------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 943 1dus_A) ( 115 1af7 ) 0.7853 0.6469 4.4271 ( 0 32 55) 0 0.7853 0.6469 14 17 ( 943 1dus_A) ( 439 1boo_A) 0.4285 0.3333 6.0289 ( 0 9 15) 0 0.8570 0.6666 14 18 ( 943 1dus_A) ( 800 1dct_A) 0.5713 0.4000 4.5419 ( 0 13 28) 0 0.8568 0.5999 14 20 ( 943 1dus_A) ( 869 1dl5_A) 0.3571 0.3125 7.1343 ( 0 2 10) 0 0.8559 0.7494 14 16 ( 943 1dus_A) ( 943 1dus_A) 1.0000 1.0000 0.0000 ( 0 62 91) 0 1.0000 1.0000 14 14 ( 943 1dus_A) ( 1179 1ej0_A) 0.7856 0.9164 3.2370 ( 0 19 55) 0 0.7856 0.9164 14 12 ( 943 1dus_A) ( 1384 1f3l_A) 0.7467 0.4376 6.0651 ( 2 23 55) 0 0.7830 0.4398 14 25 ( 943 1dus_A) ( 1596 1fp1_D) 0.8562 0.7495 4.7826 ( 0 40 66) 0 0.8562 0.7495 14 16 ( 943 1dus_A) ( 1598 1fp2_A) 0.8568 0.5999 3.6578 ( 0 40 66) 0 0.8568 0.5999 14 20 ( 943 1dus_A) ( 1708 1g38_A) 0.7856 0.3929 2.9832 ( 0 22 55) 0 0.7856 0.3929 14 28 ( 943 1dus_A) ( 1727 1g55_A) 0.4285 0.3000 4.7001 ( 0 7 15) 0 0.7855 0.5500 14 20 ( 943 1dus_A) ( 1737 1g60_A) 0.4286 0.4286 3.4077 ( 0 8 15) 0 0.8570 0.8570 14 14 ( 943 1dus_A) ( 1761 1g8a_A) 0.8570 0.6666 2.8643 ( 0 36 66) 0 0.8570 0.6666 14 18 ( 943 1dus_A) ( 2037 1h1d_A) 0.8436 0.7430 3.3325 ( 2 34 66) 0 0.8557 0.7493 14 16 ( 943 1dus_A) ( 2249 1hnn_A) 0.7856 0.6111 3.2168 ( 0 29 55) 0 0.8564 0.6665 14 18 ( 943 1dus_A) ( 2364 1i1n_A) 0.4285 0.3750 5.4941 ( 0 7 15) 0 0.7856 0.6874 14 16 ( 943 1dus_A) ( 2390 1i4w_A) 0.8559 0.5453 4.0452 ( 1 35 66) 0 0.8559 0.5453 14 22 ( 943 1dus_A) ( 2435 1i9g_A) 0.8571 0.5454 2.6485 ( 0 33 66) 0 0.8571 0.5454 14 22 ( 943 1dus_A) ( 2533 1im8_A) 0.8571 0.7500 2.5919 ( 0 33 66) 0 0.8571 0.7500 14 16 ( 943 1dus_A) ( 2545 1inl_A) 0.9267 0.5651 5.1361 ( 0 44 78) 0 0.9741 0.6064 14 23 ( 943 1dus_A) ( 2649 1ixk_A) 0.9277 0.5416 3.3179 ( 1 42 78) 0 0.9277 0.5548 14 24 ( 943 1dus_A) ( 2858 1jg1_A) 0.7142 0.7142 3.4582 ( 0 21 45) 0 0.7856 0.7856 14 14 ( 943 1dus_A) ( 3018 1jqe_A) 0.8571 0.5454 2.5018 ( 0 37 66) 0 0.8571 0.5454 14 22 ( 943 1dus_A) ( 3051 1jsx_A) 0.8569 0.7999 3.2889 ( 0 39 66) 0 0.8569 0.7999 14 15 ( 943 1dus_A) ( 3391 1kpg_A) 0.8569 0.6315 3.4819 ( 0 32 66) 0 0.8569 0.6315 14 19 ( 943 1dus_A) ( 3524 1l3i_A) 0.8563 0.8563 4.6666 ( 0 35 66) 0 0.8563 0.8563 14 14 ( 943 1dus_A) ( 3577 1l9k_A) 0.7854 0.6110 3.9586 ( 0 20 55) 0 0.7854 0.6110 14 18 ( 943 1dus_A) ( 3858 1m6e_X) 0.8564 0.6665 4.5047 ( 0 36 66) 0 0.8564 0.6665 14 18 ( 943 1dus_A) ( 3865 1m6y_A) 0.8567 0.7498 4.0559 ( 0 32 66) 0 0.8567 0.7498 14 16 ( 943 1dus_A) ( 3944 1mjf_A) 0.8569 0.5000 3.5363 ( 0 37 66) 0 0.8569 0.5000 14 24 ( 943 1dus_A) ( 4204 1ne2_A) 0.8568 0.8568 3.6661 ( 0 34 66) 0 0.8568 0.8568 14 14 ( 943 1dus_A) ( 4296 1nkv_A) 0.8569 0.7058 3.3100 ( 0 35 66) 0 0.8569 0.7058 14 17 ( 943 1dus_A) ( 4384 1nt2_A) 0.8760 0.7058 3.7479 ( 3 39 78) 0 0.8760 0.7058 14 18 ( 943 1dus_A) ( 4401 1nv8_A) 0.9995 0.7367 3.3489 ( 0 56 91) 0 0.9995 0.7367 14 19 ( 943 1dus_A) ( 4412 1nw3_A) 0.7856 0.5238 3.4217 ( 0 31 55) 0 0.8553 0.5712 14 21 ( 943 1dus_A) ( 4413 1nw6_A) 0.4286 0.3158 3.0866 ( 0 8 15) 0 0.8570 0.6315 14 19 ( 943 1dus_A) ( 4492 1o54_A) 0.8570 0.6000 2.8303 ( 0 33 66) 0 0.8570 0.6000 14 20 ( 943 1dus_A) ( 4567 1o9g_A) 0.7855 0.7332 3.4805 ( 0 26 55) 0 0.8554 0.7988 14 15 ( 943 1dus_A) ( 4860 1p1c_A) 0.8568 0.7498 3.7872 ( 0 31 66) 0 0.8568 0.7498 14 16 ( 943 1dus_A) ( 4936 1p91_A) 0.7848 0.6108 5.3639 ( 0 29 55) 0 0.7848 0.6108 14 18 ( 943 1dus_A) ( 5033 1pjz_A) 0.8555 0.7492 4.1431 ( 1 32 66) 0 0.8555 0.7492 14 16 ( 943 1dus_A) ( 5169 1q0s_A) 0.8560 0.7054 3.6807 ( 1 34 66) 0 0.8560 0.7054 14 17 ( 943 1dus_A) ( 5266 1qam_A) 0.8569 0.7499 3.3135 ( 0 35 66) 0 0.8569 0.7499 14 16 ( 943 1dus_A) ( 5509 1qzz_A) 0.8571 0.6316 2.4670 ( 0 38 66) 0 0.8571 0.6316 14 19 ( 943 1dus_A) ( 5639 1ri5_A) 0.8570 0.6000 3.1863 ( 0 33 66) 0 0.8570 0.6000 14 20 ( 943 1dus_A) ( 5650 1rjd_A) 0.8569 0.5454 3.5856 ( 0 33 66) 0 0.8569 0.5454 14 22 ( 943 1dus_A) ( 6005 1ufk_A) 0.9992 0.5833 3.8471 ( 0 54 91) 0 0.9992 0.5833 14 24 ( 943 1dus_A) ( 6027 1uir_A) 0.8569 0.4800 3.5589 ( 0 36 66) 0 0.9759 0.5586 14 25 ( 943 1dus_A) ( 6132 1uwv_A) 0.9997 0.5185 2.8543 ( 0 54 91) 0 0.9997 0.5185 14 27 ( 943 1dus_A) ( 6164 1v39 ) 0.7142 0.5555 3.3692 ( 0 18 45) 0 0.7849 0.6109 14 18 ( 943 1dus_A) ( 6352 1xva_A) 0.8559 0.6313 3.7514 ( 1 34 66) 0 0.8559 0.6313 14 19 ( 943 1dus_A) ( 6430 2dpm_A) 0.8562 0.7055 3.2231 ( 1 35 66) 0 0.8562 0.7055 14 17 ( 943 1dus_A) ( 6629 6mht_A) 0.4285 0.3000 4.5980 ( 0 6 15) 0 0.7853 0.5499 14 20 -------------------------------------------------------------------------------------------------------------------------