713 1cza_N) ( 4191 1nbw_A) 0.7934 0.4441 4.3577 ( 1 19 28) 0 0.8595 0.4976 10 18 ( 713 1cza_N) ( 4193 1nbw_A) 0.7943 0.4994 4.8807 ( 1 20 28) 0 0.7943 0.4994 10 16 ( 713 1cza_N) ( 4281 1nk4_A) 0.6856 0.5774 5.0473 ( 1 13 21) 0 0.6856 0.5774 10 12 ( 713 1cza_N) ( 4391 1nu0_A) 0.6993 0.8728 5.8300 ( 0 12 21) 0 0.6993 0.8728 10 8 ( 713 1cza_N) ( 4469 1o13_A) 0.6918 0.8509 4.1144 ( 1 15 21) 0 0.6918 0.8509 10 8 ( 713 1cza_N) ( 4935 1p90_A) 0.6999 0.6999 3.5335 ( 0 15 21) 0 0.6999 0.6999 10 10 ( 713 1cza_N) ( 5120 1pv9_A) 0.6994 0.5831 5.4638 ( 0 13 21) 0 0.7214 0.6309 10 12 ( 713 1cza_N) ( 5243 1q8i_A) 0.6733 0.2498 5.9334 ( 1 11 21) 0 0.7561 0.2854 10 28 ( 713 1cza_N) ( 5447 1qtm_A) 0.3999 0.4443 7.3462 ( 0 3 6) 0 0.4200 0.4443 10 9 ( 713 1cza_N) ( 5500 1qz5_A) 0.7934 0.7232 4.3331 ( 1 19 28) 0 0.7934 0.7232 10 11 ( 713 1cza_N) ( 5501 1qz5_A) 0.3999 0.2222 7.4659 ( 0 3 6) 0 0.4886 0.2771 10 18 ( 713 1cza_N) ( 5883 1t7p_A) 0.5998 0.4999 4.9956 ( 0 10 15) 0 0.5998 0.4999 10 12 ( 713 1cza_N) ( 5906 1tgo_A) 0.7921 0.2962 6.1625 ( 1 19 28) 0 0.7921 0.2962 10 27 ( 713 1cza_N) ( 6064 1uoc_A) 0.6890 0.4110 5.2352 ( 1 14 21) 0 0.7431 0.4659 10 17 ( 713 1cza_N) ( 6249 1vhx_A) 0.6990 0.6990 6.2783 ( 0 13 21) 0 0.6990 0.6990 10 10 ( 713 1cza_N) ( 6299 1vk0_A) 0.5654 0.4399 5.8093 ( 2 13 21) 0 0.5728 0.4399 10 15 ( 713 1cza_N) ( 6323 1vrt_A) 0.6624 0.7777 6.5573 ( 1 10 21) 0 0.6624 0.7777 10 8 -------------------------------------------------------------------------------------------------------------------------