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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:
HELIX min length: 5 STRAND min length: 3
shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100
anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12
Legend:
( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2
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( 6233 1vhe_A) ( 318 1b8o_A) 0.6310 0.6659 5.9746 ( 1 44 66) 0 0.7364 0.7772 19 18
( 6233 1vhe_A) ( 442 1bou_B) 0.2632 0.2500 6.1259 ( 0 7 10) 0 0.7878 0.7487 19 20
( 6233 1vhe_A) ( 541 1c8b_A) 0.3158 0.3333 7.0856 ( 0 5 15) 0 0.5113 0.5363 19 18
( 6233 1vhe_A) ( 551 1cb0_A) 0.2624 0.3107 4.9462 ( 1 8 10) 0 0.7117 0.8201 19 16
( 6233 1vhe_A) ( 583 1cfz_A) 0.4728 0.8784 3.7815 ( 1 16 36) 0 0.4728 0.8784 19 10
( 6233 1vhe_A) ( 584 1cg2_A) 0.8856 0.8856 5.2124 ( 4 83 136) 0 0.8856 0.8856 19 19
( 6233 1vhe_A) ( 811 1de4_C) 0.7358 0.7764 5.9160 ( 1 60 91) 0 0.7358 0.7764 19 18
( 6233 1vhe_A) ( 1577 1fno_A) 0.6841 0.8122 3.0380 ( 1 47 78) 0 0.6841 0.8122 19 16
( 6233 1vhe_A) ( 1702 1g2o_A) 0.3683 0.4372 8.3533 ( 0 15 21) 0 0.6896 0.8117 19 16
( 6233 1vhe_A) ( 2137 1h8l_A) 0.7365 0.7773 4.5600 ( 0 55 91) 0 0.7746 0.8141 19 18
( 6233 1vhe_A) ( 2608 1iu8_A) 0.5788 0.7853 4.4586 ( 0 33 55) 0 0.5788 0.7853 19 14
( 6233 1vhe_A) ( 2834 1je0_A) 0.4208 0.4995 8.1681 ( 0 20 28) 0 0.6841 0.8123 19 16
( 6233 1vhe_A) ( 3019 1jqg_A) 0.7367 0.8746 3.7827 ( 0 59 91) 0 0.7655 0.8846 19 16
( 6233 1vhe_A) ( 3080 1jwq_A) 0.5534 0.7759 7.6913 ( 4 35 55) 0 0.5534 0.9088 19 11
( 6233 1vhe_A) ( 3097 1jys_A) 0.2632 0.3125 6.3331 ( 0 8 10) 0 0.6841 0.8123 19 16
( 6233 1vhe_A) ( 3584 1lam ) 0.7883 0.6517 5.6844 ( 0 67 105) 0 0.7883 0.6517 19 23
( 6233 1vhe_A) ( 3620 1lfw_A) 0.7893 0.9371 3.3612 ( 1 67 105) 0 0.7893 0.9371 19 16
( 6233 1vhe_A) ( 3832 1m4l_A) 0.7366 0.8745 3.9452 ( 0 56 91) 0 0.7594 0.8745 19 16
( 6233 1vhe_A) ( 4591 1obr ) 0.7367 0.7367 3.8073 ( 0 57 91) 0 0.7367 0.7367 19 19
( 6233 1vhe_A) ( 4605 1odk_A) 0.5263 0.5881 4.3192 ( 0 30 45) 0 0.6841 0.7645 19 17
( 6233 1vhe_A) ( 5179 1q1g_A) 0.2991 0.3121 7.1362 ( 2 9 15) 0 0.6841 0.7220 19 18
( 6233 1vhe_A) ( 5416 1qq9_A) 0.6798 0.8525 5.0233 ( 3 52 78) 0 0.6798 0.8525 19 15
( 6233 1vhe_A) ( 5543 1r3n_A) 0.7890 0.8327 3.0579 ( 2 74 105) 0 0.7890 0.8327 19 18
( 6233 1vhe_A) ( 5701 1rtq_A) 0.7365 0.9323 4.4570 ( 0 63 91) 0 0.7365 0.9323 19 15
( 6233 1vhe_A) ( 5724 1rxy_A) 0.2632 0.2778 5.2032 ( 0 6 10) 0 0.7339 0.7739 19 18
( 6233 1vhe_A) ( 5727 1ryb_A) 0.2631 0.4163 9.0431 ( 0 4 10) 0 0.5789 0.9163 19 12
( 6233 1vhe_A) ( 6225 1vgy_A) 0.8816 0.9274 3.9493 ( 5 91 136) 0 0.8816 0.9274 19 18
( 6233 1vhe_A) ( 6233 1vhe_A) 1.0000 1.0000 0.0000 ( 0 134 171) 0 1.0000 1.0000 19 19
( 6233 1vhe_A) ( 6240 1vho_A) 0.9305 0.9305 2.3256 ( 6 109 153) 0 0.9305 0.9305 19 19
( 6233 1vhe_A) ( 6248 1vhw_A) 0.2631 0.2941 6.8473 ( 0 7 10) 0 0.6841 0.7645 19 17
( 6233 1vhe_A) ( 6519 2pth ) 0.2631 0.3844 9.0960 ( 0 4 10) 0 0.6315 0.9224 19 13
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