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Top-ranked similarities (based on backbone shifts), as measured by a combination of score and contiguity.
Some relevant parameters:
HELIX min length: 5 STRAND min length: 3
shift-tolerance = -10 permissible-violations = 4 max-breaks = NIL retain-m = 100 best-n = 100
anglethresh = 0.5 septhresh = 5 min_length = 4 rmsd-tol = 9.9999999999999E12
Legend:
( ix1 chain1 ) ( ix2 chain2 ) rho___12 rho___21 L2_ERROR (Xbad Xsig Xtot) BRK maxrho12 maxrho21 SS1 SS2
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( 3651 1ll2_A) ( 1043 1e5k_A) 0.5713 0.8005 3.4357 ( 3 36 55) 0 0.5721 0.8046 19 13
( 3651 1ll2_A) ( 1325 1ezi_A) 0.5713 0.6339 4.5218 ( 3 36 55) 0 0.5713 0.6339 19 17
( 3651 1ll2_A) ( 1590 1fo8_A) 0.6480 0.5687 3.8194 ( 7 57 91) 0 0.6480 0.5687 19 23
( 3651 1ll2_A) ( 1690 1g1l_A) 0.7110 0.6234 4.3980 ( 5 59 91) 0 0.7110 0.6301 19 22
( 3651 1ll2_A) ( 1776 1g97_A) 0.6363 0.6363 5.3075 ( 6 54 78) 0 0.6363 0.6363 19 19
( 3651 1ll2_A) ( 1787 1ga8_A) 0.8242 0.6836 2.8860 ( 9 102 136) 0 0.8242 0.6836 19 24
( 3651 1ll2_A) ( 2122 1h7e_A) 0.6306 0.5708 4.1043 ( 2 46 66) 0 0.6823 0.6179 19 21
( 3651 1ll2_A) ( 2402 1i52_A) 0.5850 0.6556 4.4170 ( 6 49 66) 0 0.5850 0.6853 19 16
( 3651 1ll2_A) ( 3068 1jv1_A) 0.6117 0.3623 6.9080 ( 4 42 66) 0 0.6303 0.3881 19 33
( 3651 1ll2_A) ( 3093 1jyk_A) 0.5196 0.5364 3.8307 ( 8 46 78) 0 0.5196 0.5364 19 17
( 3651 1ll2_A) ( 3466 1kws_A) 0.5789 0.6470 3.5087 ( 0 34 55) 0 0.5789 0.6470 19 17
( 3651 1ll2_A) ( 3651 1ll2_A) 1.0000 1.0000 0.0000 ( 0 139 171) 0 1.0000 1.0000 19 19
( 3651 1ll2_A) ( 4544 1o7q_A) 0.6314 0.7496 2.8990 ( 1 37 66) 0 0.6835 0.8107 19 16
( 3651 1ll2_A) ( 4719 1omz_A) 0.6089 0.5937 3.4138 ( 8 57 91) 0 0.6511 0.6238 19 20
( 3651 1ll2_A) ( 5159 1pzt_A) 0.3146 0.3962 3.8628 ( 1 9 15) 0 0.5260 0.6658 19 15
( 3651 1ll2_A) ( 5322 1qg8_A) 0.6839 0.7218 4.5257 ( 1 43 78) 0 0.6839 0.7218 19 18
( 3651 1ll2_A) ( 5476 1qwj_A) 0.5541 0.6930 4.2126 ( 4 35 55) 0 0.5694 0.7457 19 14
( 3651 1ll2_A) ( 5768 1s4n_A) 0.6707 0.5165 2.9611 ( 4 51 78) 0 0.6707 0.5165 19 25
( 3651 1ll2_A) ( 6228 1vh3_A) 0.6314 0.6314 4.6104 ( 0 47 66) 0 0.6314 0.6314 19 19
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