------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 318 1b8o_A) ( 318 1b8o_A) 1.0000 1.0000 0.0000 ( 0 125 153) 0 1.0000 1.0000 18 18 ( 318 1b8o_A) ( 442 1bou_B) 0.2778 0.2500 6.6456 ( 0 6 10) 0 0.7207 0.6491 18 20 ( 318 1b8o_A) ( 541 1c8b_A) 0.2778 0.2778 5.2816 ( 0 6 10) 0 0.4998 0.4998 18 18 ( 318 1b8o_A) ( 551 1cb0_A) 0.8309 0.9331 3.2381 ( 3 77 105) 0 0.8309 0.9331 18 16 ( 318 1b8o_A) ( 583 1cfz_A) 0.2222 0.4000 4.8278 ( 0 2 6) 0 0.4992 0.8850 18 10 ( 318 1b8o_A) ( 584 1cg2_A) 0.2222 0.2105 6.0057 ( 0 4 6) 0 0.7735 0.7336 18 19 ( 318 1b8o_A) ( 811 1de4_C) 0.5553 0.5553 5.7659 ( 0 22 45) 0 0.7188 0.7188 18 18 ( 318 1b8o_A) ( 1577 1fno_A) 0.2222 0.2500 7.0339 ( 0 0 6) 0 0.5054 0.5624 18 16 ( 318 1b8o_A) ( 1702 1g2o_A) 0.8885 0.9993 2.4181 ( 2 92 120) 0 0.8885 0.9993 18 16 ( 318 1b8o_A) ( 2137 1h8l_A) 0.2777 0.2777 8.2093 ( 0 5 10) 0 0.7770 0.7770 18 18 ( 318 1b8o_A) ( 2608 1iu8_A) 0.5555 0.7140 4.5642 ( 0 27 45) 0 0.6109 0.7849 18 14 ( 318 1b8o_A) ( 2834 1je0_A) 0.8329 0.9367 2.6120 ( 2 80 105) 0 0.8329 0.9367 18 16 ( 318 1b8o_A) ( 3019 1jqg_A) 0.3883 0.4364 5.6116 ( 1 14 21) 0 0.7766 0.8729 18 16 ( 318 1b8o_A) ( 3080 1jwq_A) 0.5555 0.9080 4.6450 ( 0 27 45) 0 0.5555 0.9080 18 11 ( 318 1b8o_A) ( 3097 1jys_A) 0.8313 0.9338 3.6837 ( 3 82 105) 0 0.8313 0.9338 18 16 ( 318 1b8o_A) ( 3584 1lam ) 0.3333 0.2609 6.7431 ( 0 6 15) 0 0.8310 0.6515 18 23 ( 318 1b8o_A) ( 3620 1lfw_A) 0.2778 0.3125 7.3242 ( 0 5 10) 0 0.6641 0.7454 18 16 ( 318 1b8o_A) ( 3832 1m4l_A) 0.3326 0.3737 5.6814 ( 1 11 15) 0 0.7763 0.8724 18 16 ( 318 1b8o_A) ( 4591 1obr ) 0.3883 0.3680 4.0296 ( 1 14 21) 0 0.7773 0.7365 18 19 ( 318 1b8o_A) ( 4605 1odk_A) 0.8327 0.8816 3.4386 ( 2 81 105) 0 0.8327 0.8816 18 17 ( 318 1b8o_A) ( 5179 1q1g_A) 0.8404 0.8404 3.7087 ( 7 88 120) 0 0.8404 0.8404 18 18 ( 318 1b8o_A) ( 5416 1qq9_A) 0.2222 0.2667 5.4752 ( 0 4 6) 0 0.6543 0.7707 18 15 ( 318 1b8o_A) ( 5543 1r3n_A) 0.2760 0.2760 11.7047 ( 1 7 10) 0 0.7767 0.7767 18 18 ( 318 1b8o_A) ( 5701 1rtq_A) 0.2777 0.3332 10.0951 ( 0 2 10) 0 0.7206 0.8627 18 15 ( 318 1b8o_A) ( 5724 1rxy_A) 0.8582 0.8582 4.1551 ( 6 86 120) 0 0.8582 0.8582 18 18 ( 318 1b8o_A) ( 5727 1ryb_A) 0.6657 0.9930 6.3356 ( 1 40 66) 0 0.6657 0.9930 18 12 ( 318 1b8o_A) ( 6225 1vgy_A) 0.2778 0.2778 7.1688 ( 0 2 10) 0 0.7759 0.7759 18 18 ( 318 1b8o_A) ( 6233 1vhe_A) 0.3332 0.3157 9.0827 ( 0 11 15) 0 0.7772 0.7364 18 19 ( 318 1b8o_A) ( 6240 1vho_A) 0.3834 0.3642 9.1225 ( 2 16 21) 0 0.7762 0.7357 18 19 ( 318 1b8o_A) ( 6248 1vhw_A) 0.8746 0.9224 3.7102 ( 5 88 120) 0 0.8746 0.9224 18 17 ( 318 1b8o_A) ( 6519 2pth ) 0.6107 0.8441 5.2483 ( 1 34 55) 0 0.7210 0.9938 18 13 -------------------------------------------------------------------------------------------------------------------------