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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:
HELIX min length: 5 STRAND min length: 3
shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100
anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12
Legend:
( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2
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( 1702 1g2o_A) ( 318 1b8o_A) 0.9993 0.8885 2.4181 ( 2 92 120) 0 0.9993 0.8885 16 18
( 1702 1g2o_A) ( 442 1bou_B) 0.3124 0.2500 9.3454 ( 0 7 10) 0 0.8088 0.6488 16 20
( 1702 1g2o_A) ( 541 1c8b_A) 0.3125 0.2778 5.8780 ( 0 4 10) 0 0.4872 0.4530 16 18
( 1702 1g2o_A) ( 551 1cb0_A) 0.9322 0.9322 3.6667 ( 3 74 105) 0 0.9322 0.9322 16 16
( 1702 1g2o_A) ( 583 1cfz_A) 0.2500 0.4000 5.1287 ( 0 0 6) 0 0.3618 0.5041 16 10
( 1702 1g2o_A) ( 584 1cg2_A) 0.3123 0.2631 10.7647 ( 0 6 10) 0 0.7923 0.6754 16 19
( 1702 1g2o_A) ( 811 1de4_C) 0.3125 0.2778 6.7112 ( 0 5 10) 0 0.7417 0.6620 16 18
( 1702 1g2o_A) ( 1577 1fno_A) 0.4373 0.4373 7.2920 ( 0 13 21) 0 0.5221 0.5221 16 16
( 1702 1g2o_A) ( 1702 1g2o_A) 1.0000 1.0000 0.0000 ( 0 94 120) 0 1.0000 1.0000 16 16
( 1702 1g2o_A) ( 2137 1h8l_A) 0.3070 0.2747 5.8556 ( 1 6 10) 0 0.8114 0.7216 16 18
( 1702 1g2o_A) ( 2608 1iu8_A) 0.3750 0.4285 4.8187 ( 0 6 15) 0 0.6695 0.7522 16 14
( 1702 1g2o_A) ( 2834 1je0_A) 0.8739 0.8739 2.7868 ( 2 68 91) 0 0.9241 0.9241 16 16
( 1702 1g2o_A) ( 3019 1jqg_A) 0.3706 0.3706 5.7903 ( 1 8 15) 0 0.8086 0.8086 16 16
( 1702 1g2o_A) ( 3080 1jwq_A) 0.5969 0.7738 4.7371 ( 3 28 45) 0 0.6240 0.9029 16 11
( 1702 1g2o_A) ( 3097 1jys_A) 0.8698 0.8698 3.8294 ( 3 68 91) 0 0.8698 0.8698 16 16
( 1702 1g2o_A) ( 3584 1lam ) 0.3094 0.2169 10.2118 ( 1 7 10) 0 0.8105 0.5649 16 23
( 1702 1g2o_A) ( 3620 1lfw_A) 0.3124 0.3124 9.1953 ( 0 6 10) 0 0.6822 0.6822 16 16
( 1702 1g2o_A) ( 3832 1m4l_A) 0.3125 0.3125 4.3481 ( 0 3 10) 0 0.8078 0.8078 16 16
( 1702 1g2o_A) ( 4591 1obr ) 0.3125 0.2632 5.2174 ( 0 6 10) 0 0.8115 0.6838 16 19
( 1702 1g2o_A) ( 4605 1odk_A) 0.8738 0.8227 3.4637 ( 2 69 91) 0 0.9243 0.8726 16 17
( 1702 1g2o_A) ( 5179 1q1g_A) 0.8689 0.7744 3.6981 ( 3 65 91) 0 0.9031 0.8136 16 18
( 1702 1g2o_A) ( 5416 1qq9_A) 0.3660 0.3770 7.5396 ( 3 13 21) 0 0.6154 0.6402 16 15
( 1702 1g2o_A) ( 5543 1r3n_A) 0.3069 0.2746 10.4441 ( 1 6 10) 0 0.8310 0.7522 16 18
( 1702 1g2o_A) ( 5701 1rtq_A) 0.3124 0.3332 8.9868 ( 0 5 10) 0 0.7455 0.7938 16 15
( 1702 1g2o_A) ( 5724 1rxy_A) 0.9212 0.8241 4.9098 ( 4 74 105) 0 0.9219 0.8387 16 18
( 1702 1g2o_A) ( 5727 1ryb_A) 0.6796 0.8854 5.4760 ( 2 30 55) 0 0.6796 0.8854 16 12
( 1702 1g2o_A) ( 6225 1vgy_A) 0.3125 0.2778 5.8047 ( 0 5 10) 0 0.8072 0.7193 16 18
( 1702 1g2o_A) ( 6233 1vhe_A) 0.4372 0.3683 8.3533 ( 0 15 21) 0 0.8117 0.6896 16 19
( 1702 1g2o_A) ( 6240 1vho_A) 0.3748 0.3157 9.0207 ( 0 12 15) 0 0.8096 0.6830 16 19
( 1702 1g2o_A) ( 6248 1vhw_A) 0.8736 0.8225 3.5287 ( 2 66 91) 0 0.9224 0.8711 16 17
( 1702 1g2o_A) ( 6519 2pth ) 0.6248 0.7687 4.7105 ( 0 23 45) 0 0.6871 0.8451 16 13
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