------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 2037 1h1d_A) ( 115 1af7 ) 0.6874 0.6470 3.8366 ( 0 31 55) 0 0.6874 0.6470 16 17 ( 2037 1h1d_A) ( 439 1boo_A) 0.4372 0.3887 8.0505 ( 0 6 21) 0 0.8219 0.7466 16 18 ( 2037 1h1d_A) ( 800 1dct_A) 0.3750 0.3000 4.5875 ( 0 10 15) 0 0.8249 0.6821 16 20 ( 2037 1h1d_A) ( 869 1dl5_A) 0.5000 0.5000 3.0383 ( 0 17 28) 0 0.6874 0.6874 16 16 ( 2037 1h1d_A) ( 943 1dus_A) 0.7430 0.8436 3.3325 ( 2 34 66) 0 0.7430 0.8436 16 14 ( 2037 1h1d_A) ( 1179 1ej0_A) 0.7329 0.9357 3.9007 ( 2 27 66) 0 0.7484 0.9933 16 12 ( 2037 1h1d_A) ( 1384 1f3l_A) 0.5623 0.3600 5.7832 ( 0 17 36) 0 0.6867 0.4399 16 25 ( 2037 1h1d_A) ( 1596 1fp1_D) 0.7486 0.7486 6.2559 ( 0 36 66) 0 0.7486 0.7486 16 16 ( 2037 1h1d_A) ( 1598 1fp2_A) 0.7493 0.5998 5.1988 ( 0 42 66) 0 0.8112 0.6496 16 20 ( 2037 1h1d_A) ( 1708 1g38_A) 0.6764 0.3922 3.1130 ( 2 27 55) 0 0.6764 0.3922 16 28 ( 2037 1h1d_A) ( 1727 1g55_A) 0.4375 0.3500 3.9555 ( 0 8 21) 0 0.6272 0.5656 16 20 ( 2037 1h1d_A) ( 1737 1g60_A) 0.3749 0.4284 7.9254 ( 0 4 15) 0 0.8119 0.9275 16 14 ( 2037 1h1d_A) ( 1761 1g8a_A) 0.8089 0.7202 3.6229 ( 2 45 78) 0 0.8089 0.7202 16 18 ( 2037 1h1d_A) ( 2037 1h1d_A) 1.0000 1.0000 0.0000 ( 0 87 120) 0 1.0000 1.0000 16 16 ( 2037 1h1d_A) ( 2249 1hnn_A) 0.6763 0.6048 3.6399 ( 2 27 55) 0 0.6873 0.6146 16 18 ( 2037 1h1d_A) ( 2364 1i1n_A) 0.3748 0.3748 8.5552 ( 0 9 15) 0 0.6875 0.6875 16 16 ( 2037 1h1d_A) ( 2390 1i4w_A) 0.8102 0.5904 3.5403 ( 2 51 78) 0 0.8102 0.5904 16 22 ( 2037 1h1d_A) ( 2435 1i9g_A) 0.7888 0.5858 3.0976 ( 3 41 78) 0 0.8119 0.5908 16 22 ( 2037 1h1d_A) ( 2533 1im8_A) 0.8082 0.8082 3.4672 ( 2 43 78) 0 0.8082 0.8082 16 16 ( 2037 1h1d_A) ( 2545 1inl_A) 0.7865 0.5607 3.5884 ( 3 40 78) 0 0.7865 0.5607 16 23 ( 2037 1h1d_A) ( 2649 1ixk_A) 0.8118 0.5416 3.7590 ( 1 39 78) 0 0.8118 0.5416 16 24 ( 2037 1h1d_A) ( 2858 1jg1_A) 0.3748 0.4283 8.5679 ( 0 7 15) 0 0.7494 0.8560 16 14 ( 2037 1h1d_A) ( 3018 1jqe_A) 0.7474 0.5756 3.8757 ( 4 41 78) 0 0.8070 0.5898 16 22 ( 2037 1h1d_A) ( 3051 1jsx_A) 0.7683 0.8078 3.9513 ( 4 46 78) 0 0.7683 0.8078 16 15 ( 2037 1h1d_A) ( 3391 1kpg_A) 0.7370 0.6260 3.6856 ( 2 29 66) 0 0.7493 0.6479 16 19 ( 2037 1h1d_A) ( 3524 1l3i_A) 0.8070 0.9180 4.5760 ( 2 41 78) 0 0.8070 0.9180 16 14 ( 2037 1h1d_A) ( 3577 1l9k_A) 0.6698 0.6011 5.0136 ( 2 24 55) 0 0.6859 0.6102 16 18 ( 2037 1h1d_A) ( 3858 1m6e_X) 0.7236 0.6516 4.0594 ( 3 36 66) 0 0.7491 0.6662 16 18 ( 2037 1h1d_A) ( 3865 1m6y_A) 0.8121 0.8121 4.1401 ( 0 41 78) 0 0.8552 0.8552 16 16 ( 2037 1h1d_A) ( 3944 1mjf_A) 0.8062 0.5408 3.8498 ( 2 39 78) 0 0.8062 0.5408 16 24 ( 2037 1h1d_A) ( 4204 1ne2_A) 0.7566 0.8306 4.7309 ( 4 43 78) 0 0.8069 0.9179 16 14 ( 2037 1h1d_A) ( 4296 1nkv_A) 0.6913 0.6685 5.1239 ( 6 50 78) 0 0.6913 0.6685 16 17 ( 2037 1h1d_A) ( 4384 1nt2_A) 0.8082 0.7198 3.7427 ( 2 43 78) 0 0.8082 0.7198 16 18 ( 2037 1h1d_A) ( 4401 1nv8_A) 0.7500 0.6316 2.6696 ( 0 37 66) 0 0.8070 0.6819 16 19 ( 2037 1h1d_A) ( 4412 1nw3_A) 0.7567 0.6030 4.5120 ( 4 43 78) 0 0.7567 0.6030 16 21 ( 2037 1h1d_A) ( 4413 1nw6_A) 0.3750 0.3158 3.3174 ( 0 8 15) 0 0.8082 0.6824 16 19 ( 2037 1h1d_A) ( 4492 1o54_A) 0.7888 0.6419 3.0572 ( 3 41 78) 0 0.8115 0.6497 16 20 ( 2037 1h1d_A) ( 4567 1o9g_A) 0.7499 0.7999 2.9883 ( 0 34 66) 0 0.8086 0.8613 16 15 ( 2037 1h1d_A) ( 4860 1p1c_A) 0.7983 0.7983 3.2503 ( 3 47 78) 0 0.8045 0.8045 16 16 ( 2037 1h1d_A) ( 4936 1p91_A) 0.7492 0.6662 4.9981 ( 1 38 66) 0 0.7492 0.6662 16 18 ( 2037 1h1d_A) ( 5033 1pjz_A) 0.6592 0.6592 4.2625 ( 5 38 78) 0 0.8109 0.8109 16 16 ( 2037 1h1d_A) ( 5169 1q0s_A) 0.7499 0.7058 3.4356 ( 0 37 66) 0 0.7981 0.7540 16 17 ( 2037 1h1d_A) ( 5266 1qam_A) 0.7437 0.7437 3.6357 ( 2 35 66) 0 0.7915 0.7915 16 16 ( 2037 1h1d_A) ( 5509 1qzz_A) 0.7001 0.6087 2.9792 ( 4 40 66) 0 0.7494 0.6313 16 19 ( 2037 1h1d_A) ( 5639 1ri5_A) 0.5625 0.4500 3.0501 ( 0 13 36) 0 0.7494 0.6087 16 20 ( 2037 1h1d_A) ( 5650 1rjd_A) 0.8056 0.5895 3.6675 ( 2 38 78) 0 0.8085 0.6196 16 22 ( 2037 1h1d_A) ( 6005 1ufk_A) 0.8120 0.5416 3.3777 ( 1 40 78) 0 0.8120 0.5416 16 24 ( 2037 1h1d_A) ( 6027 1uir_A) 0.8068 0.5194 3.5864 ( 2 40 78) 0 0.8068 0.5194 16 25 ( 2037 1h1d_A) ( 6132 1uwv_A) 0.7495 0.4444 2.4650 ( 1 33 66) 0 0.7497 0.4758 16 27 ( 2037 1h1d_A) ( 6164 1v39 ) 0.4375 0.3889 3.8028 ( 0 5 21) 0 0.7326 0.6568 16 18 ( 2037 1h1d_A) ( 6352 1xva_A) 0.8559 0.7285 4.2860 ( 3 48 91) 0 0.8559 0.7285 16 19 ( 2037 1h1d_A) ( 6430 2dpm_A) 0.7781 0.7387 3.2476 ( 3 37 78) 0 0.7781 0.7387 16 17 ( 2037 1h1d_A) ( 6629 6mht_A) 0.3125 0.2500 3.6178 ( 0 6 10) 0 0.7321 0.5939 16 20 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