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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:
HELIX min length: 5 STRAND min length: 3
shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100
anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12
Legend:
( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2
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( 5724 1rxy_A) ( 318 1b8o_A) 0.8582 0.8582 4.1551 ( 6 86 120) 0 0.8582 0.8582 18 18
( 5724 1rxy_A) ( 442 1bou_B) 0.2778 0.2500 6.6758 ( 0 6 10) 0 0.7211 0.6493 18 20
( 5724 1rxy_A) ( 541 1c8b_A) 0.2777 0.2777 10.2341 ( 0 1 10) 0 0.5549 0.5549 18 18
( 5724 1rxy_A) ( 551 1cb0_A) 0.7558 0.8369 3.7150 ( 5 66 91) 0 0.7641 0.8369 18 16
( 5724 1rxy_A) ( 583 1cfz_A) 0.2710 0.2746 6.8966 ( 8 22 45) 0 0.2939 0.4000 18 10
( 5724 1rxy_A) ( 584 1cg2_A) 0.2222 0.2105 5.9556 ( 0 5 6) 0 0.7207 0.6830 18 19
( 5724 1rxy_A) ( 811 1de4_C) 0.2778 0.2778 5.8347 ( 0 2 10) 0 0.6814 0.6814 18 18
( 5724 1rxy_A) ( 1577 1fno_A) 0.2222 0.2500 5.8945 ( 0 3 6) 0 0.4996 0.5617 18 16
( 5724 1rxy_A) ( 1702 1g2o_A) 0.8241 0.9212 4.9098 ( 4 74 105) 0 0.8387 0.9219 18 16
( 5724 1rxy_A) ( 2137 1h8l_A) 0.3333 0.3333 6.3355 ( 0 7 15) 0 0.7200 0.7200 18 18
( 5724 1rxy_A) ( 2608 1iu8_A) 0.3889 0.4999 5.6699 ( 0 15 21) 0 0.5550 0.7122 18 14
( 5724 1rxy_A) ( 2834 1je0_A) 0.8827 0.9889 2.8018 ( 4 87 120) 0 0.8827 0.9889 18 16
( 5724 1rxy_A) ( 3019 1jqg_A) 0.3801 0.4222 5.7740 ( 2 14 21) 0 0.7206 0.8095 18 16
( 5724 1rxy_A) ( 3080 1jwq_A) 0.5555 0.9083 4.2777 ( 0 25 45) 0 0.5555 0.9083 18 11
( 5724 1rxy_A) ( 3097 1jys_A) 0.8586 0.9480 2.8218 ( 6 86 120) 0 0.8586 0.9480 18 16
( 5724 1rxy_A) ( 3584 1lam ) 0.3332 0.2608 9.0636 ( 0 8 15) 0 0.6654 0.5214 18 23
( 5724 1rxy_A) ( 3620 1lfw_A) 0.2222 0.2500 3.9150 ( 0 1 6) 0 0.6138 0.6871 18 16
( 5724 1rxy_A) ( 3832 1m4l_A) 0.3323 0.3732 4.7390 ( 1 10 15) 0 0.7216 0.8115 18 16
( 5724 1rxy_A) ( 4591 1obr ) 0.3186 0.3043 4.4284 ( 2 10 15) 0 0.7203 0.6827 18 19
( 5724 1rxy_A) ( 4605 1odk_A) 0.9330 0.9849 1.9005 ( 5 100 136) 0 0.9330 0.9849 18 17
( 5724 1rxy_A) ( 5179 1q1g_A) 0.9443 0.9443 2.3158 ( 1 96 136) 0 0.9443 0.9443 18 18
( 5724 1rxy_A) ( 5416 1qq9_A) 0.2777 0.3332 8.6700 ( 0 5 10) 0 0.6105 0.7319 18 15
( 5724 1rxy_A) ( 5543 1r3n_A) 0.2778 0.2778 6.6451 ( 0 5 10) 0 0.7208 0.7208 18 18
( 5724 1rxy_A) ( 5701 1rtq_A) 0.3333 0.4000 5.0909 ( 0 10 15) 0 0.6661 0.7986 18 15
( 5724 1rxy_A) ( 5724 1rxy_A) 1.0000 1.0000 0.0000 ( 0 115 153) 0 1.0000 1.0000 18 18
( 5724 1rxy_A) ( 5727 1ryb_A) 0.6078 0.8927 4.3809 ( 2 32 55) 0 0.6078 0.8927 18 12
( 5724 1rxy_A) ( 6225 1vgy_A) 0.2222 0.2222 3.7685 ( 0 1 6) 0 0.7214 0.7214 18 18
( 5724 1rxy_A) ( 6233 1vhe_A) 0.2778 0.2632 5.2032 ( 0 6 10) 0 0.7739 0.7339 18 19
( 5724 1rxy_A) ( 6240 1vho_A) 0.2778 0.2632 5.5012 ( 0 4 10) 0 0.7219 0.6839 18 19
( 5724 1rxy_A) ( 6248 1vhw_A) 0.9440 0.9995 2.3251 ( 2 98 136) 0 0.9440 0.9995 18 17
( 5724 1rxy_A) ( 6519 2pth ) 0.6078 0.8298 4.3248 ( 2 32 55) 0 0.6633 0.9066 18 13
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