------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 583 1cfz_A) ( 318 1b8o_A) 0.4000 0.2222 4.8278 ( 0 2 6) 0 0.8850 0.4992 10 18 ( 583 1cfz_A) ( 442 1bou_B) 0.4000 0.2000 5.6153 ( 0 1 6) 0 0.8821 0.4494 10 20 ( 583 1cfz_A) ( 541 1c8b_A) 0.7996 0.4444 4.2359 ( 0 12 28) 0 0.7999 0.4444 10 18 ( 583 1cfz_A) ( 551 1cb0_A) 0.3999 0.2500 7.0087 ( 0 2 6) 0 0.5043 0.3619 10 16 ( 583 1cfz_A) ( 583 1cfz_A) 1.0000 1.0000 0.0000 ( 0 25 45) 0 1.0000 1.0000 10 10 ( 583 1cfz_A) ( 584 1cg2_A) 0.5000 0.2632 3.5096 ( 0 8 10) 0 0.5000 0.2678 10 19 ( 583 1cfz_A) ( 811 1de4_C) 0.8645 0.4979 4.5016 ( 1 14 36) 0 0.9898 0.5550 10 18 ( 583 1cfz_A) ( 1577 1fno_A) 0.3999 0.2500 7.0469 ( 0 2 6) 0 0.4529 0.3500 10 16 ( 583 1cfz_A) ( 1702 1g2o_A) 0.4000 0.2500 5.1287 ( 0 0 6) 0 0.5041 0.3618 10 16 ( 583 1cfz_A) ( 2137 1h8l_A) 0.8784 0.4988 3.8325 ( 1 16 36) 0 0.8784 0.4988 10 18 ( 583 1cfz_A) ( 2608 1iu8_A) 0.8993 0.6427 4.1779 ( 0 15 36) 0 0.8993 0.6427 10 14 ( 583 1cfz_A) ( 2834 1je0_A) 0.5734 0.4875 4.6752 ( 3 18 36) 0 0.6369 0.5415 10 16 ( 583 1cfz_A) ( 3019 1jqg_A) 0.8829 0.5608 3.2402 ( 1 17 36) 0 0.8994 0.5624 10 16 ( 583 1cfz_A) ( 3080 1jwq_A) 0.7998 0.7272 3.4722 ( 0 13 28) 0 0.7998 0.7272 10 11 ( 583 1cfz_A) ( 3097 1jys_A) 0.8722 0.5597 4.5591 ( 1 15 36) 0 0.8722 0.5597 10 16 ( 583 1cfz_A) ( 3584 1lam ) 0.4000 0.1739 4.6030 ( 0 0 6) 0 0.9878 0.4346 10 23 ( 583 1cfz_A) ( 3620 1lfw_A) 0.5000 0.3125 3.6507 ( 0 7 10) 0 0.5000 0.3125 10 16 ( 583 1cfz_A) ( 3832 1m4l_A) 0.8726 0.5597 3.7599 ( 1 15 36) 0 0.8990 0.5624 10 16 ( 583 1cfz_A) ( 4591 1obr ) 0.8829 0.4730 3.2426 ( 1 17 36) 0 0.8994 0.4737 10 19 ( 583 1cfz_A) ( 4605 1odk_A) 0.7996 0.4706 4.2900 ( 0 11 28) 0 0.7996 0.4706 10 17 ( 583 1cfz_A) ( 5179 1q1g_A) 0.7998 0.4444 3.5512 ( 0 9 28) 0 0.7998 0.4718 10 18 ( 583 1cfz_A) ( 5416 1qq9_A) 0.6000 0.4000 3.1298 ( 0 6 15) 0 0.6000 0.4000 10 15 ( 583 1cfz_A) ( 5543 1r3n_A) 0.8724 0.4984 4.1343 ( 1 15 36) 0 0.8724 0.4984 10 18 ( 583 1cfz_A) ( 5701 1rtq_A) 0.5819 0.3975 4.2685 ( 1 10 15) 0 0.7729 0.5295 10 15 ( 583 1cfz_A) ( 5724 1rxy_A) 0.3997 0.2222 9.6411 ( 0 0 6) 0 0.3999 0.2939 10 18 ( 583 1cfz_A) ( 5727 1ryb_A) 0.8783 0.7410 4.0473 ( 1 16 36) 0 0.8783 0.7410 10 12 ( 583 1cfz_A) ( 6225 1vgy_A) 0.8645 0.4979 4.4103 ( 1 14 36) 0 0.8645 0.4979 10 18 ( 583 1cfz_A) ( 6233 1vhe_A) 0.8784 0.4728 3.7815 ( 1 16 36) 0 0.8784 0.4728 10 19 ( 583 1cfz_A) ( 6240 1vho_A) 0.8888 0.4732 3.2403 ( 1 19 36) 0 0.8974 0.4736 10 19 ( 583 1cfz_A) ( 6248 1vhw_A) 0.7996 0.4706 4.3124 ( 0 11 28) 0 0.8936 0.5290 10 17 ( 583 1cfz_A) ( 6519 2pth ) 0.8826 0.6875 3.9659 ( 1 17 36) 0 0.8826 0.6875 10 13 -------------------------------------------------------------------------------------------------------------------------