------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 934 1dt9_A) ( 247 1az9 ) 0.5555 0.3571 4.7296 ( 0 6 10) 0 0.8864 0.5711 9 14 ( 934 1dt9_A) ( 345 1bco ) 0.6662 0.5453 5.4775 ( 0 8 15) 0 0.6662 0.5453 9 11 ( 934 1dt9_A) ( 463 1bu6_O) 0.7771 0.3889 5.0746 ( 0 14 21) 0 0.7771 0.3889 9 18 ( 934 1dt9_A) ( 464 1bu6_O) 0.5553 0.2941 6.1012 ( 0 5 10) 0 0.5553 0.4155 9 17 ( 934 1dt9_A) ( 471 1bup_A) 0.7773 0.4375 4.6289 ( 0 15 21) 0 0.7773 0.4375 9 16 ( 934 1dt9_A) ( 472 1bup_A) 0.7775 0.5833 4.0549 ( 0 13 21) 0 0.7775 0.5833 9 12 ( 934 1dt9_A) ( 592 1chm_A) 0.5555 0.4167 4.0152 ( 0 6 10) 0 0.8865 0.6661 9 12 ( 934 1dt9_A) ( 703 1cxq_A) 0.5549 0.4996 7.6902 ( 0 5 10) 0 0.5549 0.4996 9 10 ( 934 1dt9_A) ( 713 1cza_N) 0.7775 0.6999 3.8439 ( 0 15 21) 0 0.7775 0.6999 9 10 ( 934 1dt9_A) ( 714 1cza_N) 0.7743 0.4996 7.5212 ( 0 11 21) 0 0.7743 0.4996 9 14 ( 934 1dt9_A) ( 934 1dt9_A) 1.0000 1.0000 0.0000 ( 0 29 36) 0 1.0000 1.0000 9 9 ( 934 1dt9_A) ( 1021 1e3m_A) 0.8882 0.8882 4.1702 ( 0 13 28) 0 0.8882 0.8882 9 9 ( 934 1dt9_A) ( 1033 1e4f_T) 0.7774 0.5000 4.1694 ( 0 15 21) 0 0.7774 0.5000 9 14 ( 934 1dt9_A) ( 1034 1e4f_T) 0.7774 0.5384 4.3450 ( 0 15 21) 0 0.7774 0.5384 9 13 ( 934 1dt9_A) ( 1191 1eke_A) 0.4443 0.2857 7.3380 ( 0 3 6) 0 0.5543 0.3570 9 14 ( 934 1dt9_A) ( 1223 1eo1_A) 0.8887 0.9996 3.2531 ( 0 19 28) 0 0.8887 0.9996 9 8 ( 934 1dt9_A) ( 1289 1ewq_A) 0.8880 0.7995 4.5021 ( 0 15 28) 0 0.8880 0.7995 9 10 ( 934 1dt9_A) ( 1305 1exq_A) 0.5548 0.5548 7.8466 ( 0 5 10) 0 0.5548 0.5548 9 9 ( 934 1dt9_A) ( 1522 1fjg_K) 0.7769 0.9970 5.3107 ( 0 11 21) 0 0.7769 0.9970 9 7 ( 934 1dt9_A) ( 1656 1fxx_A) 0.8852 0.2581 6.4620 ( 0 18 28) 0 0.8852 0.2826 9 31 ( 934 1dt9_A) ( 1778 1g99_A) 0.7775 0.6363 4.0932 ( 0 13 21) 0 0.7775 0.6363 9 11 ( 934 1dt9_A) ( 1779 1g99_A) 0.4439 0.2500 9.7179 ( 0 4 6) 0 0.7928 0.5428 9 16 ( 934 1dt9_A) ( 2218 1hjr_A) 0.8879 0.7994 4.6616 ( 0 18 28) 0 0.8879 0.7994 9 10 ( 934 1dt9_A) ( 2296 1hux_A) 0.7770 0.3889 5.1613 ( 0 15 21) 0 0.7770 0.4280 9 18 ( 934 1dt9_A) ( 2378 1i39_A) 0.4441 0.3076 8.6900 ( 0 4 6) 0 0.5554 0.3846 9 13 ( 934 1dt9_A) ( 2483 1ig8_A) 0.8718 0.7208 4.9946 ( 1 17 28) 0 0.8718 0.7208 9 11 ( 934 1dt9_A) ( 2484 1ig8_A) 0.7758 0.4665 6.5195 ( 0 12 21) 0 0.7758 0.4665 9 15 ( 934 1dt9_A) ( 2491 1ih7_A) 0.7761 0.2593 6.2814 ( 0 14 21) 0 0.7761 0.2593 9 27 ( 934 1dt9_A) ( 2619 1iv0_A) 0.7463 0.9049 4.9519 ( 1 12 21) 0 0.7463 0.9049 9 7 ( 934 1dt9_A) ( 2733 1j54_A) 0.7766 0.5830 5.8030 ( 0 15 21) 0 0.7766 0.5830 9 12 ( 934 1dt9_A) ( 2775 1j9a_A) 0.8862 0.5711 6.0041 ( 0 20 28) 0 0.8862 0.5711 9 14 ( 934 1dt9_A) ( 2821 1jce_A) 0.7775 0.5833 4.0570 ( 0 14 21) 0 0.7775 0.5833 9 12 ( 934 1dt9_A) ( 2822 1jce_A) 0.7775 0.4666 3.9061 ( 0 15 21) 0 0.7775 0.4724 9 15 ( 934 1dt9_A) ( 2910 1jj2_M) 0.6661 0.5452 5.8424 ( 0 9 15) 0 0.6661 0.5452 9 11 ( 934 1dt9_A) ( 2954 1jl1_A) 0.4837 0.4529 7.7194 ( 1 6 10) 0 0.4837 0.4529 9 10 ( 934 1dt9_A) ( 3210 1k8k_A) 0.6039 0.3706 5.6004 ( 1 8 15) 0 0.6039 0.3706 9 16 ( 934 1dt9_A) ( 3260 1kcf_A) 0.8858 0.6659 6.1983 ( 0 18 28) 0 0.8858 0.6659 9 12 ( 934 1dt9_A) ( 3286 1kfs_A) 0.5554 0.4166 5.2262 ( 0 6 10) 0 0.5554 0.4166 9 12 ( 934 1dt9_A) ( 3925 1mgt_A) 0.4429 0.6552 12.4244 ( 0 2 6) 0 0.4429 0.6552 9 6 ( 934 1dt9_A) ( 4043 1mus_A) 0.6661 0.2222 5.7680 ( 0 8 15) 0 0.6661 0.2222 9 27 ( 934 1dt9_A) ( 4057 1mwm_A) 0.7774 0.6362 4.4441 ( 0 15 21) 0 0.7774 0.6362 9 11 ( 934 1dt9_A) ( 4058 1mwm_A) 0.4444 0.3636 6.0552 ( 0 3 6) 0 0.7766 0.6527 9 11 ( 934 1dt9_A) ( 4191 1nbw_A) 0.4433 0.2222 11.4747 ( 0 2 6) 0 0.4433 0.2222 9 18 ( 934 1dt9_A) ( 4193 1nbw_A) 0.7852 0.4923 6.5620 ( 2 20 28) 0 0.7852 0.4923 9 16 ( 934 1dt9_A) ( 4281 1nk4_A) 0.7865 0.6370 5.2624 ( 2 20 28) 0 0.7865 0.6370 9 12 ( 934 1dt9_A) ( 4391 1nu0_A) 0.8870 0.9966 5.4781 ( 0 19 28) 0 0.8870 0.9966 9 8 ( 934 1dt9_A) ( 4469 1o13_A) 0.8883 0.9990 3.9971 ( 0 20 28) 0 0.8883 0.9990 9 8 ( 934 1dt9_A) ( 4935 1p90_A) 0.8885 0.7998 3.6971 ( 0 20 28) 0 0.8885 0.7998 9 10 ( 934 1dt9_A) ( 5120 1pv9_A) 0.5555 0.4167 4.1959 ( 0 6 10) 0 0.8872 0.6663 9 12 ( 934 1dt9_A) ( 5243 1q8i_A) 0.7762 0.2500 6.1713 ( 0 13 21) 0 0.7762 0.2500 9 28 ( 934 1dt9_A) ( 5447 1qtm_A) 0.5552 0.5552 6.6863 ( 0 6 10) 0 0.5552 0.5552 9 9 ( 934 1dt9_A) ( 5500 1qz5_A) 0.7775 0.6363 3.8904 ( 0 12 21) 0 0.7775 0.6363 9 11 ( 934 1dt9_A) ( 5501 1qz5_A) 0.4429 0.2222 12.3427 ( 0 3 6) 0 0.4429 0.3121 9 18 ( 934 1dt9_A) ( 5883 1t7p_A) 0.7767 0.5831 5.6566 ( 0 15 21) 0 0.7769 0.5831 9 12 ( 934 1dt9_A) ( 5906 1tgo_A) 0.8836 0.2963 7.0942 ( 0 21 28) 0 0.8836 0.2963 9 27 ( 934 1dt9_A) ( 6064 1uoc_A) 0.5553 0.2941 6.2054 ( 0 6 10) 0 0.8829 0.4703 9 17 ( 934 1dt9_A) ( 6249 1vhx_A) 0.8870 0.7989 5.4840 ( 0 20 28) 0 0.8870 0.7989 9 10 ( 934 1dt9_A) ( 6299 1vk0_A) 0.7763 0.4666 6.0762 ( 0 15 21) 0 0.7763 0.4666 9 15 ( 934 1dt9_A) ( 6323 1vrt_A) 0.7597 0.8435 4.9311 ( 1 14 21) 0 0.7597 0.8435 9 8 -------------------------------------------------------------------------------------------------------------------------