------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 584 1cg2_A) ( 318 1b8o_A) 0.2105 0.2222 6.0057 ( 0 4 6) 0 0.7336 0.7735 19 18 ( 584 1cg2_A) ( 442 1bou_B) 0.2631 0.2500 7.8377 ( 0 5 10) 0 0.6374 0.6228 19 20 ( 584 1cg2_A) ( 541 1c8b_A) 0.2632 0.2778 4.1210 ( 0 5 10) 0 0.4210 0.4444 19 18 ( 584 1cg2_A) ( 551 1cb0_A) 0.2105 0.2500 4.4061 ( 0 2 6) 0 0.5749 0.6781 19 16 ( 584 1cg2_A) ( 583 1cfz_A) 0.2632 0.5000 3.5096 ( 0 8 10) 0 0.2678 0.5000 19 10 ( 584 1cg2_A) ( 584 1cg2_A) 1.0000 1.0000 0.0000 ( 0 129 171) 0 1.0000 1.0000 19 19 ( 584 1cg2_A) ( 811 1de4_C) 0.7356 0.7762 6.2159 ( 0 50 91) 0 0.7826 0.8244 19 18 ( 584 1cg2_A) ( 1577 1fno_A) 0.7366 0.8745 3.6993 ( 1 57 91) 0 0.7764 0.9079 19 16 ( 584 1cg2_A) ( 1702 1g2o_A) 0.2631 0.3123 10.7647 ( 0 6 10) 0 0.6754 0.7923 19 16 ( 584 1cg2_A) ( 2137 1h8l_A) 0.7361 0.7768 5.2654 ( 1 52 91) 0 0.7361 0.7768 19 18 ( 584 1cg2_A) ( 2608 1iu8_A) 0.2632 0.3571 3.4629 ( 0 6 10) 0 0.5260 0.7129 19 14 ( 584 1cg2_A) ( 2834 1je0_A) 0.2105 0.2500 3.8356 ( 0 5 6) 0 0.6831 0.8100 19 16 ( 584 1cg2_A) ( 3019 1jqg_A) 0.6841 0.8122 3.4187 ( 1 51 78) 0 0.7847 0.9263 19 16 ( 584 1cg2_A) ( 3080 1jwq_A) 0.5259 0.9032 5.3712 ( 1 25 45) 0 0.5259 0.9032 19 11 ( 584 1cg2_A) ( 3097 1jys_A) 0.2632 0.3125 5.3177 ( 0 5 10) 0 0.6836 0.8110 19 16 ( 584 1cg2_A) ( 3584 1lam ) 0.7364 0.6085 4.7766 ( 0 57 91) 0 0.7364 0.6085 19 23 ( 584 1cg2_A) ( 3620 1lfw_A) 0.7785 0.9125 4.0839 ( 4 65 105) 0 0.7785 0.9125 19 16 ( 584 1cg2_A) ( 3832 1m4l_A) 0.6841 0.8121 3.5026 ( 1 49 78) 0 0.7875 0.9330 19 16 ( 584 1cg2_A) ( 4591 1obr ) 0.6814 0.6814 5.8764 ( 6 57 91) 0 0.7843 0.7843 19 19 ( 584 1cg2_A) ( 4605 1odk_A) 0.2619 0.2919 5.8679 ( 1 7 10) 0 0.6830 0.7626 19 17 ( 584 1cg2_A) ( 5179 1q1g_A) 0.2105 0.2222 3.6601 ( 0 1 6) 0 0.6832 0.7210 19 18 ( 584 1cg2_A) ( 5416 1qq9_A) 0.6297 0.7938 4.7412 ( 2 39 66) 0 0.6297 0.7938 19 15 ( 584 1cg2_A) ( 5543 1r3n_A) 0.7365 0.7773 4.5411 ( 0 59 91) 0 0.7365 0.7773 19 18 ( 584 1cg2_A) ( 5701 1rtq_A) 0.7366 0.9327 3.9080 ( 0 59 91) 0 0.7366 0.9327 19 15 ( 584 1cg2_A) ( 5724 1rxy_A) 0.2105 0.2222 5.9556 ( 0 5 6) 0 0.6830 0.7207 19 18 ( 584 1cg2_A) ( 5727 1ryb_A) 0.2105 0.3333 7.9681 ( 0 0 6) 0 0.5787 0.9146 19 12 ( 584 1cg2_A) ( 6225 1vgy_A) 0.8945 0.9441 3.2035 ( 1 91 136) 0 0.8945 0.9441 19 18 ( 584 1cg2_A) ( 6233 1vhe_A) 0.8856 0.8856 5.2124 ( 4 83 136) 0 0.8856 0.8856 19 19 ( 584 1cg2_A) ( 6240 1vho_A) 0.8878 0.8878 5.4487 ( 4 92 136) 0 0.8878 0.8878 19 19 ( 584 1cg2_A) ( 6248 1vhw_A) 0.2619 0.2919 5.9927 ( 1 7 10) 0 0.6830 0.7627 19 17 ( 584 1cg2_A) ( 6519 2pth ) 0.2105 0.3077 7.5819 ( 0 4 6) 0 0.5788 0.8452 19 13 -------------------------------------------------------------------------------------------------------------------------