------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 6519 2pth ) ( 318 1b8o_A) 0.8441 0.6107 5.2483 ( 1 34 55) 0 0.9938 0.7210 13 18 ( 6519 2pth ) ( 442 1bou_B) 0.3077 0.2000 5.5221 ( 0 3 6) 0 0.9202 0.5997 13 20 ( 6519 2pth ) ( 541 1c8b_A) 0.5385 0.3889 2.6339 ( 0 13 21) 0 0.5385 0.3936 13 18 ( 6519 2pth ) ( 551 1cb0_A) 0.6920 0.5624 4.8902 ( 0 19 36) 0 0.8246 0.6796 13 16 ( 6519 2pth ) ( 583 1cfz_A) 0.6875 0.8826 3.9659 ( 1 17 36) 0 0.6875 0.8826 13 10 ( 6519 2pth ) ( 584 1cg2_A) 0.3077 0.2105 7.5819 ( 0 4 6) 0 0.8452 0.5788 13 19 ( 6519 2pth ) ( 811 1de4_C) 0.3568 0.2715 4.6448 ( 1 5 10) 0 0.9177 0.6656 13 18 ( 6519 2pth ) ( 1577 1fno_A) 0.3077 0.2500 6.6053 ( 0 2 6) 0 0.4611 0.3748 13 16 ( 6519 2pth ) ( 1702 1g2o_A) 0.7687 0.6248 4.7105 ( 0 23 45) 0 0.8451 0.6871 13 16 ( 6519 2pth ) ( 2137 1h8l_A) 0.3077 0.2222 5.5107 ( 0 2 6) 0 0.8454 0.6238 13 18 ( 6519 2pth ) ( 2608 1iu8_A) 0.6919 0.6426 4.9365 ( 0 16 36) 0 0.6919 0.6426 13 14 ( 6519 2pth ) ( 2834 1je0_A) 0.3077 0.2500 3.9617 ( 0 2 6) 0 0.9080 0.7445 13 16 ( 6519 2pth ) ( 3019 1jqg_A) 0.3846 0.3125 6.5510 ( 0 2 10) 0 0.9217 0.7495 13 16 ( 6519 2pth ) ( 3080 1jwq_A) 0.5384 0.6363 3.2187 ( 0 10 21) 0 0.5384 0.6363 13 11 ( 6519 2pth ) ( 3097 1jys_A) 0.3077 0.2500 3.8179 ( 0 2 6) 0 0.9214 0.7494 13 16 ( 6519 2pth ) ( 3584 1lam ) 0.3843 0.2174 9.9098 ( 0 7 10) 0 0.9962 0.5650 13 23 ( 6519 2pth ) ( 3620 1lfw_A) 0.3077 0.2500 6.6243 ( 0 0 6) 0 0.7689 0.6249 13 16 ( 6519 2pth ) ( 3832 1m4l_A) 0.3846 0.3125 6.4327 ( 0 2 10) 0 0.9217 0.7495 13 16 ( 6519 2pth ) ( 4591 1obr ) 0.3077 0.2105 4.8270 ( 0 2 6) 0 0.9204 0.6312 13 19 ( 6519 2pth ) ( 4605 1odk_A) 0.8317 0.6432 4.0879 ( 2 33 55) 0 0.9081 0.7019 13 17 ( 6519 2pth ) ( 5179 1q1g_A) 0.8297 0.6078 4.6078 ( 2 32 55) 0 0.9064 0.6633 13 18 ( 6519 2pth ) ( 5416 1qq9_A) 0.3077 0.2667 6.6491 ( 0 4 6) 0 0.8324 0.7265 13 15 ( 6519 2pth ) ( 5543 1r3n_A) 0.3077 0.2222 4.7037 ( 0 4 6) 0 0.9221 0.6665 13 18 ( 6519 2pth ) ( 5701 1rtq_A) 0.3077 0.2667 7.1772 ( 0 3 6) 0 0.8444 0.7325 13 15 ( 6519 2pth ) ( 5724 1rxy_A) 0.8298 0.6078 4.3248 ( 2 32 55) 0 0.9066 0.6633 13 18 ( 6519 2pth ) ( 5727 1ryb_A) 0.9231 0.9999 1.4842 ( 0 46 66) 0 0.9231 0.9999 13 12 ( 6519 2pth ) ( 6225 1vgy_A) 0.3077 0.2222 4.4823 ( 0 2 6) 0 0.9219 0.6664 13 18 ( 6519 2pth ) ( 6233 1vhe_A) 0.3844 0.2631 9.0960 ( 0 4 10) 0 0.9224 0.6315 13 19 ( 6519 2pth ) ( 6240 1vho_A) 0.3792 0.2623 10.8189 ( 1 8 10) 0 0.9108 0.6297 13 19 ( 6519 2pth ) ( 6248 1vhw_A) 0.8317 0.6432 4.1683 ( 2 33 55) 0 0.9082 0.7019 13 17 ( 6519 2pth ) ( 6519 2pth ) 1.0000 1.0000 0.0000 ( 0 56 78) 0 1.0000 1.0000 13 13 -------------------------------------------------------------------------------------------------------------------------