------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 1325 1ezi_A) ( 1043 1e5k_A) 0.7058 0.9226 3.5985 ( 0 50 66) 0 0.7058 0.9226 17 13 ( 1325 1ezi_A) ( 1325 1ezi_A) 1.0000 1.0000 0.0000 ( 0 113 136) 0 1.0000 1.0000 17 17 ( 1325 1ezi_A) ( 1590 1fo8_A) 0.6468 0.4782 4.2079 ( 1 37 55) 0 0.7639 0.5650 17 23 ( 1325 1ezi_A) ( 1690 1g1l_A) 0.8146 0.6339 3.2553 ( 4 72 91) 0 0.8146 0.6339 17 22 ( 1325 1ezi_A) ( 1776 1g97_A) 0.8208 0.7353 3.7583 ( 3 75 91) 0 0.8208 0.7353 17 19 ( 1325 1ezi_A) ( 1787 1ga8_A) 0.7296 0.5348 5.3530 ( 5 57 78) 0 0.7296 0.5348 17 24 ( 1325 1ezi_A) ( 2122 1h7e_A) 0.8800 0.7134 2.8516 ( 3 83 105) 0 0.8800 0.7134 17 21 ( 1325 1ezi_A) ( 2402 1i52_A) 0.8817 0.9366 2.9756 ( 2 82 105) 0 0.8817 0.9366 17 16 ( 1325 1ezi_A) ( 3068 1jv1_A) 0.8200 0.4241 4.6435 ( 3 72 91) 0 0.8200 0.4241 17 33 ( 1325 1ezi_A) ( 3093 1jyk_A) 0.6992 0.6992 3.9680 ( 3 48 66) 0 0.6992 0.6992 17 17 ( 1325 1ezi_A) ( 3466 1kws_A) 0.5294 0.5294 4.3565 ( 0 26 36) 0 0.5328 0.5328 17 17 ( 1325 1ezi_A) ( 3651 1ll2_A) 0.6339 0.5713 4.5218 ( 3 36 55) 0 0.6339 0.5713 17 19 ( 1325 1ezi_A) ( 4544 1o7q_A) 0.5881 0.6248 5.0735 ( 0 28 45) 0 0.6456 0.6855 17 16 ( 1325 1ezi_A) ( 4719 1omz_A) 0.7070 0.6220 4.9429 ( 6 59 78) 0 0.7070 0.6220 17 20 ( 1325 1ezi_A) ( 5159 1pzt_A) 0.2941 0.3333 4.5860 ( 0 6 10) 0 0.5293 0.5998 17 15 ( 1325 1ezi_A) ( 5322 1qg8_A) 0.7056 0.6665 3.9333 ( 1 46 66) 0 0.7056 0.6665 17 18 ( 1325 1ezi_A) ( 5476 1qwj_A) 0.8202 0.9912 1.7438 ( 3 69 91) 0 0.8202 0.9912 17 14 ( 1325 1ezi_A) ( 5768 1s4n_A) 0.7034 0.4796 5.4697 ( 2 44 66) 0 0.7034 0.4796 17 25 ( 1325 1ezi_A) ( 6228 1vh3_A) 0.7561 0.6792 2.6971 ( 4 66 78) 0 0.7561 0.6792 17 19 -------------------------------------------------------------------------------------------------------------------------