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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:  
        HELIX min length: 5     STRAND min length: 3
        shift-tolerance = -10    permissible-violations = 4   max-breaks = NIL   retain-m = 100   best-n = 100
        anglethresh = 0.5    septhresh = 5   min_length = 4   rmsd-tol = 9.9999999999999E12

Legend:
( ix1 chain1 )  ( ix2 chain2 )   rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK   maxrho12 maxrho21  SS1 SS2

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( 1690 1g1l_A)  ( 1043 1e5k_A)     0.5819   0.9007   3.8639 (   5   59   78)   0     0.5819   0.9007   22  13
( 1690 1g1l_A)  ( 1325 1ezi_A)     0.6339   0.8146   3.2553 (   4   72   91)   0     0.6339   0.8146   22  17
( 1690 1g1l_A)  ( 1590 1fo8_A)     0.6774   0.6487   4.8004 (   4   69  105)   0     0.6774   0.6487   22  23
( 1690 1g1l_A)  ( 1690 1g1l_A)     1.0000   1.0000   0.0000 (   0  189  231)   0     1.0000   1.0000   22  22
( 1690 1g1l_A)  ( 1776 1g97_A)     0.7455   0.8416   2.7150 (   9  111  136)   0     0.7455   0.8416   22  19
( 1690 1g1l_A)  ( 1787 1ga8_A)     0.6800   0.6346   5.0259 (   9   88  120)   0     0.6800   0.6346   22  24
( 1690 1g1l_A)  ( 2122 1h7e_A)     0.7722   0.8089   2.8261 (   3  107  136)   0     0.7722   0.8089   22  21
( 1690 1g1l_A)  ( 2402 1i52_A)     0.6307   0.8487   3.3178 (   5   73   91)   0     0.6307   0.8487   22  16
( 1690 1g1l_A)  ( 3068 1jv1_A)     0.6222   0.4851   4.0905 (  15  107  136)   0     0.6974   0.5030   22  33
( 1690 1g1l_A)  ( 3093 1jyk_A)     0.7556   0.9432   3.7836 (   7   98  136)   0     0.7556   0.9432   22  17
( 1690 1g1l_A)  ( 3466 1kws_A)     0.3636   0.4706   3.8695 (   0   21   28)   0     0.4397   0.4928   22  17
( 1690 1g1l_A)  ( 3651 1ll2_A)     0.6301   0.6949   4.9236 (   8   70  105)   0     0.6301   0.7110   22  19
( 1690 1g1l_A)  ( 4544 1o7q_A)     0.5903   0.8097   4.1410 (   2   49   78)   0     0.5903   0.8097   22  16
( 1690 1g1l_A)  ( 4719 1omz_A)     0.6738   0.7372   4.1427 (   5   73  105)   0     0.6738   0.7372   22  20
( 1690 1g1l_A)  ( 5159 1pzt_A)     0.2727   0.4000   3.0076 (   0   11   15)   0     0.5298   0.7144   22  15
( 1690 1g1l_A)  ( 5322 1qg8_A)     0.6700   0.8027   4.4225 (   5   66  105)   0     0.6700   0.8027   22  18
( 1690 1g1l_A)  ( 5476 1qwj_A)     0.6086   0.8218   2.8845 (   7   67   91)   0     0.6086   0.8218   22  14
( 1690 1g1l_A)  ( 5768 1s4n_A)     0.5535   0.4990   4.8074 (   7   56   78)   0     0.6090   0.5449   22  25
( 1690 1g1l_A)  ( 6228 1vh3_A)     0.7257   0.8389   2.9709 (   4   97  120)   0     0.7257   0.8389   22  19

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