-------------------------------------------------------------------------------------------------------------------------
Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:
HELIX min length: 5 STRAND min length: 3
shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100
anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12
Legend:
( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2
-------------------------------------------------------------------------------------------------------------------------
( 6248 1vhw_A) ( 318 1b8o_A) 0.9224 0.8746 3.7102 ( 5 88 120) 0 0.9224 0.8746 17 18
( 6248 1vhw_A) ( 442 1bou_B) 0.2941 0.2500 6.5543 ( 0 6 10) 0 0.7051 0.5996 17 20
( 6248 1vhw_A) ( 541 1c8b_A) 0.3497 0.3309 3.2075 ( 1 8 15) 0 0.4769 0.4645 17 18
( 6248 1vhw_A) ( 551 1cb0_A) 0.8191 0.8691 3.2114 ( 3 65 91) 0 0.8553 0.9016 17 16
( 6248 1vhw_A) ( 583 1cfz_A) 0.4706 0.7996 4.3124 ( 0 11 28) 0 0.5290 0.8936 17 10
( 6248 1vhw_A) ( 584 1cg2_A) 0.2919 0.2619 5.9927 ( 1 7 10) 0 0.7627 0.6830 17 19
( 6248 1vhw_A) ( 811 1de4_C) 0.2757 0.2635 12.3629 ( 2 8 10) 0 0.7038 0.6651 17 18
( 6248 1vhw_A) ( 1577 1fno_A) 0.2941 0.3125 5.6600 ( 0 1 10) 0 0.6260 0.6596 17 16
( 6248 1vhw_A) ( 1702 1g2o_A) 0.8225 0.8736 3.5287 ( 2 66 91) 0 0.8711 0.9224 17 16
( 6248 1vhw_A) ( 2137 1h8l_A) 0.4029 0.3821 5.2962 ( 2 15 21) 0 0.7621 0.7202 17 18
( 6248 1vhw_A) ( 2608 1iu8_A) 0.7054 0.8559 5.1936 ( 0 42 66) 0 0.7054 0.8559 17 14
( 6248 1vhw_A) ( 2834 1je0_A) 0.9340 0.9904 2.2890 ( 4 90 120) 0 0.9340 0.9904 17 16
( 6248 1vhw_A) ( 3019 1jqg_A) 0.3529 0.3750 4.2181 ( 0 9 15) 0 0.7627 0.8098 17 16
( 6248 1vhw_A) ( 3080 1jwq_A) 0.5882 0.9085 4.0392 ( 0 27 45) 0 0.5882 0.9085 17 11
( 6248 1vhw_A) ( 3097 1jys_A) 0.9210 0.9731 2.8436 ( 5 86 120) 0 0.9210 0.9731 17 16
( 6248 1vhw_A) ( 3584 1lam ) 0.3529 0.2609 6.2897 ( 0 11 15) 0 0.7634 0.5649 17 23
( 6248 1vhw_A) ( 3620 1lfw_A) 0.2353 0.2500 3.4894 ( 0 1 6) 0 0.6773 0.7123 17 16
( 6248 1vhw_A) ( 3832 1m4l_A) 0.2941 0.3125 6.1135 ( 0 5 10) 0 0.7639 0.8114 17 16
( 6248 1vhw_A) ( 4591 1obr ) 0.2941 0.2632 4.8207 ( 0 6 10) 0 0.7637 0.6836 17 19
( 6248 1vhw_A) ( 4605 1odk_A) 0.9996 0.9996 1.6096 ( 2 103 136) 0 0.9996 0.9996 17 17
( 6248 1vhw_A) ( 5179 1q1g_A) 0.9998 0.9443 2.3891 ( 1 98 136) 0 0.9998 0.9443 17 18
( 6248 1vhw_A) ( 5416 1qq9_A) 0.2899 0.3257 10.7238 ( 1 6 10) 0 0.6461 0.7315 17 15
( 6248 1vhw_A) ( 5543 1r3n_A) 0.2927 0.2767 8.8341 ( 1 8 10) 0 0.7643 0.7219 17 18
( 6248 1vhw_A) ( 5701 1rtq_A) 0.2941 0.3333 4.7758 ( 0 6 10) 0 0.7049 0.7982 17 15
( 6248 1vhw_A) ( 5724 1rxy_A) 0.9995 0.9440 2.3251 ( 2 98 136) 0 0.9995 0.9440 17 18
( 6248 1vhw_A) ( 5727 1ryb_A) 0.6427 0.8928 4.3175 ( 2 32 55) 0 0.6427 0.8928 17 12
( 6248 1vhw_A) ( 6225 1vgy_A) 0.2353 0.2222 7.8092 ( 0 3 6) 0 0.7637 0.7215 17 18
( 6248 1vhw_A) ( 6233 1vhe_A) 0.2941 0.2631 6.8473 ( 0 7 10) 0 0.7645 0.6841 17 19
( 6248 1vhw_A) ( 6240 1vho_A) 0.3527 0.3157 9.8719 ( 0 12 15) 0 0.7643 0.6840 17 19
( 6248 1vhw_A) ( 6248 1vhw_A) 1.0000 1.0000 0.0000 ( 0 104 136) 0 1.0000 1.0000 17 17
( 6248 1vhw_A) ( 6519 2pth ) 0.6432 0.8317 4.1683 ( 2 33 55) 0 0.7019 0.9082 17 13
-------------------------------------------------------------------------------------------------------------------------