------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 1619 1fsg_A) ( 31 1a3c ) 0.7843 0.9136 3.5949 ( 1 28 55) 0 0.7843 0.9136 14 12 ( 1619 1fsg_A) ( 497 1bzy_A) 0.9283 0.8664 2.0988 ( 1 51 78) 0 0.9283 0.8664 14 15 ( 1619 1fsg_A) ( 863 1dkr_A) 0.5641 0.6512 5.6318 ( 1 12 28) 0 0.5641 0.6512 14 12 ( 1619 1fsg_A) ( 864 1dkr_A) 0.5673 0.7137 5.9233 ( 1 14 28) 0 0.5673 0.7137 14 11 ( 1619 1fsg_A) ( 920 1dqn_A) 0.8285 0.6945 4.9828 ( 3 42 66) 0 0.8285 0.6945 14 17 ( 1619 1fsg_A) ( 1101 1ecf_A) 0.6177 0.6177 5.2639 ( 2 20 36) 0 0.6177 0.6177 14 14 ( 1619 1fsg_A) ( 1619 1fsg_A) 1.0000 1.0000 0.0000 ( 0 64 91) 0 1.0000 1.0000 14 14 ( 1619 1fsg_A) ( 1703 1g2q_A) 0.5000 0.5000 3.6010 ( 0 11 21) 0 0.5000 0.5000 14 14 ( 1619 1fsg_A) ( 2209 1hgx_A) 0.7843 0.9955 3.4329 ( 1 28 55) 0 0.7843 0.9955 14 11 ( 1619 1fsg_A) ( 2755 1j7j_A) 0.6898 0.8926 3.8694 ( 2 23 45) 0 0.6898 0.8926 14 10 ( 1619 1fsg_A) ( 2960 1jlr_A) 0.6427 0.5294 4.3754 ( 0 23 36) 0 0.6427 0.5294 14 17 ( 1619 1fsg_A) ( 3517 1l1q_A) 0.4999 0.4999 4.8385 ( 0 9 21) 0 0.5642 0.5642 14 14 ( 1619 1fsg_A) ( 3628 1lh0_A) 0.5709 0.5330 6.7859 ( 0 15 28) 0 0.5709 0.5330 14 15 ( 1619 1fsg_A) ( 4398 1nul_A) 0.6410 0.7460 4.3927 ( 1 20 36) 0 0.6410 0.7460 14 12 ( 1619 1fsg_A) ( 4494 1o57_A) 0.6427 0.7497 4.1945 ( 0 18 36) 0 0.7138 0.8322 14 12 ( 1619 1fsg_A) ( 4502 1o5o_A) 0.6404 0.5983 5.4749 ( 1 19 36) 0 0.6404 0.5983 14 15 ( 1619 1fsg_A) ( 5277 1qb7_A) 0.5661 0.4973 4.2888 ( 1 13 28) 0 0.5661 0.4973 14 16 ( 1619 1fsg_A) ( 5892 1tc1_A) 0.7847 0.9144 3.3121 ( 1 30 55) 0 0.7847 0.9144 14 12 -------------------------------------------------------------------------------------------------------------------------