------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 551 1cb0_A) ( 318 1b8o_A) 0.9331 0.8309 3.2381 ( 3 77 105) 0 0.9331 0.8309 16 18 ( 551 1cb0_A) ( 442 1bou_B) 0.3125 0.2500 7.1457 ( 0 6 10) 0 0.6861 0.5495 16 20 ( 551 1cb0_A) ( 541 1c8b_A) 0.3125 0.2778 5.3504 ( 0 6 10) 0 0.5074 0.4666 16 18 ( 551 1cb0_A) ( 551 1cb0_A) 1.0000 1.0000 0.0000 ( 0 97 120) 0 1.0000 1.0000 16 16 ( 551 1cb0_A) ( 583 1cfz_A) 0.2500 0.3999 7.0087 ( 0 2 6) 0 0.3619 0.5043 16 10 ( 551 1cb0_A) ( 584 1cg2_A) 0.2500 0.2105 4.4061 ( 0 2 6) 0 0.6781 0.5749 16 19 ( 551 1cb0_A) ( 811 1de4_C) 0.3125 0.2778 7.1211 ( 0 8 10) 0 0.3670 0.3525 16 18 ( 551 1cb0_A) ( 1577 1fno_A) 0.2499 0.2499 12.1487 ( 0 3 6) 0 0.4279 0.4279 16 16 ( 551 1cb0_A) ( 1702 1g2o_A) 0.9322 0.9322 3.6667 ( 3 74 105) 0 0.9322 0.9322 16 16 ( 551 1cb0_A) ( 2137 1h8l_A) 0.4375 0.3889 4.1441 ( 0 12 21) 0 0.6868 0.6107 16 18 ( 551 1cb0_A) ( 2608 1iu8_A) 0.5624 0.6427 4.4343 ( 0 21 36) 0 0.6239 0.7122 16 14 ( 551 1cb0_A) ( 2834 1je0_A) 0.5000 0.5000 1.8346 ( 0 20 28) 0 0.9304 0.9304 16 16 ( 551 1cb0_A) ( 3019 1jqg_A) 0.3706 0.3706 4.7695 ( 1 8 15) 0 0.7362 0.7362 16 16 ( 551 1cb0_A) ( 3080 1jwq_A) 0.3125 0.4543 7.7533 ( 0 5 10) 0 0.4962 0.7038 16 11 ( 551 1cb0_A) ( 3097 1jys_A) 0.8736 0.8736 3.9877 ( 2 68 91) 0 0.8736 0.8736 16 16 ( 551 1cb0_A) ( 3584 1lam ) 0.3750 0.2609 5.2368 ( 0 7 15) 0 0.6145 0.4393 16 23 ( 551 1cb0_A) ( 3620 1lfw_A) 0.3125 0.3125 6.0713 ( 0 6 10) 0 0.6646 0.6646 16 16 ( 551 1cb0_A) ( 3832 1m4l_A) 0.3125 0.3125 7.6817 ( 0 4 10) 0 0.6985 0.6985 16 16 ( 551 1cb0_A) ( 4591 1obr ) 0.3706 0.3139 4.1975 ( 1 8 15) 0 0.7353 0.6252 16 19 ( 551 1cb0_A) ( 4605 1odk_A) 0.8747 0.8233 3.2888 ( 1 69 91) 0 0.9317 0.8781 16 17 ( 551 1cb0_A) ( 5179 1q1g_A) 0.8564 0.7672 2.7685 ( 4 64 91) 0 0.8564 0.7672 16 18 ( 551 1cb0_A) ( 5416 1qq9_A) 0.2500 0.2667 5.5925 ( 0 5 6) 0 0.6639 0.7016 16 15 ( 551 1cb0_A) ( 5543 1r3n_A) 0.2572 0.2420 9.2167 ( 1 3 10) 0 0.7454 0.6641 16 18 ( 551 1cb0_A) ( 5701 1rtq_A) 0.3125 0.3333 4.6374 ( 0 8 10) 0 0.5149 0.5246 16 15 ( 551 1cb0_A) ( 5724 1rxy_A) 0.8369 0.7558 3.7150 ( 5 66 91) 0 0.8369 0.7641 16 18 ( 551 1cb0_A) ( 5727 1ryb_A) 0.6153 0.7955 5.4526 ( 2 25 45) 0 0.6237 0.8280 16 12 ( 551 1cb0_A) ( 6225 1vgy_A) 0.3124 0.2777 9.1697 ( 0 5 10) 0 0.7024 0.6491 16 18 ( 551 1cb0_A) ( 6233 1vhe_A) 0.3107 0.2624 4.9462 ( 1 8 10) 0 0.8201 0.7117 16 19 ( 551 1cb0_A) ( 6240 1vho_A) 0.2500 0.2105 3.8648 ( 0 4 6) 0 0.6838 0.5945 16 19 ( 551 1cb0_A) ( 6248 1vhw_A) 0.8691 0.8191 3.2114 ( 3 65 91) 0 0.9016 0.8553 16 17 ( 551 1cb0_A) ( 6519 2pth ) 0.5624 0.6920 4.8902 ( 0 19 36) 0 0.6796 0.8246 16 13 -------------------------------------------------------------------------------------------------------------------------