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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:
HELIX min length: 5 STRAND min length: 3
shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100
anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12
Legend:
( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2
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( 4605 1odk_A) ( 318 1b8o_A) 0.8816 0.8327 3.4386 ( 2 81 105) 0 0.8816 0.8327 17 18
( 4605 1odk_A) ( 442 1bou_B) 0.2941 0.2500 6.6904 ( 0 6 10) 0 0.8191 0.6980 17 20
( 4605 1odk_A) ( 541 1c8b_A) 0.4089 0.3867 3.3005 ( 1 10 21) 0 0.5289 0.4996 17 18
( 4605 1odk_A) ( 551 1cb0_A) 0.8233 0.8747 3.2888 ( 1 69 91) 0 0.8781 0.9317 17 16
( 4605 1odk_A) ( 583 1cfz_A) 0.4706 0.7996 4.2900 ( 0 11 28) 0 0.4706 0.7996 17 10
( 4605 1odk_A) ( 584 1cg2_A) 0.2919 0.2619 5.8679 ( 1 7 10) 0 0.7626 0.6830 17 19
( 4605 1odk_A) ( 811 1de4_C) 0.2917 0.2760 11.6114 ( 1 7 10) 0 0.7040 0.6652 17 18
( 4605 1odk_A) ( 1577 1fno_A) 0.2353 0.2500 5.6435 ( 0 1 6) 0 0.5714 0.5918 17 16
( 4605 1odk_A) ( 1702 1g2o_A) 0.8227 0.8738 3.4637 ( 2 69 91) 0 0.8726 0.9243 17 16
( 4605 1odk_A) ( 2137 1h8l_A) 0.3529 0.3333 5.8621 ( 0 8 15) 0 0.7621 0.7203 17 18
( 4605 1odk_A) ( 2608 1iu8_A) 0.5400 0.5683 5.7703 ( 7 42 66) 0 0.5400 0.6416 17 14
( 4605 1odk_A) ( 2834 1je0_A) 0.9407 0.9994 2.0431 ( 2 93 120) 0 0.9407 0.9994 17 16
( 4605 1odk_A) ( 3019 1jqg_A) 0.3529 0.3750 4.5113 ( 0 9 15) 0 0.7628 0.8099 17 16
( 4605 1odk_A) ( 3080 1jwq_A) 0.5882 0.9085 4.0323 ( 0 27 45) 0 0.5882 0.9085 17 11
( 4605 1odk_A) ( 3097 1jys_A) 0.9388 0.9968 2.6131 ( 3 90 120) 0 0.9388 0.9968 17 16
( 4605 1odk_A) ( 3584 1lam ) 0.3529 0.2609 6.4917 ( 0 11 15) 0 0.7633 0.5649 17 23
( 4605 1odk_A) ( 3620 1lfw_A) 0.2941 0.3125 5.0939 ( 0 3 10) 0 0.6468 0.6871 17 16
( 4605 1odk_A) ( 3832 1m4l_A) 0.3257 0.3399 4.5878 ( 2 9 15) 0 0.7625 0.8096 17 16
( 4605 1odk_A) ( 4591 1obr ) 0.3529 0.3158 4.6468 ( 0 8 15) 0 0.7625 0.6829 17 19
( 4605 1odk_A) ( 4605 1odk_A) 1.0000 1.0000 0.0000 ( 0 110 136) 0 1.0000 1.0000 17 17
( 4605 1odk_A) ( 5179 1q1g_A) 0.9938 0.9398 2.3306 ( 4 101 136) 0 0.9938 0.9398 17 18
( 4605 1odk_A) ( 5416 1qq9_A) 0.2917 0.3289 11.5277 ( 1 7 10) 0 0.6462 0.7316 17 15
( 4605 1odk_A) ( 5543 1r3n_A) 0.2927 0.2767 8.8750 ( 1 8 10) 0 0.7642 0.7219 17 18
( 4605 1odk_A) ( 5701 1rtq_A) 0.2941 0.3332 8.5601 ( 0 7 10) 0 0.7050 0.7983 17 15
( 4605 1odk_A) ( 5724 1rxy_A) 0.9849 0.9330 1.9005 ( 5 100 136) 0 0.9849 0.9330 17 18
( 4605 1odk_A) ( 5727 1ryb_A) 0.6427 0.8929 4.1663 ( 2 32 55) 0 0.6427 0.8929 17 12
( 4605 1odk_A) ( 6225 1vgy_A) 0.2353 0.2222 3.2106 ( 0 1 6) 0 0.7637 0.7214 17 18
( 4605 1odk_A) ( 6233 1vhe_A) 0.4117 0.3684 4.6260 ( 0 13 21) 0 0.7645 0.6841 17 19
( 4605 1odk_A) ( 6240 1vho_A) 0.3528 0.3157 9.5713 ( 0 12 15) 0 0.7644 0.6840 17 19
( 4605 1odk_A) ( 6248 1vhw_A) 0.9996 0.9996 1.6096 ( 2 103 136) 0 0.9996 0.9996 17 17
( 4605 1odk_A) ( 6519 2pth ) 0.6432 0.8317 4.0879 ( 2 33 55) 0 0.7019 0.9081 17 13
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