------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 442 1bou_B) ( 318 1b8o_A) 0.2500 0.2778 6.6456 ( 0 6 10) 0 0.6491 0.7207 20 18 ( 442 1bou_B) ( 442 1bou_B) 1.0000 1.0000 0.0000 ( 0 148 190) 0 1.0000 1.0000 20 20 ( 442 1bou_B) ( 541 1c8b_A) 0.2000 0.2222 5.1155 ( 0 3 6) 0 0.3999 0.4443 20 18 ( 442 1bou_B) ( 551 1cb0_A) 0.2500 0.3125 7.1457 ( 0 6 10) 0 0.5495 0.6861 20 16 ( 442 1bou_B) ( 583 1cfz_A) 0.2000 0.4000 5.6153 ( 0 1 6) 0 0.4494 0.8821 20 10 ( 442 1bou_B) ( 584 1cg2_A) 0.2500 0.2631 7.8377 ( 0 5 10) 0 0.6228 0.6374 20 19 ( 442 1bou_B) ( 811 1de4_C) 0.3000 0.3333 4.5287 ( 0 8 15) 0 0.6986 0.7753 20 18 ( 442 1bou_B) ( 1577 1fno_A) 0.2000 0.2500 6.2738 ( 0 3 6) 0 0.3571 0.4373 20 16 ( 442 1bou_B) ( 1702 1g2o_A) 0.2500 0.3124 9.3454 ( 0 7 10) 0 0.6488 0.8088 20 16 ( 442 1bou_B) ( 2137 1h8l_A) 0.2493 0.2766 12.3645 ( 1 8 10) 0 0.6492 0.7209 20 18 ( 442 1bou_B) ( 2608 1iu8_A) 0.3500 0.5000 3.6879 ( 0 12 21) 0 0.5499 0.7849 20 14 ( 442 1bou_B) ( 2834 1je0_A) 0.2500 0.3125 7.0464 ( 0 6 10) 0 0.6491 0.8099 20 16 ( 442 1bou_B) ( 3019 1jqg_A) 0.2500 0.3124 9.7807 ( 0 3 10) 0 0.6996 0.8737 20 16 ( 442 1bou_B) ( 3080 1jwq_A) 0.3000 0.5452 6.1610 ( 0 9 15) 0 0.4999 0.9080 20 11 ( 442 1bou_B) ( 3097 1jys_A) 0.2500 0.3125 6.3582 ( 0 6 10) 0 0.5994 0.7483 20 16 ( 442 1bou_B) ( 3584 1lam ) 0.3000 0.2609 3.1839 ( 0 9 15) 0 0.7656 0.6778 20 23 ( 442 1bou_B) ( 3620 1lfw_A) 0.2500 0.3125 7.7734 ( 0 6 10) 0 0.3938 0.4821 20 16 ( 442 1bou_B) ( 3832 1m4l_A) 0.2500 0.3125 6.4079 ( 0 6 10) 0 0.6995 0.8734 20 16 ( 442 1bou_B) ( 4591 1obr ) 0.2499 0.2631 11.2630 ( 0 4 10) 0 0.6995 0.7362 20 19 ( 442 1bou_B) ( 4605 1odk_A) 0.2500 0.2941 6.6904 ( 0 6 10) 0 0.6980 0.8191 20 17 ( 442 1bou_B) ( 5179 1q1g_A) 0.2500 0.2777 9.2752 ( 0 5 10) 0 0.6494 0.7213 20 18 ( 442 1bou_B) ( 5416 1qq9_A) 0.2167 0.2447 7.5673 ( 3 8 10) 0 0.6171 0.7923 20 15 ( 442 1bou_B) ( 5543 1r3n_A) 0.2500 0.2778 6.9781 ( 0 8 10) 0 0.7467 0.8278 20 18 ( 442 1bou_B) ( 5701 1rtq_A) 0.2735 0.3208 6.6079 ( 3 11 15) 0 0.6995 0.9312 20 15 ( 442 1bou_B) ( 5724 1rxy_A) 0.2500 0.2778 6.6758 ( 0 6 10) 0 0.6493 0.7211 20 18 ( 442 1bou_B) ( 5727 1ryb_A) 0.2000 0.3333 6.1870 ( 0 0 6) 0 0.5498 0.9138 20 12 ( 442 1bou_B) ( 6225 1vgy_A) 0.2000 0.2222 5.0039 ( 0 3 6) 0 0.7489 0.8315 20 18 ( 442 1bou_B) ( 6233 1vhe_A) 0.2500 0.2632 6.1259 ( 0 7 10) 0 0.7487 0.7878 20 19 ( 442 1bou_B) ( 6240 1vho_A) 0.2500 0.2631 6.7646 ( 0 5 10) 0 0.6996 0.7364 20 19 ( 442 1bou_B) ( 6248 1vhw_A) 0.2500 0.2941 6.5543 ( 0 6 10) 0 0.5996 0.7051 20 17 ( 442 1bou_B) ( 6519 2pth ) 0.2000 0.3077 5.5221 ( 0 3 6) 0 0.5997 0.9202 20 13 -------------------------------------------------------------------------------------------------------------------------