------------------------------------------------------------------------------------------------------------------------- Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity. Some relevant parameters: HELIX min length: 5 STRAND min length: 3 shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100 anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12 Legend: ( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2 ------------------------------------------------------------------------------------------------------------------------- ( 2402 1i52_A) ( 1043 1e5k_A) 0.7418 0.9007 3.1200 ( 3 49 66) 0 0.7418 0.9007 16 13 ( 2402 1i52_A) ( 1325 1ezi_A) 0.9366 0.8817 2.9756 ( 2 82 105) 0 0.9366 0.8817 16 17 ( 2402 1i52_A) ( 1590 1fo8_A) 0.7302 0.5183 4.7407 ( 4 52 66) 0 0.7963 0.5625 16 23 ( 2402 1i52_A) ( 1690 1g1l_A) 0.8487 0.6307 3.3178 ( 5 73 91) 0 0.8487 0.6307 16 22 ( 2402 1i52_A) ( 1776 1g97_A) 0.8651 0.7326 3.6959 ( 4 76 91) 0 0.8677 0.7337 16 19 ( 2402 1i52_A) ( 1787 1ga8_A) 0.7778 0.5367 5.6205 ( 5 62 78) 0 0.7778 0.5367 16 24 ( 2402 1i52_A) ( 2122 1h7e_A) 0.8721 0.6659 2.9766 ( 3 78 91) 0 0.8721 0.6659 16 21 ( 2402 1i52_A) ( 2402 1i52_A) 1.0000 1.0000 0.0000 ( 0 99 120) 0 1.0000 1.0000 16 16 ( 2402 1i52_A) ( 3068 1jv1_A) 0.8633 0.4239 4.9606 ( 4 74 91) 0 0.8652 0.4240 16 33 ( 2402 1i52_A) ( 3093 1jyk_A) 0.7063 0.6726 3.7517 ( 5 52 66) 0 0.7334 0.7033 16 17 ( 2402 1i52_A) ( 3466 1kws_A) 0.5000 0.4706 4.1174 ( 0 21 28) 0 0.5000 0.4706 16 17 ( 2402 1i52_A) ( 3651 1ll2_A) 0.6853 0.5780 3.5488 ( 2 41 55) 0 0.7395 0.6271 16 19 ( 2402 1i52_A) ( 4544 1o7q_A) 0.6874 0.6874 3.8641 ( 0 39 55) 0 0.7396 0.7396 16 16 ( 2402 1i52_A) ( 4719 1omz_A) 0.5350 0.5038 4.7270 ( 11 62 78) 0 0.6056 0.5038 16 20 ( 2402 1i52_A) ( 5159 1pzt_A) 0.3125 0.3333 4.1765 ( 0 7 10) 0 0.5625 0.5999 16 15 ( 2402 1i52_A) ( 5322 1qg8_A) 0.7479 0.6655 3.8884 ( 2 47 66) 0 0.7479 0.6655 16 18 ( 2402 1i52_A) ( 5476 1qwj_A) 0.8073 0.9186 2.6878 ( 3 61 78) 0 0.8100 0.9236 16 14 ( 2402 1i52_A) ( 5768 1s4n_A) 0.7953 0.5181 4.6508 ( 4 60 78) 0 0.7953 0.5181 16 25 ( 2402 1i52_A) ( 6228 1vh3_A) 0.7884 0.6736 2.6945 ( 5 68 78) 0 0.7884 0.6736 16 19 -------------------------------------------------------------------------------------------------------------------------